RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 IGHV3-38A0A0C4DH36 116 aa3.59□□□□□ -1.83
HMGB1P49-201ENST00000418882 ASB14A6NK59 587 aa3.59□□□□□ -1.83
HMGB1P49-201ENST00000418882 MLNRO43193 412 aa3.59□□□□□ -1.83
HMGB1P49-201ENST00000418882 PPIP5K2O43314 1243 aa3.59□□□□□ -1.83
HMGB1P49-201ENST00000418882 FCGR3BO75015 233 aa3.59□□□□□ -1.83
HMGB1P49-201ENST00000418882 IGHV3-13P01766 116 aa3.59□□□□□ -1.83
HMGB1P49-201ENST00000418882 GBAP04062 536 aa3.59□□□□□ -1.83
HMGB1P49-201ENST00000418882 YES1P07947 543 aa3.59□□□□□ -1.83
HMGB1P49-201ENST00000418882 FAM58BPP0C7Q3 252 aa3.59□□□□□ -1.83
HMGB1P49-201ENST00000418882 DLATP10515 647 aaKnown RBP3.59□□□□□ -1.83
HMGB1P49-201ENST00000418882 MYL6BP14649 208 aa3.59□□□□□ -1.83
HMGB1P49-201ENST00000418882 KRT2P35908 639 aa3.59□□□□□ -1.83
HMGB1P49-201ENST00000418882 SULT2A1Q06520 285 aa3.59□□□□□ -1.83
HMGB1P49-201ENST00000418882 UGCGQ16739 394 aa3.59□□□□□ -1.83
HMGB1P49-201ENST00000418882 FAM106AQ4KMX7 169 aa3.59□□□□□ -1.83
HMGB1P49-201ENST00000418882 SPECC1Q5M775 1068 aa3.59□□□□□ -1.83
HMGB1P49-201ENST00000418882 PRSS55Q6UWB4 352 aaPredicted RBP3.59□□□□□ -1.83
HMGB1P49-201ENST00000418882 DHRS11Q6UWP2 260 aa3.59□□□□□ -1.83
HMGB1P49-201ENST00000418882 LCLAT1Q6UWP7 414 aa3.59□□□□□ -1.83
HMGB1P49-201ENST00000418882 C11orf57Q6ZUT1 292 aaPredicted RBP3.59□□□□□ -1.83
HMGB1P49-201ENST00000418882 ADCK2Q7Z695 626 aa3.59□□□□□ -1.83
HMGB1P49-201ENST00000418882 SLC47A2Q86VL8 602 aa3.59□□□□□ -1.83
HMGB1P49-201ENST00000418882 ABHD12Q8N2K0 398 aa3.59□□□□□ -1.83
HMGB1P49-201ENST00000418882 SSC4DQ8WTU2 575 aa3.59□□□□□ -1.83
HMGB1P49-201ENST00000418882 SIPA1Q96FS4 1042 aa3.59□□□□□ -1.83
HMGB1P49-201ENST00000418882 INTS14Q96SY0 518 aa3.59□□□□□ -1.83
HMGB1P49-201ENST00000418882 LGMNQ99538 433 aa3.59□□□□□ -1.83
HMGB1P49-201ENST00000418882 TRIM6Q9C030 488 aaPredicted RBP3.59□□□□□ -1.83
HMGB1P49-201ENST00000418882 C5orf66Q9H5L9 145 aa3.59□□□□□ -1.83
HMGB1P49-201ENST00000418882 CFDP1Q9UEE9 299 aaPredicted RBP3.59□□□□□ -1.83
HMGB1P49-201ENST00000418882 ANAPC5Q9UJX4 755 aa3.59□□□□□ -1.83
HMGB1P49-201ENST00000418882 SNX7Q9UNH6 387 aa3.59□□□□□ -1.83
HMGB1P49-201ENST00000418882 AGRNO00468 2067 aa3.59□□□□□ -1.83
HMGB1P49-201ENST00000418882 A8MVM7 634 aa3.58□□□□□ -1.84
HMGB1P49-201ENST00000418882 E5RGE8 158 aa3.58□□□□□ -1.84
HMGB1P49-201ENST00000418882 TFECO14948 347 aaPredicted RBP3.58□□□□□ -1.84
HMGB1P49-201ENST00000418882 FLRT2O43155 660 aa3.58□□□□□ -1.84
HMGB1P49-201ENST00000418882 TIMM44O43615 452 aa3.58□□□□□ -1.84
HMGB1P49-201ENST00000418882 KIF5CO60282 957 aa3.58□□□□□ -1.84
HMGB1P49-201ENST00000418882 SRSF10O75494 262 aaKnown RBP3.58□□□□□ -1.84
HMGB1P49-201ENST00000418882 LUC7L3O95232 432 aaKnown RBP3.58□□□□□ -1.84
HMGB1P49-201ENST00000418882 APOA4P06727 396 aa3.58□□□□□ -1.84
HMGB1P49-201ENST00000418882 ANKRD34CP0C6C1 535 aa3.58□□□□□ -1.84
HMGB1P49-201ENST00000418882 AOC1P19801 751 aa3.58□□□□□ -1.84
HMGB1P49-201ENST00000418882 SSTR1P30872 391 aa3.58□□□□□ -1.84
HMGB1P49-201ENST00000418882 TIA1P31483 386 aaKnown RBP eCLIP3.58□□□□□ -1.84
HMGB1P49-201ENST00000418882 FAM91A1Q658Y4 838 aa3.58□□□□□ -1.84
HMGB1P49-201ENST00000418882 TXNRD3NBQ6F5E7 133 aa3.58□□□□□ -1.84
HMGB1P49-201ENST00000418882 ZNF770Q6IQ21 691 aaPredicted RBP3.58□□□□□ -1.84
HMGB1P49-201ENST00000418882 C3P1Q6ZMU1 363 aa3.58□□□□□ -1.84
HMGB1P49-201ENST00000418882 PRUNE1Q86TP1 453 aa3.58□□□□□ -1.84
HMGB1P49-201ENST00000418882 FAM131BQ86XD5 332 aa3.58□□□□□ -1.84
HMGB1P49-201ENST00000418882 SLC22A15Q8IZD6 547 aa3.58□□□□□ -1.84
HMGB1P49-201ENST00000418882 LYG1Q8N1E2 194 aa3.58□□□□□ -1.84
HMGB1P49-201ENST00000418882 CASP10Q92851 521 aa3.58□□□□□ -1.84
HMGB1P49-201ENST00000418882 PDLIM5Q96HC4 596 aaKnown RBP3.58□□□□□ -1.84
HMGB1P49-201ENST00000418882 ALKBH7Q9BT30 221 aaPredicted RBP3.58□□□□□ -1.84
HMGB1P49-201ENST00000418882 RAB11FIP5Q9BXF6 653 aa3.58□□□□□ -1.84
HMGB1P49-201ENST00000418882 PA2G4Q9UQ80 394 aaKnown RBP3.58□□□□□ -1.84
HMGB1P49-201ENST00000418882 NSG2Q9Y328 171 aa3.58□□□□□ -1.84
HMGB1P49-201ENST00000418882 COLEC10Q9Y6Z7 277 aa3.58□□□□□ -1.84
HMGB1P49-201ENST00000418882 C5orf52A6NGY3 159 aa3.57□□□□□ -1.84
HMGB1P49-201ENST00000418882 A8MXK9 166 aa3.57□□□□□ -1.84
HMGB1P49-201ENST00000418882 EEF2P13639 858 aaKnown RBP3.57□□□□□ -1.84
HMGB1P49-201ENST00000418882 NAGLUP54802 743 aa3.57□□□□□ -1.84
HMGB1P49-201ENST00000418882 SLC8A3P57103 927 aa3.57□□□□□ -1.84
HMGB1P49-201ENST00000418882 IL10RBQ08334 325 aa3.57□□□□□ -1.84
HMGB1P49-201ENST00000418882 ZNF542PQ5EBM4 170 aa3.57□□□□□ -1.84
HMGB1P49-201ENST00000418882 SPANXN4Q5MJ08 99 aa3.57□□□□□ -1.84
HMGB1P49-201ENST00000418882 FAM46CQ5VWP2 391 aa3.57□□□□□ -1.84
HMGB1P49-201ENST00000418882 ZNF774Q6NX45 483 aa3.57□□□□□ -1.84
HMGB1P49-201ENST00000418882 FUT10Q6P4F1 479 aa3.57□□□□□ -1.84
HMGB1P49-201ENST00000418882 CROCCP3Q8IVE0 287 aa3.57□□□□□ -1.84
HMGB1P49-201ENST00000418882 DND1Q8IYX4 353 aaKnown RBP3.57□□□□□ -1.84
HMGB1P49-201ENST00000418882 OR4D10Q8NGI6 311 aa3.57□□□□□ -1.84
HMGB1P49-201ENST00000418882 OR10G7Q8NGN6 311 aa3.57□□□□□ -1.84
HMGB1P49-201ENST00000418882 RPLP0P6Q8NHW5 317 aa3.57□□□□□ -1.84
HMGB1P49-201ENST00000418882 SAP25Q8TEE9 199 aa3.57□□□□□ -1.84
HMGB1P49-201ENST00000418882 EXOC4Q96A65 974 aa3.57□□□□□ -1.84
HMGB1P49-201ENST00000418882 CCDC28BQ9BUN5 200 aa3.57□□□□□ -1.84
HMGB1P49-201ENST00000418882 AP1M1Q9BXS5 423 aa3.57□□□□□ -1.84
HMGB1P49-201ENST00000418882 IL1RAPQ9NPH3 570 aa3.57□□□□□ -1.84
HMGB1P49-201ENST00000418882 NLGN3Q9NZ94 848 aa3.57□□□□□ -1.84
HMGB1P49-201ENST00000418882 POLKQ9UBT6 870 aa3.57□□□□□ -1.84
HMGB1P49-201ENST00000418882 PILRAQ9UKJ1 303 aa3.57□□□□□ -1.84
HMGB1P49-201ENST00000418882 AGTPBP1Q9UPW5 1226 aa3.57□□□□□ -1.84
HMGB1P49-201ENST00000418882 ZHX2Q9Y6X8 837 aa3.57□□□□□ -1.84
HMGB1P49-201ENST00000418882 NPHP3Q7Z494 1330 aa3.56□□□□□ -1.84
HMGB1P49-201ENST00000418882 ACOD1A6NK06 481 aa3.56□□□□□ -1.84
HMGB1P49-201ENST00000418882 HMGB1P1B2RPK0 211 aaPredicted RBP3.56□□□□□ -1.84
HMGB1P49-201ENST00000418882 SHISA9B4DS77 424 aa3.56□□□□□ -1.84
HMGB1P49-201ENST00000418882 SELENOFO60613 162 aa3.56□□□□□ -1.84
HMGB1P49-201ENST00000418882 MT-ND2P03891 347 aa3.56□□□□□ -1.84
HMGB1P49-201ENST00000418882 ZFYP08048 801 aaPredicted RBP3.56□□□□□ -1.84
HMGB1P49-201ENST00000418882 C4BPBP20851 252 aa3.56□□□□□ -1.84
HMGB1P49-201ENST00000418882 COX8CQ7Z4L0 72 aa3.56□□□□□ -1.84
HMGB1P49-201ENST00000418882 GPR141Q7Z602 305 aa3.56□□□□□ -1.84
HMGB1P49-201ENST00000418882 P2RY8Q86VZ1 359 aa3.56□□□□□ -1.84
HMGB1P49-201ENST00000418882 CDC20BQ86Y33 519 aa3.56□□□□□ -1.84
HMGB1P49-201ENST00000418882 TDHQ8IZJ6 230 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms