RNA–Protein interactions for RNA: ENST00000420138.5

GPC1-202, Transcript of glypican 1, humanhuman

TSL 5 BASIC

Gene GPC1, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-202ENST00000420138 PIM1P11309 404 aaPredicted RBP20.06■□□□□ 0.8
GPC1-202ENST00000420138 BCKDHBP21953 392 aa20.06■□□□□ 0.8
GPC1-202ENST00000420138 CD38P28907 300 aa20.06■□□□□ 0.8
GPC1-202ENST00000420138 SERPINB1P30740 379 aa20.06■□□□□ 0.8
GPC1-202ENST00000420138 KIR3DL1P43629 444 aa20.06■□□□□ 0.8
GPC1-202ENST00000420138 MTPNP58546 118 aa20.06■□□□□ 0.8
GPC1-202ENST00000420138 MRPS22P82650 360 aaKnown RBP20.06■□□□□ 0.8
GPC1-202ENST00000420138 SRSF11Q05519 484 aaKnown RBP20.06■□□□□ 0.8
GPC1-202ENST00000420138 DMWDQ09019 674 aa20.06■□□□□ 0.8
GPC1-202ENST00000420138 C1orf61Q13536 156 aa20.06■□□□□ 0.8
GPC1-202ENST00000420138 BLMHQ13867 455 aa20.06■□□□□ 0.8
GPC1-202ENST00000420138 FXNQ16595 210 aa20.06■□□□□ 0.8
GPC1-202ENST00000420138 DPY19L1Q2PZI1 675 aa20.06■□□□□ 0.8
GPC1-202ENST00000420138 IRGCQ6NXR0 463 aa20.06■□□□□ 0.8
GPC1-202ENST00000420138 MSANTD1Q6ZTZ1 278 aa20.06■□□□□ 0.8
GPC1-202ENST00000420138 CAMKMTQ7Z624 323 aa20.06■□□□□ 0.8
GPC1-202ENST00000420138 GPR180Q86V85 440 aa20.06■□□□□ 0.8
GPC1-202ENST00000420138 ANKRD46Q86W74 232 aa20.06■□□□□ 0.8
GPC1-202ENST00000420138 DCP2Q8IU60 420 aaKnown RBP20.06■□□□□ 0.8
GPC1-202ENST00000420138 OR8J3Q8NGG0 315 aa20.06■□□□□ 0.8
GPC1-202ENST00000420138 ZFPM2Q8WW38 1151 aa20.06■□□□□ 0.8
GPC1-202ENST00000420138 F2RL3Q96RI0 385 aa20.06■□□□□ 0.8
GPC1-202ENST00000420138 DPH7Q9BTV6 452 aa20.06■□□□□ 0.8
GPC1-202ENST00000420138 SARGQ9BW04 601 aa20.06■□□□□ 0.8
GPC1-202ENST00000420138 AICDAQ9GZX7 198 aa20.06■□□□□ 0.8
GPC1-202ENST00000420138 SRMSQ9H3Y6 488 aa20.06■□□□□ 0.8
GPC1-202ENST00000420138 ALG2Q9H553 416 aa20.06■□□□□ 0.8
GPC1-202ENST00000420138 IKZF5Q9H5V7 419 aa20.06■□□□□ 0.8
GPC1-202ENST00000420138 PRM3Q9NNZ6 103 aa20.06■□□□□ 0.8
GPC1-202ENST00000420138 GNG14A0A1W2PPG7 69 aa20.05■□□□□ 0.8
GPC1-202ENST00000420138 HAT1O14929 419 aa20.05■□□□□ 0.8
GPC1-202ENST00000420138 SEMA3DO95025 777 aa20.05■□□□□ 0.8
GPC1-202ENST00000420138 LAMP1P11279 417 aa20.05■□□□□ 0.8
GPC1-202ENST00000420138 TPP2P29144 1249 aaPredicted RBP20.05■□□□□ 0.8
GPC1-202ENST00000420138 BCL6P41182 706 aa20.05■□□□□ 0.8
GPC1-202ENST00000420138 CDKN2CP42773 168 aa20.05■□□□□ 0.8
GPC1-202ENST00000420138 RACK1P63244 317 aaKnown RBP20.05■□□□□ 0.8
GPC1-202ENST00000420138 ZNF763Q0D2J5 394 aa20.05■□□□□ 0.8
GPC1-202ENST00000420138 RUNDC3AQ59EK9 446 aa20.05■□□□□ 0.8
GPC1-202ENST00000420138 LPCAT4Q643R3 524 aa20.05■□□□□ 0.8
GPC1-202ENST00000420138 ANKRD26P1Q6NSI1 321 aa20.05■□□□□ 0.8
GPC1-202ENST00000420138 TSSK4Q6SA08 328 aa20.05■□□□□ 0.8
GPC1-202ENST00000420138 SLC36A4Q6YBV0 504 aa20.05■□□□□ 0.8
GPC1-202ENST00000420138 ADCK2Q7Z695 626 aa20.05■□□□□ 0.8
GPC1-202ENST00000420138 TAF8Q7Z7C8 310 aa20.05■□□□□ 0.8
GPC1-202ENST00000420138 IQCHQ86VS3 1027 aa20.05■□□□□ 0.8
GPC1-202ENST00000420138 TM9SF3Q9HD45 589 aa20.05■□□□□ 0.8
GPC1-202ENST00000420138 LHX9Q9NQ69 397 aa20.05■□□□□ 0.8
GPC1-202ENST00000420138 POT1Q9NUX5 634 aa20.05■□□□□ 0.8
GPC1-202ENST00000420138 CPNE7Q9UBL6 633 aa20.05■□□□□ 0.8
GPC1-202ENST00000420138 APOBEC3BQ9UH17 382 aaKnown RBP20.05■□□□□ 0.8
GPC1-202ENST00000420138 USP22Q9UPT9 525 aa20.05■□□□□ 0.8
GPC1-202ENST00000420138 KLHL20Q9Y2M5 609 aa20.05■□□□□ 0.8
GPC1-202ENST00000420138 FANCMQ8IYD8 2048 aa20.05■□□□□ 0.8
GPC1-202ENST00000420138 ABCA7Q8IZY2 2146 aa20.05■□□□□ 0.8
GPC1-202ENST00000420138 A0A096LPI6 279 aa20.04■□□□□ 0.8
GPC1-202ENST00000420138 ISM1B1AKI9 464 aa20.04■□□□□ 0.8
GPC1-202ENST00000420138 CSF2P04141 144 aa20.04■□□□□ 0.8
GPC1-202ENST00000420138 KLK1P06870 262 aa20.04■□□□□ 0.8
GPC1-202ENST00000420138 C8BP07358 591 aa20.04■□□□□ 0.8
GPC1-202ENST00000420138 COX7A2P14406 83 aa20.04■□□□□ 0.8
GPC1-202ENST00000420138 JUNDP17535 347 aa20.04■□□□□ 0.8
GPC1-202ENST00000420138 ATP6V1B2P21281 511 aa20.04■□□□□ 0.8
GPC1-202ENST00000420138 BLKP51451 505 aa20.04■□□□□ 0.8
GPC1-202ENST00000420138 KLC1Q07866 573 aa20.04■□□□□ 0.8
GPC1-202ENST00000420138 TRIP10Q15642 601 aa20.04■□□□□ 0.8
GPC1-202ENST00000420138 DNAJC14Q6Y2X3 702 aaPredicted RBP20.04■□□□□ 0.8
GPC1-202ENST00000420138 UBE3DQ7Z6J8 389 aa20.04■□□□□ 0.8
GPC1-202ENST00000420138 PTRH1Q86Y79 214 aaKnown RBP20.04■□□□□ 0.8
GPC1-202ENST00000420138 PDSS2Q86YH6 399 aa20.04■□□□□ 0.8
GPC1-202ENST00000420138 CDC26Q8NHZ8 85 aa20.04■□□□□ 0.8
GPC1-202ENST00000420138 SLC37A2Q8TED4 501 aa20.04■□□□□ 0.8
GPC1-202ENST00000420138 C16orf78Q8WTQ4 265 aa20.04■□□□□ 0.8
GPC1-202ENST00000420138 MIEF2Q96C03 454 aa20.04■□□□□ 0.8
GPC1-202ENST00000420138 COQ8BQ96D53 544 aa20.04■□□□□ 0.8
GPC1-202ENST00000420138 HSPA12BQ96MM6 686 aa20.04■□□□□ 0.8
GPC1-202ENST00000420138 PCDHB14Q9Y5E9 798 aa20.04■□□□□ 0.8
GPC1-202ENST00000420138 THADAQ6YHU6 1953 aa20.04■□□□□ 0.8
GPC1-202ENST00000420138 KIR2DS5A0A0G2JLQ3 304 aa20.04■□□□□ 0.8
GPC1-202ENST00000420138 A0A0G2JNG1 304 aa20.04■□□□□ 0.8
GPC1-202ENST00000420138 KIR2DS3K7RE56 304 aa20.04■□□□□ 0.8
GPC1-202ENST00000420138 PEX1O43933 1283 aa20.04■□□□□ 0.8
GPC1-202ENST00000420138 ERN1O75460 977 aaKnown RBP20.04■□□□□ 0.8
GPC1-202ENST00000420138 CLEC3AO75596 197 aa20.04■□□□□ 0.8
GPC1-202ENST00000420138 CTSEP14091 401 aa20.04■□□□□ 0.8
GPC1-202ENST00000420138 CMPK1P30085 196 aa20.04■□□□□ 0.8
GPC1-202ENST00000420138 BSGP35613 385 aa20.04■□□□□ 0.8
GPC1-202ENST00000420138 HNRNPFP52597 415 aaKnown RBP20.04■□□□□ 0.8
GPC1-202ENST00000420138 BNIP2Q12982 314 aa20.04■□□□□ 0.8
GPC1-202ENST00000420138 KIR2DS5Q14953 304 aa20.04■□□□□ 0.8
GPC1-202ENST00000420138 ZIC1Q15915 447 aa20.04■□□□□ 0.8
GPC1-202ENST00000420138 SPATA24Q86W54 205 aa20.04■□□□□ 0.8
GPC1-202ENST00000420138 TMEM126BQ8IUX1 230 aa20.04■□□□□ 0.8
GPC1-202ENST00000420138 DNAJB8Q8NHS0 232 aa20.04■□□□□ 0.8
GPC1-202ENST00000420138 ITCHQ96J02 903 aa20.04■□□□□ 0.8
GPC1-202ENST00000420138 RMND5AQ9H871 391 aa20.04■□□□□ 0.8
GPC1-202ENST00000420138 MYNNQ9NPC7 610 aa20.04■□□□□ 0.8
GPC1-202ENST00000420138 EGFL7Q9UHF1 273 aa20.04■□□□□ 0.8
GPC1-202ENST00000420138 ATP6V1HQ9UI12 483 aa20.04■□□□□ 0.8
GPC1-202ENST00000420138 TCRBV3S1A0A5B6 114 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms