RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 DIDO1Q9BTC0 2240 aaKnown RBP16.6■□□□□ 0.25
PDLIM2-208ENST00000416159 FAM95CA0A1B0GW59 222 aa16.59■□□□□ 0.25
PDLIM2-208ENST00000416159 A1L4Q6 167 aa16.59■□□□□ 0.25
PDLIM2-208ENST00000416159 NDUFS4O43181 175 aa16.59■□□□□ 0.25
PDLIM2-208ENST00000416159 SEC24DO94855 1032 aaPredicted RBP16.59■□□□□ 0.25
PDLIM2-208ENST00000416159 ALOX12P18054 663 aa16.59■□□□□ 0.25
PDLIM2-208ENST00000416159 SAT1P21673 171 aa16.59■□□□□ 0.25
PDLIM2-208ENST00000416159 AHRP35869 848 aa16.59■□□□□ 0.25
PDLIM2-208ENST00000416159 RGS1Q08116 209 aa16.59■□□□□ 0.25
PDLIM2-208ENST00000416159 CBLBQ13191 982 aa16.59■□□□□ 0.25
PDLIM2-208ENST00000416159 BTBD16Q32M84 506 aa16.59■□□□□ 0.25
PDLIM2-208ENST00000416159 CATSPEREQ5SY80 951 aa16.59■□□□□ 0.25
PDLIM2-208ENST00000416159 MAMDC2Q7Z304 686 aaPredicted RBP16.59■□□□□ 0.25
PDLIM2-208ENST00000416159 ANKRD37Q7Z713 158 aa16.59■□□□□ 0.25
PDLIM2-208ENST00000416159 SUN3Q8TAQ9 357 aa16.59■□□□□ 0.25
PDLIM2-208ENST00000416159 NT5CQ8TCD5 201 aa16.59■□□□□ 0.25
PDLIM2-208ENST00000416159 NEIL2Q969S2 332 aa16.59■□□□□ 0.25
PDLIM2-208ENST00000416159 VPS39Q96JC1 886 aa16.59■□□□□ 0.25
PDLIM2-208ENST00000416159 ZNF354BQ96LW1 612 aa16.59■□□□□ 0.25
PDLIM2-208ENST00000416159 MAGEB10Q96LZ2 347 aaPredicted RBP16.59■□□□□ 0.25
PDLIM2-208ENST00000416159 SLX1AQ9BQ83 275 aa16.59■□□□□ 0.25
PDLIM2-208ENST00000416159 PELI2Q9HAT8 420 aa16.59■□□□□ 0.25
PDLIM2-208ENST00000416159 ZFP69BQ9UJL9 534 aa16.59■□□□□ 0.25
PDLIM2-208ENST00000416159 CPAMD8Q8IZJ3 1885 aa16.59■□□□□ 0.25
PDLIM2-208ENST00000416159 IGHV3-20A0A0C4DH32 117 aa16.58■□□□□ 0.24
PDLIM2-208ENST00000416159 OR5H15A6NDH6 313 aa16.58■□□□□ 0.24
PDLIM2-208ENST00000416159 URADA6NGE7 173 aa16.58■□□□□ 0.24
PDLIM2-208ENST00000416159 TP73O15350 636 aa16.58■□□□□ 0.24
PDLIM2-208ENST00000416159 GALR3O60755 368 aaPredicted RBP16.58■□□□□ 0.24
PDLIM2-208ENST00000416159 SERPIND1P05546 499 aa16.58■□□□□ 0.24
PDLIM2-208ENST00000416159 RPL21P46778 160 aaKnown RBP16.58■□□□□ 0.24
PDLIM2-208ENST00000416159 SCTRP47872 440 aa16.58■□□□□ 0.24
PDLIM2-208ENST00000416159 TAS2R39P59534 338 aa16.58■□□□□ 0.24
PDLIM2-208ENST00000416159 CDKL1Q00532 357 aa16.58■□□□□ 0.24
PDLIM2-208ENST00000416159 ACTN3Q08043 901 aaPredicted RBP16.58■□□□□ 0.24
PDLIM2-208ENST00000416159 EXT1Q16394 746 aa16.58■□□□□ 0.24
PDLIM2-208ENST00000416159 PPP1R3AQ16821 1122 aa16.58■□□□□ 0.24
PDLIM2-208ENST00000416159 ZNF324BQ6AW86 544 aaPredicted RBP16.58■□□□□ 0.24
PDLIM2-208ENST00000416159 THOC6Q86W42 341 aaKnown RBP16.58■□□□□ 0.24
PDLIM2-208ENST00000416159 SHISA5Q8N114 240 aa16.58■□□□□ 0.24
PDLIM2-208ENST00000416159 ZNF740Q8NDX6 193 aa16.58■□□□□ 0.24
PDLIM2-208ENST00000416159 M1APQ8TC57 530 aa16.58■□□□□ 0.24
PDLIM2-208ENST00000416159 MOCOSQ96EN8 888 aa16.58■□□□□ 0.24
PDLIM2-208ENST00000416159 PEX11GQ96HA9 241 aa16.58■□□□□ 0.24
PDLIM2-208ENST00000416159 KRT12Q99456 494 aa16.58■□□□□ 0.24
PDLIM2-208ENST00000416159 AIF1LQ9BQI0 150 aa16.58■□□□□ 0.24
PDLIM2-208ENST00000416159 CLK4Q9HAZ1 481 aaKnown RBP16.58■□□□□ 0.24
PDLIM2-208ENST00000416159 LANCL2Q9NS86 450 aa16.58■□□□□ 0.24
PDLIM2-208ENST00000416159 IKZF3Q9UKT9 509 aa16.58■□□□□ 0.24
PDLIM2-208ENST00000416159 OSGIN2Q9Y236 505 aa16.58■□□□□ 0.24
PDLIM2-208ENST00000416159 SNX24Q9Y343 169 aa16.58■□□□□ 0.24
PDLIM2-208ENST00000416159 KCNE2Q9Y6J6 123 aa16.58■□□□□ 0.24
PDLIM2-208ENST00000416159 OR2W5A6NFC9 320 aa16.57■□□□□ 0.24
PDLIM2-208ENST00000416159 ZNF860A6NHJ4 632 aa16.57■□□□□ 0.24
PDLIM2-208ENST00000416159 A8MUI8 341 aa16.57■□□□□ 0.24
PDLIM2-208ENST00000416159 MAGEB17A8MXT2 336 aa16.57■□□□□ 0.24
PDLIM2-208ENST00000416159 CDC7O00311 574 aa16.57■□□□□ 0.24
PDLIM2-208ENST00000416159 F10P00742 488 aa16.57■□□□□ 0.24
PDLIM2-208ENST00000416159 PER3P56645 1201 aa16.57■□□□□ 0.24
PDLIM2-208ENST00000416159 REEP5Q00765 189 aa16.57■□□□□ 0.24
PDLIM2-208ENST00000416159 RHAGQ02094 409 aa16.57■□□□□ 0.24
PDLIM2-208ENST00000416159 ZNF33BQ06732 778 aa16.57■□□□□ 0.24
PDLIM2-208ENST00000416159 FASTKD3Q14CZ7 662 aaKnown RBP16.57■□□□□ 0.24
PDLIM2-208ENST00000416159 NSDHLQ15738 373 aa16.57■□□□□ 0.24
PDLIM2-208ENST00000416159 SFT2D3Q587I9 215 aa16.57■□□□□ 0.24
PDLIM2-208ENST00000416159 H3F3CQ6NXT2 135 aa16.57■□□□□ 0.24
PDLIM2-208ENST00000416159 NXPE4Q6UWF7 544 aa16.57■□□□□ 0.24
PDLIM2-208ENST00000416159 ABHD13Q7L211 337 aa16.57■□□□□ 0.24
PDLIM2-208ENST00000416159 ZBED8Q8IZ13 594 aa16.57■□□□□ 0.24
PDLIM2-208ENST00000416159 TRPV3Q8NET8 790 aa16.57■□□□□ 0.24
PDLIM2-208ENST00000416159 DNAJB8Q8NHS0 232 aa16.57■□□□□ 0.24
PDLIM2-208ENST00000416159 NR4A3Q92570 626 aa16.57■□□□□ 0.24
PDLIM2-208ENST00000416159 TBC1D20Q96BZ9 403 aa16.57■□□□□ 0.24
PDLIM2-208ENST00000416159 PDLIM2Q96JY6 352 aa16.57■□□□□ 0.24
PDLIM2-208ENST00000416159 TAAR6Q96RI8 345 aa16.57■□□□□ 0.24
PDLIM2-208ENST00000416159 LPAR4Q99677 370 aa16.57■□□□□ 0.24
PDLIM2-208ENST00000416159 SPNS1Q9H2V7 528 aa16.57■□□□□ 0.24
PDLIM2-208ENST00000416159 RHOJQ9H4E5 214 aa16.57■□□□□ 0.24
PDLIM2-208ENST00000416159 KCNK13Q9HB14 408 aa16.57■□□□□ 0.24
PDLIM2-208ENST00000416159 POPDC3Q9HBV1 291 aa16.57■□□□□ 0.24
PDLIM2-208ENST00000416159 CTNNAL1Q9UBT7 734 aa16.57■□□□□ 0.24
PDLIM2-208ENST00000416159 OARD1Q9Y530 152 aa16.57■□□□□ 0.24
PDLIM2-208ENST00000416159 DOPEY1Q5JWR5 2465 aa16.57■□□□□ 0.24
PDLIM2-208ENST00000416159 NPEPPSL1A6NEC2 478 aa16.56■□□□□ 0.24
PDLIM2-208ENST00000416159 FAM187AA6NFU0 413 aa16.56■□□□□ 0.24
PDLIM2-208ENST00000416159 LRRTM2O43300 516 aa16.56■□□□□ 0.24
PDLIM2-208ENST00000416159 CHST10O43529 356 aa16.56■□□□□ 0.24
PDLIM2-208ENST00000416159 CRYABP02511 175 aaKnown RBP16.56■□□□□ 0.24
PDLIM2-208ENST00000416159 FHP07954 510 aa16.56■□□□□ 0.24
PDLIM2-208ENST00000416159 JAK1P23458 1154 aa16.56■□□□□ 0.24
PDLIM2-208ENST00000416159 HNMTP50135 292 aa16.56■□□□□ 0.24
PDLIM2-208ENST00000416159 SLC12A2P55011 1212 aa16.56■□□□□ 0.24
PDLIM2-208ENST00000416159 ABRAXAS2Q15018 415 aa16.56■□□□□ 0.24
PDLIM2-208ENST00000416159 DEFB134Q4QY38 66 aa16.56■□□□□ 0.24
PDLIM2-208ENST00000416159 PAPD4Q6PIY7 484 aaKnown RBP16.56■□□□□ 0.24
PDLIM2-208ENST00000416159 ADAMTSL2Q86TH1 951 aa16.56■□□□□ 0.24
PDLIM2-208ENST00000416159 AMER2Q8N7J2 671 aa16.56■□□□□ 0.24
PDLIM2-208ENST00000416159 OR5T3Q8NGG3 340 aa16.56■□□□□ 0.24
PDLIM2-208ENST00000416159 PYROXD1Q8WU10 500 aa16.56■□□□□ 0.24
PDLIM2-208ENST00000416159 TSNARE1Q96NA8 513 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms