RNA–Protein interactions for RNA: ENST00000417040.1

UBR4-205, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-205ENST00000417040 OR5M3Q8NGP4 307 aa11.68□□□□□ -0.54
UBR4-205ENST00000417040 OTUB2Q96DC9 234 aa11.68□□□□□ -0.54
UBR4-205ENST00000417040 NXPE2Q96DL1 559 aa11.68□□□□□ -0.54
UBR4-205ENST00000417040 MAELQ96JY0 434 aaKnown RBP11.68□□□□□ -0.54
UBR4-205ENST00000417040 DPEP2Q9H4A9 486 aa11.68□□□□□ -0.54
UBR4-205ENST00000417040 TAC3Q9UHF0 121 aa11.68□□□□□ -0.54
UBR4-205ENST00000417040 TTC34A8MYJ7 566 aa11.68□□□□□ -0.54
UBR4-205ENST00000417040 MPIP34949 423 aa11.68□□□□□ -0.54
UBR4-205ENST00000417040 FAM214AQ32MH5 1076 aa11.68□□□□□ -0.54
UBR4-205ENST00000417040 SUSD1Q6UWL2 747 aa11.68□□□□□ -0.54
UBR4-205ENST00000417040 BEND7Q8N7W2 519 aaPredicted RBP11.68□□□□□ -0.54
UBR4-205ENST00000417040 RDH12Q96NR8 316 aa11.68□□□□□ -0.54
UBR4-205ENST00000417040 TMEM185BQ9H7F4 350 aa11.68□□□□□ -0.54
UBR4-205ENST00000417040 TAS2R9Q9NYW1 312 aa11.68□□□□□ -0.54
UBR4-205ENST00000417040 CDC14AQ9UNH5 594 aa11.68□□□□□ -0.54
UBR4-205ENST00000417040 HS3ST4Q9Y661 456 aa11.68□□□□□ -0.54
UBR4-205ENST00000417040 WASH3PC4AMC7 463 aa11.68□□□□□ -0.54
UBR4-205ENST00000417040 RPL10P27635 214 aaKnown RBP11.68□□□□□ -0.54
UBR4-205ENST00000417040 MASP1P48740 699 aa11.68□□□□□ -0.54
UBR4-205ENST00000417040 EXOC3L2Q2M3D2 409 aa11.68□□□□□ -0.54
UBR4-205ENST00000417040 MBOAT1Q6ZNC8 495 aa11.68□□□□□ -0.54
UBR4-205ENST00000417040 COMMD7Q86VX2 200 aa11.68□□□□□ -0.54
UBR4-205ENST00000417040 ANKRD13BQ86YJ7 626 aa11.68□□□□□ -0.54
UBR4-205ENST00000417040 RFT1Q96AA3 541 aa11.68□□□□□ -0.54
UBR4-205ENST00000417040 SMOXQ9NWM0 555 aa11.68□□□□□ -0.54
UBR4-205ENST00000417040 BLOC1S5-TXNDC5H3BN57 136 aa11.68□□□□□ -0.54
UBR4-205ENST00000417040 DFNA5O60443 496 aa11.68□□□□□ -0.54
UBR4-205ENST00000417040 EDNRBP24530 442 aa11.68□□□□□ -0.54
UBR4-205ENST00000417040 FXYD6P3P58550 94 aa11.68□□□□□ -0.54
UBR4-205ENST00000417040 MTFR2Q6P444 385 aa11.68□□□□□ -0.54
UBR4-205ENST00000417040 SLC36A4Q6YBV0 504 aa11.68□□□□□ -0.54
UBR4-205ENST00000417040 ZNF227Q86WZ6 799 aa11.68□□□□□ -0.54
UBR4-205ENST00000417040 CMTR2Q8IYT2 770 aaKnown RBP11.68□□□□□ -0.54
UBR4-205ENST00000417040 PLEKHO2Q8TD55 490 aa11.68□□□□□ -0.54
UBR4-205ENST00000417040 DPH2Q9BQC3 489 aaPredicted RBP11.68□□□□□ -0.54
UBR4-205ENST00000417040 FUNDC2Q9BWH2 189 aa11.68□□□□□ -0.54
UBR4-205ENST00000417040 LHPPQ9H008 270 aa11.68□□□□□ -0.54
UBR4-205ENST00000417040 ADAM7Q9H2U9 754 aa11.68□□□□□ -0.54
UBR4-205ENST00000417040 DUS2Q9NX74 493 aaKnown RBP11.68□□□□□ -0.54
UBR4-205ENST00000417040 ZFR2Q9UPR6 939 aaKnown RBP11.68□□□□□ -0.54
UBR4-205ENST00000417040 SH2B3Q9UQQ2 575 aa11.68□□□□□ -0.54
UBR4-205ENST00000417040 CD2P06729 351 aa11.67□□□□□ -0.54
UBR4-205ENST00000417040 STSP08842 583 aa11.67□□□□□ -0.54
UBR4-205ENST00000417040 ALPPL2P10696 532 aa11.67□□□□□ -0.54
UBR4-205ENST00000417040 HSD11B1P28845 292 aa11.67□□□□□ -0.54
UBR4-205ENST00000417040 CILP2Q8IUL8 1156 aa11.67□□□□□ -0.54
UBR4-205ENST00000417040 MARVELD2Q8N4S9 558 aa11.67□□□□□ -0.54
UBR4-205ENST00000417040 RASGEF1AQ8N9B8 481 aa11.67□□□□□ -0.54
UBR4-205ENST00000417040 OR52E4Q8NGH9 312 aa11.67□□□□□ -0.54
UBR4-205ENST00000417040 NRG4Q8WWG1 115 aa11.67□□□□□ -0.54
UBR4-205ENST00000417040 ZUFSPQ96AP4 578 aa11.67□□□□□ -0.54
UBR4-205ENST00000417040 C7orf34Q96L11 122 aa11.67□□□□□ -0.54
UBR4-205ENST00000417040 MAPKAP1Q9BPZ7 522 aa11.67□□□□□ -0.54
UBR4-205ENST00000417040 NSUN3Q9H649 340 aaKnown RBP11.67□□□□□ -0.54
UBR4-205ENST00000417040 PCDHGB7Q9Y5F8 929 aa11.67□□□□□ -0.54
UBR4-205ENST00000417040 H7C2Y5 167 aa11.67□□□□□ -0.54
UBR4-205ENST00000417040 CLDN4O14493 209 aa11.67□□□□□ -0.54
UBR4-205ENST00000417040 CHRNA1P02708 482 aa11.67□□□□□ -0.54
UBR4-205ENST00000417040 MT-ND2P03891 347 aa11.67□□□□□ -0.54
UBR4-205ENST00000417040 HTR7P34969 479 aa11.67□□□□□ -0.54
UBR4-205ENST00000417040 SOX2P48431 317 aa11.67□□□□□ -0.54
UBR4-205ENST00000417040 TUBA3CQ13748 450 aa11.67□□□□□ -0.54
UBR4-205ENST00000417040 DSG2Q14126 1118 aa11.67□□□□□ -0.54
UBR4-205ENST00000417040 FUT10Q6P4F1 479 aa11.67□□□□□ -0.54
UBR4-205ENST00000417040 TMEM130Q8N3G9 435 aa11.67□□□□□ -0.54
UBR4-205ENST00000417040 Q8N402 240 aa11.67□□□□□ -0.54
UBR4-205ENST00000417040 OR51G2Q8NGK0 314 aa11.67□□□□□ -0.54
UBR4-205ENST00000417040 DNAJB8Q8NHS0 232 aa11.67□□□□□ -0.54
UBR4-205ENST00000417040 ZNF420Q8TAQ5 688 aaPredicted RBP11.67□□□□□ -0.54
UBR4-205ENST00000417040 TLR6Q9Y2C9 796 aa11.67□□□□□ -0.54
UBR4-205ENST00000417040 PRORSD1PA6NEY8 169 aa11.67□□□□□ -0.54
UBR4-205ENST00000417040 GRPRP30550 384 aa11.67□□□□□ -0.54
UBR4-205ENST00000417040 CCR8P51685 355 aa11.67□□□□□ -0.54
UBR4-205ENST00000417040 LRRC32Q14392 662 aa11.67□□□□□ -0.54
UBR4-205ENST00000417040 CCBE1Q6UXH8 406 aaPredicted RBP11.67□□□□□ -0.54
UBR4-205ENST00000417040 GALNT10Q86SR1 603 aa11.67□□□□□ -0.54
UBR4-205ENST00000417040 CEP97Q8IW35 865 aa11.67□□□□□ -0.54
UBR4-205ENST00000417040 SLC30A8Q8IWU4 369 aa11.67□□□□□ -0.54
UBR4-205ENST00000417040 CCDC54Q8NEL0 328 aa11.67□□□□□ -0.54
UBR4-205ENST00000417040 MTMR10Q9NXD2 777 aa11.67□□□□□ -0.54
UBR4-205ENST00000417040 DNMT3AQ9Y6K1 912 aaPredicted RBP11.67□□□□□ -0.54
UBR4-205ENST00000417040 TACSTD2P09758 323 aa11.67□□□□□ -0.54
UBR4-205ENST00000417040 RPL35P42766 123 aaKnown RBP11.67□□□□□ -0.54
UBR4-205ENST00000417040 DUSP28Q4G0W2 176 aa11.67□□□□□ -0.54
UBR4-205ENST00000417040 LRRC66Q68CR7 880 aa11.67□□□□□ -0.54
UBR4-205ENST00000417040 TIFABQ6ZNK6 161 aa11.67□□□□□ -0.54
UBR4-205ENST00000417040 GPR135Q8IZ08 494 aa11.67□□□□□ -0.54
UBR4-205ENST00000417040 ANKFN1Q8N957 763 aa11.67□□□□□ -0.54
UBR4-205ENST00000417040 CPNE2Q96FN4 548 aaPredicted RBP11.67□□□□□ -0.54
UBR4-205ENST00000417040 KLHL33A6NCF5 533 aa11.67□□□□□ -0.54
UBR4-205ENST00000417040 ERI3O43414 337 aaKnown RBP11.67□□□□□ -0.54
UBR4-205ENST00000417040 CNTN5O94779 1100 aa11.67□□□□□ -0.54
UBR4-205ENST00000417040 FARS2O95363 451 aaKnown RBP11.67□□□□□ -0.54
UBR4-205ENST00000417040 GNG2P59768 71 aa11.67□□□□□ -0.54
UBR4-205ENST00000417040 ID2Q02363 134 aa11.67□□□□□ -0.54
UBR4-205ENST00000417040 ZNF45Q02386 682 aa11.67□□□□□ -0.54
UBR4-205ENST00000417040 CEACAM7Q14002 265 aa11.67□□□□□ -0.54
UBR4-205ENST00000417040 CLCA4Q14CN2 919 aa11.67□□□□□ -0.54
UBR4-205ENST00000417040 NDUFA9Q16795 377 aa11.67□□□□□ -0.54
UBR4-205ENST00000417040 C6orf141Q5SZD1 244 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms