RNA–Protein interactions for RNA: ENST00000416649.6

NCKIPSD-204, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-204ENST00000416649 MAN2A2P49641 1150 aa14.2□□□□□ -0.14
NCKIPSD-204ENST00000416649 SUOXP51687 545 aa14.2□□□□□ -0.14
NCKIPSD-204ENST00000416649 MGAT3Q09327 533 aa14.2□□□□□ -0.14
NCKIPSD-204ENST00000416649 MAB21L1Q13394 359 aa14.2□□□□□ -0.14
NCKIPSD-204ENST00000416649 GTF2H2Q13888 395 aa14.2□□□□□ -0.14
NCKIPSD-204ENST00000416649 TRIQKQ629K1 86 aa14.2□□□□□ -0.14
NCKIPSD-204ENST00000416649 GTF2H2CQ6P1K8 395 aa14.2□□□□□ -0.14
NCKIPSD-204ENST00000416649 ATCAYQ86WG3 371 aa14.2□□□□□ -0.14
NCKIPSD-204ENST00000416649 ATP6V1C2Q8NEY4 427 aa14.2□□□□□ -0.14
NCKIPSD-204ENST00000416649 SPPL2AQ8TCT8 520 aa14.2□□□□□ -0.14
NCKIPSD-204ENST00000416649 TM9SF2Q99805 663 aa14.2□□□□□ -0.14
NCKIPSD-204ENST00000416649 RLIMQ9NVW2 624 aa14.2□□□□□ -0.14
NCKIPSD-204ENST00000416649 GPRC5BQ9NZH0 403 aa14.2□□□□□ -0.14
NCKIPSD-204ENST00000416649 E9PAM4 449 aa14.2□□□□□ -0.14
NCKIPSD-204ENST00000416649 RFXANKO14593 260 aa14.2□□□□□ -0.14
NCKIPSD-204ENST00000416649 RGS14O43566 566 aa14.2□□□□□ -0.14
NCKIPSD-204ENST00000416649 ESR1P03372 595 aa14.2□□□□□ -0.14
NCKIPSD-204ENST00000416649 CLEC2LP0C7M8 214 aa14.2□□□□□ -0.14
NCKIPSD-204ENST00000416649 ZNF30P17039 623 aa14.2□□□□□ -0.14
NCKIPSD-204ENST00000416649 IL2P60568 153 aa14.2□□□□□ -0.14
NCKIPSD-204ENST00000416649 HNRNPA0Q13151 305 aaKnown RBP14.2□□□□□ -0.14
NCKIPSD-204ENST00000416649 SV2CQ496J9 727 aa14.2□□□□□ -0.14
NCKIPSD-204ENST00000416649 USP39Q53GS9 565 aaKnown RBP14.2□□□□□ -0.14
NCKIPSD-204ENST00000416649 ZBTB37Q5TC79 503 aa14.2□□□□□ -0.14
NCKIPSD-204ENST00000416649 TMEM65Q6PI78 240 aa14.2□□□□□ -0.14
NCKIPSD-204ENST00000416649 XKRXQ6PP77 449 aa14.2□□□□□ -0.14
NCKIPSD-204ENST00000416649 ANKS3Q6ZW76 656 aa14.2□□□□□ -0.14
NCKIPSD-204ENST00000416649 ZNF367Q7RTV3 350 aa14.2□□□□□ -0.14
NCKIPSD-204ENST00000416649 ZZZ3Q8IYH5 903 aa14.2□□□□□ -0.14
NCKIPSD-204ENST00000416649 SLC34A3Q8N130 599 aa14.2□□□□□ -0.14
NCKIPSD-204ENST00000416649 SLC5A8Q8N695 610 aa14.2□□□□□ -0.14
NCKIPSD-204ENST00000416649 OR52E4Q8NGH9 312 aa14.2□□□□□ -0.14
NCKIPSD-204ENST00000416649 CDC26Q8NHZ8 85 aa14.2□□□□□ -0.14
NCKIPSD-204ENST00000416649 PSMG2Q969U7 264 aa14.2□□□□□ -0.14
NCKIPSD-204ENST00000416649 TMEM80Q96HE8 168 aa14.2□□□□□ -0.14
NCKIPSD-204ENST00000416649 CRISPLD1Q9H336 500 aa14.2□□□□□ -0.14
NCKIPSD-204ENST00000416649 PRM3Q9NNZ6 103 aa14.2□□□□□ -0.14
NCKIPSD-204ENST00000416649 TMEM184CQ9NVA4 438 aa14.2□□□□□ -0.14
NCKIPSD-204ENST00000416649 RANBP2P49792 3224 aaKnown RBP14.2□□□□□ -0.14
NCKIPSD-204ENST00000416649 VPS26AO75436 327 aa14.19□□□□□ -0.14
NCKIPSD-204ENST00000416649 PSIP1O75475 530 aaKnown RBP14.19□□□□□ -0.14
NCKIPSD-204ENST00000416649 HMBSP08397 361 aa14.19□□□□□ -0.14
NCKIPSD-204ENST00000416649 CPN2P22792 545 aa14.19□□□□□ -0.14
NCKIPSD-204ENST00000416649 MAP2K3P46734 347 aa14.19□□□□□ -0.14
NCKIPSD-204ENST00000416649 CLCN7P51798 805 aa14.19□□□□□ -0.14
NCKIPSD-204ENST00000416649 ABHD18Q0P651 414 aa14.19□□□□□ -0.14
NCKIPSD-204ENST00000416649 EEF1AKMT2Q5JPI9 291 aaKnown RBP14.19□□□□□ -0.14
NCKIPSD-204ENST00000416649 CIR1Q86X95 450 aaPredicted RBP14.19□□□□□ -0.14
NCKIPSD-204ENST00000416649 CALHM3Q86XJ0 350 aa14.19□□□□□ -0.14
NCKIPSD-204ENST00000416649 NKAPQ8N5F7 415 aaKnown RBP14.19□□□□□ -0.14
NCKIPSD-204ENST00000416649 SLC37A3Q8NCC5 494 aa14.19□□□□□ -0.14
NCKIPSD-204ENST00000416649 HMCESQ96FZ2 354 aa14.19□□□□□ -0.14
NCKIPSD-204ENST00000416649 CRELD1Q96HD1 420 aa14.19□□□□□ -0.14
NCKIPSD-204ENST00000416649 MAGEB10Q96LZ2 347 aaPredicted RBP14.19□□□□□ -0.14
NCKIPSD-204ENST00000416649 SEMA3CQ99985 751 aa14.19□□□□□ -0.14
NCKIPSD-204ENST00000416649 ZNF226Q9NYT6 803 aa14.19□□□□□ -0.14
NCKIPSD-204ENST00000416649 LOC102723532A0A0G2JNH3 316 aa14.19□□□□□ -0.14
NCKIPSD-204ENST00000416649 OR7A17O14581 309 aa14.19□□□□□ -0.14
NCKIPSD-204ENST00000416649 MYL12BO14950 172 aa14.19□□□□□ -0.14
NCKIPSD-204ENST00000416649 HOXB8P17481 243 aaPredicted RBP14.19□□□□□ -0.14
NCKIPSD-204ENST00000416649 MYL12AP19105 171 aa14.19□□□□□ -0.14
NCKIPSD-204ENST00000416649 APEX1P27695 318 aaKnown RBP14.19□□□□□ -0.14
NCKIPSD-204ENST00000416649 HLA-DMAP28067 261 aa14.19□□□□□ -0.14
NCKIPSD-204ENST00000416649 KDELR2P33947 212 aa14.19□□□□□ -0.14
NCKIPSD-204ENST00000416649 GNPDA1P46926 289 aa14.19□□□□□ -0.14
NCKIPSD-204ENST00000416649 INPP1P49441 399 aa14.19□□□□□ -0.14
NCKIPSD-204ENST00000416649 GALEQ14376 348 aa14.19□□□□□ -0.14
NCKIPSD-204ENST00000416649 DSC3Q14574 896 aa14.19□□□□□ -0.14
NCKIPSD-204ENST00000416649 DEFB115Q30KQ5 88 aa14.19□□□□□ -0.14
NCKIPSD-204ENST00000416649 SPDYE7PQ495Y7 208 aa14.19□□□□□ -0.14
NCKIPSD-204ENST00000416649 LCN1P1Q5VSP4 162 aa14.19□□□□□ -0.14
NCKIPSD-204ENST00000416649 ANKRD54Q6NXT1 300 aa14.19□□□□□ -0.14
NCKIPSD-204ENST00000416649 ZNF621Q6ZSS3 439 aa14.19□□□□□ -0.14
NCKIPSD-204ENST00000416649 SERINC5Q86VE9 423 aa14.19□□□□□ -0.14
NCKIPSD-204ENST00000416649 COMMD7Q86VX2 200 aa14.19□□□□□ -0.14
NCKIPSD-204ENST00000416649 PGAP3Q96FM1 320 aaPredicted RBP14.19□□□□□ -0.14
NCKIPSD-204ENST00000416649 CDKN2AIPNLQ96HQ2 116 aa14.19□□□□□ -0.14
NCKIPSD-204ENST00000416649 EGFL8Q99944 293 aa14.19□□□□□ -0.14
NCKIPSD-204ENST00000416649 APOL5Q9BWW9 433 aa14.19□□□□□ -0.14
NCKIPSD-204ENST00000416649 LRTM1Q9HBL6 345 aa14.19□□□□□ -0.14
NCKIPSD-204ENST00000416649 AP3M1Q9Y2T2 418 aa14.19□□□□□ -0.14
NCKIPSD-204ENST00000416649 MMP2P08253 660 aa14.18□□□□□ -0.14
NCKIPSD-204ENST00000416649 ZNF284Q2VY69 593 aa14.18□□□□□ -0.14
NCKIPSD-204ENST00000416649 LRRC66Q68CR7 880 aa14.18□□□□□ -0.14
NCKIPSD-204ENST00000416649 FAHD1Q6P587 224 aa14.18□□□□□ -0.14
NCKIPSD-204ENST00000416649 CCDC149Q6ZUS6 474 aa14.18□□□□□ -0.14
NCKIPSD-204ENST00000416649 OR6C4Q8NGE1 309 aa14.18□□□□□ -0.14
NCKIPSD-204ENST00000416649 AKAP1Q92667 903 aaKnown RBP eCLIP14.18□□□□□ -0.14
NCKIPSD-204ENST00000416649 RIT1Q92963 219 aa14.18□□□□□ -0.14
NCKIPSD-204ENST00000416649 GTPBP3Q969Y2 492 aaKnown RBP14.18□□□□□ -0.14
NCKIPSD-204ENST00000416649 IL4I1Q96RQ9 567 aa14.18□□□□□ -0.14
NCKIPSD-204ENST00000416649 NSUN3Q9H649 340 aaKnown RBP14.18□□□□□ -0.14
NCKIPSD-204ENST00000416649 POPDC3Q9HBV1 291 aa14.18□□□□□ -0.14
NCKIPSD-204ENST00000416649 RPS6KA6Q9UK32 745 aa14.18□□□□□ -0.14
NCKIPSD-204ENST00000416649 NDRG2Q9UN36 371 aaKnown RBP14.18□□□□□ -0.14
NCKIPSD-204ENST00000416649 NEU3Q9UQ49 428 aa14.18□□□□□ -0.14
NCKIPSD-204ENST00000416649 PRG3Q9Y2Y8 225 aaPredicted RBP14.18□□□□□ -0.14
NCKIPSD-204ENST00000416649 UPK3BL1B0FP48 263 aa14.18□□□□□ -0.14
NCKIPSD-204ENST00000416649 UPK3BL2E5RIL1 263 aa14.18□□□□□ -0.14
NCKIPSD-204ENST00000416649 TNFRSF11BO00300 401 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms