RNA–Protein interactions for RNA: ENST00000420746.1

TRIM39-206, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 708 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-206ENST00000420746 SYNPO2LQ9H987 977 aa8.35□□□□□ -1.07
TRIM39-206ENST00000420746 KCMF1Q9P0J7 381 aa8.35□□□□□ -1.07
TRIM39-206ENST00000420746 MYO1AQ9UBC5 1043 aa8.35□□□□□ -1.07
TRIM39-206ENST00000420746 SPRR3Q9UBC9 169 aa8.35□□□□□ -1.07
TRIM39-206ENST00000420746 DRG1Q9Y295 367 aaKnown RBP8.35□□□□□ -1.07
TRIM39-206ENST00000420746 HEY1Q9Y5J3 304 aa8.35□□□□□ -1.07
TRIM39-206ENST00000420746 USF3Q68DE3 2245 aa8.35□□□□□ -1.07
TRIM39-206ENST00000420746 ARHGAP21Q5T5U3 1957 aa8.34□□□□□ -1.07
TRIM39-206ENST00000420746 A0A1W2PPV9 198 aa8.34□□□□□ -1.07
TRIM39-206ENST00000420746 LRRD1A4D1F6 860 aa8.34□□□□□ -1.07
TRIM39-206ENST00000420746 OR2W5A6NFC9 320 aa8.34□□□□□ -1.07
TRIM39-206ENST00000420746 A8MVJ9 347 aa8.34□□□□□ -1.07
TRIM39-206ENST00000420746 SLC16A5O15375 505 aa8.34□□□□□ -1.07
TRIM39-206ENST00000420746 SIAH2O43255 324 aa8.34□□□□□ -1.07
TRIM39-206ENST00000420746 OR56A5P0C7T3 313 aa8.34□□□□□ -1.07
TRIM39-206ENST00000420746 EGR1P18146 543 aa8.34□□□□□ -1.07
TRIM39-206ENST00000420746 MC3RP41968 323 aa8.34□□□□□ -1.07
TRIM39-206ENST00000420746 ARHGAP25P42331 645 aa8.34□□□□□ -1.07
TRIM39-206ENST00000420746 CDKN1CP49918 316 aaPredicted RBP8.34□□□□□ -1.07
TRIM39-206ENST00000420746 SSR4P51571 173 aa8.34□□□□□ -1.07
TRIM39-206ENST00000420746 DBN1Q16643 649 aa8.34□□□□□ -1.07
TRIM39-206ENST00000420746 HSP90AA4PQ58FG1 418 aa8.34□□□□□ -1.07
TRIM39-206ENST00000420746 LIPNQ5VXI9 398 aa8.34□□□□□ -1.07
TRIM39-206ENST00000420746 NSUN5P2Q63ZY6 315 aa8.34□□□□□ -1.07
TRIM39-206ENST00000420746 ZNF425Q6IV72 752 aa8.34□□□□□ -1.07
TRIM39-206ENST00000420746 NEK11Q8NG66 645 aa8.34□□□□□ -1.07
TRIM39-206ENST00000420746 TSLPQ969D9 159 aa8.34□□□□□ -1.07
TRIM39-206ENST00000420746 KIAA1191Q96A73 305 aa8.34□□□□□ -1.07
TRIM39-206ENST00000420746 VAT1Q99536 393 aa8.34□□□□□ -1.07
TRIM39-206ENST00000420746 LANCL2Q9NS86 450 aa8.34□□□□□ -1.07
TRIM39-206ENST00000420746 HPF1Q9NWY4 346 aa8.34□□□□□ -1.07
TRIM39-206ENST00000420746 GALNT8Q9NY28 637 aa8.34□□□□□ -1.07
TRIM39-206ENST00000420746 PSD3Q9NYI0 1048 aa8.34□□□□□ -1.07
TRIM39-206ENST00000420746 TAB2Q9NYJ8 693 aa8.34□□□□□ -1.07
TRIM39-206ENST00000420746 ZNF226Q9NYT6 803 aa8.34□□□□□ -1.07
TRIM39-206ENST00000420746 SPATA7Q9P0W8 599 aa8.34□□□□□ -1.07
TRIM39-206ENST00000420746 ERVK-11Q9UQG0 969 aa8.34□□□□□ -1.07
TRIM39-206ENST00000420746 YARS2Q9Y2Z4 477 aaKnown RBP8.34□□□□□ -1.07
TRIM39-206ENST00000420746 RAI1Q7Z5J4 1906 aaPredicted RBP8.34□□□□□ -1.07
TRIM39-206ENST00000420746 IGKV1-8A0A0C4DH67 115 aa8.33□□□□□ -1.08
TRIM39-206ENST00000420746 ATP6AP2A0A1C7CYW4 349 aa8.33□□□□□ -1.08
TRIM39-206ENST00000420746 MBD3L3A6NE82 208 aaPredicted RBP8.33□□□□□ -1.08
TRIM39-206ENST00000420746 P2RX6O15547 441 aa8.33□□□□□ -1.08
TRIM39-206ENST00000420746 KIF5CO60282 957 aa8.33□□□□□ -1.08
TRIM39-206ENST00000420746 GPC4O75487 556 aa8.33□□□□□ -1.08
TRIM39-206ENST00000420746 ATP6AP2O75787 350 aa8.33□□□□□ -1.08
TRIM39-206ENST00000420746 TPM2P07951 284 aa8.33□□□□□ -1.08
TRIM39-206ENST00000420746 ZFXP17010 805 aaPredicted RBP8.33□□□□□ -1.08
TRIM39-206ENST00000420746 CNR1P21554 472 aa8.33□□□□□ -1.08
TRIM39-206ENST00000420746 CRYGSP22914 178 aa8.33□□□□□ -1.08
TRIM39-206ENST00000420746 SSR1P43307 286 aaKnown RBP8.33□□□□□ -1.08
TRIM39-206ENST00000420746 CLCN2P51788 898 aa8.33□□□□□ -1.08
TRIM39-206ENST00000420746 NR1H2P55055 460 aa8.33□□□□□ -1.08
TRIM39-206ENST00000420746 ADARP55265 1226 aaKnown RBP8.33□□□□□ -1.08
TRIM39-206ENST00000420746 TAP2Q03519 686 aa8.33□□□□□ -1.08
TRIM39-206ENST00000420746 WASHC5Q12768 1159 aa8.33□□□□□ -1.08
TRIM39-206ENST00000420746 MSLNQ13421 630 aaPredicted RBP8.33□□□□□ -1.08
TRIM39-206ENST00000420746 RANBP10Q6VN20 620 aa8.33□□□□□ -1.08
TRIM39-206ENST00000420746 TAS2R42Q7RTR8 314 aa8.33□□□□□ -1.08
TRIM39-206ENST00000420746 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.33□□□□□ -1.08
TRIM39-206ENST00000420746 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.33□□□□□ -1.08
TRIM39-206ENST00000420746 GOLM1Q8NBJ4 401 aa8.33□□□□□ -1.08
TRIM39-206ENST00000420746 APCDD1LQ8NCL9 501 aa8.33□□□□□ -1.08
TRIM39-206ENST00000420746 NFAM1Q8NET5 270 aaPredicted RBP8.33□□□□□ -1.08
TRIM39-206ENST00000420746 MBD3L2Q8NHZ7 208 aaPredicted RBP8.33□□□□□ -1.08
TRIM39-206ENST00000420746 ASZ1Q8WWH4 475 aa8.33□□□□□ -1.08
TRIM39-206ENST00000420746 WDR83Q9BRX9 315 aaKnown RBP8.33□□□□□ -1.08
TRIM39-206ENST00000420746 AARSD1Q9BTE6 412 aaKnown RBP8.33□□□□□ -1.08
TRIM39-206ENST00000420746 ISCUQ9H1K1 167 aa8.33□□□□□ -1.08
TRIM39-206ENST00000420746 EXO5Q9H790 373 aa8.33□□□□□ -1.08
TRIM39-206ENST00000420746 MRPS30Q9NP92 439 aaKnown RBP8.33□□□□□ -1.08
TRIM39-206ENST00000420746 SMARCAL1Q9NZC9 954 aa8.33□□□□□ -1.08
TRIM39-206ENST00000420746 C6orf203Q9P0P8 240 aaPredicted RBP8.33□□□□□ -1.08
TRIM39-206ENST00000420746 HCN3Q9P1Z3 774 aa8.33□□□□□ -1.08
TRIM39-206ENST00000420746 CIDEBQ9UHD4 219 aa8.33□□□□□ -1.08
TRIM39-206ENST00000420746 ANAPC7Q9UJX3 599 aa8.33□□□□□ -1.08
TRIM39-206ENST00000420746 MYO6Q9UM54 1294 aa8.33□□□□□ -1.08
TRIM39-206ENST00000420746 PRSS21Q9Y6M0 314 aa8.33□□□□□ -1.08
TRIM39-206ENST00000420746 TENM1Q9UKZ4 2725 aa8.33□□□□□ -1.08
TRIM39-206ENST00000420746 A0A0G2JMM0 328 aa8.32□□□□□ -1.08
TRIM39-206ENST00000420746 A0A1W2PPB8 328 aa8.32□□□□□ -1.08
TRIM39-206ENST00000420746 A0A1W2PRS3 328 aa8.32□□□□□ -1.08
TRIM39-206ENST00000420746 CD8B2A6NJW9 211 aa8.32□□□□□ -1.08
TRIM39-206ENST00000420746 KIR3DP1A8MWS1 328 aa8.32□□□□□ -1.08
TRIM39-206ENST00000420746 MYO1FO00160 1098 aa8.32□□□□□ -1.08
TRIM39-206ENST00000420746 ERN1O75460 977 aaKnown RBP8.32□□□□□ -1.08
TRIM39-206ENST00000420746 CELA3AP09093 270 aa8.32□□□□□ -1.08
TRIM39-206ENST00000420746 JAK1P23458 1154 aa8.32□□□□□ -1.08
TRIM39-206ENST00000420746 CCNFP41002 786 aa8.32□□□□□ -1.08
TRIM39-206ENST00000420746 HSPA14Q0VDF9 509 aa8.32□□□□□ -1.08
TRIM39-206ENST00000420746 TERF2Q15554 542 aa8.32□□□□□ -1.08
TRIM39-206ENST00000420746 TYSND1Q2T9J0 566 aa8.32□□□□□ -1.08
TRIM39-206ENST00000420746 TMEM214Q6NUQ4 689 aaKnown RBP8.32□□□□□ -1.08
TRIM39-206ENST00000420746 C12orf54Q6X4T0 127 aa8.32□□□□□ -1.08
TRIM39-206ENST00000420746 BZW1Q7L1Q6 419 aaKnown RBP8.32□□□□□ -1.08
TRIM39-206ENST00000420746 PRSS41Q7RTY9 318 aa8.32□□□□□ -1.08
TRIM39-206ENST00000420746 MILR1Q7Z6M3 343 aa8.32□□□□□ -1.08
TRIM39-206ENST00000420746 SLC26A11Q86WA9 606 aa8.32□□□□□ -1.08
TRIM39-206ENST00000420746 VRK3Q8IV63 474 aa8.32□□□□□ -1.08
TRIM39-206ENST00000420746 PIANPQ8IYJ0 282 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms