RNA–Protein interactions for RNA: ENST00000420101.6

SEMA4D-204, Transcript of semaphorin 4D, humanhuman

TSL 1 (best) BASIC

Gene SEMA4D, Length 1,837 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-204ENST00000420101 MED16Q9Y2X0 877 aa14.28□□□□□ -0.12
SEMA4D-204ENST00000420101 STON1Q9Y6Q2 735 aa14.28□□□□□ -0.12
SEMA4D-204ENST00000420101 CDH23Q9H251 3354 aa14.28□□□□□ -0.12
SEMA4D-204ENST00000420101 OR2A25A4D2G3 310 aa14.27□□□□□ -0.12
SEMA4D-204ENST00000420101 FADS2P1A8MWK0 482 aa14.27□□□□□ -0.12
SEMA4D-204ENST00000420101 CAPN5O15484 640 aaPredicted RBP14.27□□□□□ -0.12
SEMA4D-204ENST00000420101 HS6ST1O60243 411 aa14.27□□□□□ -0.12
SEMA4D-204ENST00000420101 CRCPO75575 148 aa14.27□□□□□ -0.12
SEMA4D-204ENST00000420101 UGT2B17O75795 530 aa14.27□□□□□ -0.12
SEMA4D-204ENST00000420101 UROSP10746 265 aa14.27□□□□□ -0.12
SEMA4D-204ENST00000420101 CD6P30203 668 aa14.27□□□□□ -0.12
SEMA4D-204ENST00000420101 MMP12P39900 470 aa14.27□□□□□ -0.12
SEMA4D-204ENST00000420101 RGS4P49798 205 aa14.27□□□□□ -0.12
SEMA4D-204ENST00000420101 ARHGDIAP52565 204 aa14.27□□□□□ -0.12
SEMA4D-204ENST00000420101 UGT2B15P54855 530 aa14.27□□□□□ -0.12
SEMA4D-204ENST00000420101 IL5RAQ01344 420 aa14.27□□□□□ -0.12
SEMA4D-204ENST00000420101 HTR4Q13639 388 aa14.27□□□□□ -0.12
SEMA4D-204ENST00000420101 OR4D1Q15615 310 aa14.27□□□□□ -0.12
SEMA4D-204ENST00000420101 SETMARQ53H47 684 aaPredicted RBP14.27□□□□□ -0.12
SEMA4D-204ENST00000420101 FAM46CQ5VWP2 391 aa14.27□□□□□ -0.12
SEMA4D-204ENST00000420101 LIPIQ6XZB0 460 aa14.27□□□□□ -0.12
SEMA4D-204ENST00000420101 GDPD3Q7L5L3 318 aa14.27□□□□□ -0.12
SEMA4D-204ENST00000420101 TSPYL5Q86VY4 417 aaPredicted RBP14.27□□□□□ -0.12
SEMA4D-204ENST00000420101 KIAA1191Q96A73 305 aa14.27□□□□□ -0.12
SEMA4D-204ENST00000420101 SLC47A1Q96FL8 570 aa14.27□□□□□ -0.12
SEMA4D-204ENST00000420101 SMURF2Q9HAU4 748 aa14.27□□□□□ -0.12
SEMA4D-204ENST00000420101 DHRS7Q9Y394 339 aa14.27□□□□□ -0.12
SEMA4D-204ENST00000420101 PCDHGB2Q9Y5G2 931 aa14.27□□□□□ -0.12
SEMA4D-204ENST00000420101 LAMA3Q16787 3333 aa14.27□□□□□ -0.13
SEMA4D-204ENST00000420101 HMX3A6NHT5 357 aa14.27□□□□□ -0.13
SEMA4D-204ENST00000420101 NCF1BA6NI72 391 aaPredicted RBP14.27□□□□□ -0.13
SEMA4D-204ENST00000420101 NCF1CA8MVU1 366 aaPredicted RBP14.27□□□□□ -0.13
SEMA4D-204ENST00000420101 CDC7O00311 574 aa14.27□□□□□ -0.13
SEMA4D-204ENST00000420101 GSTA4O15217 222 aa14.27□□□□□ -0.13
SEMA4D-204ENST00000420101 LZTS3O60299 673 aaPredicted RBP14.27□□□□□ -0.13
SEMA4D-204ENST00000420101 RECQL5O94762 991 aaPredicted RBP14.27□□□□□ -0.13
SEMA4D-204ENST00000420101 MFN2O95140 757 aa14.27□□□□□ -0.13
SEMA4D-204ENST00000420101 MLYCDO95822 493 aa14.27□□□□□ -0.13
SEMA4D-204ENST00000420101 OR56A5P0C7T3 313 aa14.27□□□□□ -0.13
SEMA4D-204ENST00000420101 ADRB3P13945 408 aa14.27□□□□□ -0.13
SEMA4D-204ENST00000420101 NCF1P14598 390 aaPredicted RBP14.27□□□□□ -0.13
SEMA4D-204ENST00000420101 ITGA2P17301 1181 aa14.27□□□□□ -0.13
SEMA4D-204ENST00000420101 TGFBR2P37173 567 aa14.27□□□□□ -0.13
SEMA4D-204ENST00000420101 DCTP40126 519 aa14.27□□□□□ -0.13
SEMA4D-204ENST00000420101 CLCN7P51798 805 aa14.27□□□□□ -0.13
SEMA4D-204ENST00000420101 TSNQ15631 228 aaKnown RBP14.27□□□□□ -0.13
SEMA4D-204ENST00000420101 CCDC85BQ15834 202 aaPredicted RBP14.27□□□□□ -0.13
SEMA4D-204ENST00000420101 PFKFB4Q16877 469 aa14.27□□□□□ -0.13
SEMA4D-204ENST00000420101 CCDC58Q4VC31 144 aa14.27□□□□□ -0.13
SEMA4D-204ENST00000420101 SHQ1Q6PI26 577 aaKnown RBP14.27□□□□□ -0.13
SEMA4D-204ENST00000420101 TXNDC11Q6PKC3 985 aa14.27□□□□□ -0.13
SEMA4D-204ENST00000420101 VN1R5Q7Z5H4 357 aa14.27□□□□□ -0.13
SEMA4D-204ENST00000420101 BPHLQ86WA6 291 aaPredicted RBP14.27□□□□□ -0.13
SEMA4D-204ENST00000420101 GALNT12Q8IXK2 581 aa14.27□□□□□ -0.13
SEMA4D-204ENST00000420101 PARP16Q8N5Y8 322 aa14.27□□□□□ -0.13
SEMA4D-204ENST00000420101 PTGR2Q8N8N7 351 aaPredicted RBP14.27□□□□□ -0.13
SEMA4D-204ENST00000420101 Q8N9G6 341 aaPredicted RBP14.27□□□□□ -0.13
SEMA4D-204ENST00000420101 PDLIM5Q96HC4 596 aaKnown RBP14.27□□□□□ -0.13
SEMA4D-204ENST00000420101 TUBB1Q9H4B7 451 aa14.27□□□□□ -0.13
SEMA4D-204ENST00000420101 ACTR8Q9H981 624 aa14.27□□□□□ -0.13
SEMA4D-204ENST00000420101 DDX28Q9NUL7 540 aaKnown RBP14.27□□□□□ -0.13
SEMA4D-204ENST00000420101 ERVK-18Q9QC07 812 aa14.27□□□□□ -0.13
SEMA4D-204ENST00000420101 PRELID1Q9Y255 219 aa14.27□□□□□ -0.13
SEMA4D-204ENST00000420101 PCDHGB6Q9Y5F9 930 aa14.27□□□□□ -0.13
SEMA4D-204ENST00000420101 PCDHGA3Q9Y5H0 932 aa14.27□□□□□ -0.13
SEMA4D-204ENST00000420101 RANBP2P49792 3224 aaKnown RBP14.27□□□□□ -0.13
SEMA4D-204ENST00000420101 LOC105371267A0A1B0GV96 52 aa14.26□□□□□ -0.13
SEMA4D-204ENST00000420101 STX16O14662 325 aa14.26□□□□□ -0.13
SEMA4D-204ENST00000420101 WNT9AO14904 365 aa14.26□□□□□ -0.13
SEMA4D-204ENST00000420101 MTX2O75431 263 aa14.26□□□□□ -0.13
SEMA4D-204ENST00000420101 CD9P21926 228 aa14.26□□□□□ -0.13
SEMA4D-204ENST00000420101 KCNC1P48547 511 aa14.26□□□□□ -0.13
SEMA4D-204ENST00000420101 NKX2-5P52952 324 aaPredicted RBP14.26□□□□□ -0.13
SEMA4D-204ENST00000420101 PIGFQ07326 219 aa14.26□□□□□ -0.13
SEMA4D-204ENST00000420101 SPANXN2Q5MJ10 180 aa14.26□□□□□ -0.13
SEMA4D-204ENST00000420101 GPRC6AQ5T6X5 926 aa14.26□□□□□ -0.13
SEMA4D-204ENST00000420101 ANKS6Q68DC2 871 aa14.26□□□□□ -0.13
SEMA4D-204ENST00000420101 SDE2Q6IQ49 451 aa14.26□□□□□ -0.13
SEMA4D-204ENST00000420101 DLEU7Q6UYE1 221 aa14.26□□□□□ -0.13
SEMA4D-204ENST00000420101 MACC1Q6ZN28 852 aa14.26□□□□□ -0.13
SEMA4D-204ENST00000420101 ERN2Q76MJ5 926 aaKnown RBP14.26□□□□□ -0.13
SEMA4D-204ENST00000420101 B3GNT8Q7Z7M8 397 aa14.26□□□□□ -0.13
SEMA4D-204ENST00000420101 LIX1LQ8IVB5 337 aa14.26□□□□□ -0.13
SEMA4D-204ENST00000420101 MICU2Q8IYU8 434 aa14.26□□□□□ -0.13
SEMA4D-204ENST00000420101 TRAM1L1Q8N609 369 aa14.26□□□□□ -0.13
SEMA4D-204ENST00000420101 CXorf40AQ8TE69 158 aa14.26□□□□□ -0.13
SEMA4D-204ENST00000420101 AP2M1Q96CW1 435 aa14.26□□□□□ -0.13
SEMA4D-204ENST00000420101 SIGLEC11Q96RL6 698 aa14.26□□□□□ -0.13
SEMA4D-204ENST00000420101 ZSCAN5AQ9BUG6 496 aa14.26□□□□□ -0.13
SEMA4D-204ENST00000420101 NUAK2Q9H093 628 aa14.26□□□□□ -0.13
SEMA4D-204ENST00000420101 HEBP1Q9NRV9 189 aa14.26□□□□□ -0.13
SEMA4D-204ENST00000420101 B8ZZF3 427 aa14.25□□□□□ -0.13
SEMA4D-204ENST00000420101 AIREO43918 545 aa14.25□□□□□ -0.13
SEMA4D-204ENST00000420101 KERAO60938 352 aa14.25□□□□□ -0.13
SEMA4D-204ENST00000420101 PCSK2P16519 638 aa14.25□□□□□ -0.13
SEMA4D-204ENST00000420101 DGKAP23743 735 aa14.25□□□□□ -0.13
SEMA4D-204ENST00000420101 SOX6P35712 828 aa14.25□□□□□ -0.13
SEMA4D-204ENST00000420101 TNFRSF4P43489 277 aa14.25□□□□□ -0.13
SEMA4D-204ENST00000420101 DCDC1P59894 354 aa14.25□□□□□ -0.13
SEMA4D-204ENST00000420101 KHDRBS1Q07666 443 aaKnown RBP eCLIP14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms