RNA–Protein interactions for RNA: ENST00000414781.1

RAPGEF1-204, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-204ENST00000414781 PABPN1LA6NDY0 278 aaKnown RBP12.9□□□□□ -0.34
RAPGEF1-204ENST00000414781 MATN2O00339 956 aa12.9□□□□□ -0.34
RAPGEF1-204ENST00000414781 IFRD1O00458 451 aaPredicted RBP12.9□□□□□ -0.34
RAPGEF1-204ENST00000414781 TM9SF1O15321 606 aa12.9□□□□□ -0.34
RAPGEF1-204ENST00000414781 PRPF4O43172 522 aaKnown RBP eCLIP12.9□□□□□ -0.34
RAPGEF1-204ENST00000414781 WISP3O95389 354 aaPredicted RBP12.9□□□□□ -0.34
RAPGEF1-204ENST00000414781 RPN2P04844 631 aa12.9□□□□□ -0.34
RAPGEF1-204ENST00000414781 UMODP07911 640 aa12.9□□□□□ -0.34
RAPGEF1-204ENST00000414781 CDH3P22223 829 aa12.9□□□□□ -0.34
RAPGEF1-204ENST00000414781 MMP11P24347 488 aa12.9□□□□□ -0.34
RAPGEF1-204ENST00000414781 PBLDP30039 288 aaPredicted RBP12.9□□□□□ -0.34
RAPGEF1-204ENST00000414781 ARG2P78540 354 aa12.9□□□□□ -0.34
RAPGEF1-204ENST00000414781 DCDP81605 110 aaKnown RBP12.9□□□□□ -0.34
RAPGEF1-204ENST00000414781 PRKAA1Q13131 559 aa12.9□□□□□ -0.34
RAPGEF1-204ENST00000414781 CSHL1Q14406 222 aa12.9□□□□□ -0.34
RAPGEF1-204ENST00000414781 GBX1Q14549 363 aa12.9□□□□□ -0.34
RAPGEF1-204ENST00000414781 PCOLCEQ15113 449 aa12.9□□□□□ -0.34
RAPGEF1-204ENST00000414781 CDSNQ15517 529 aa12.9□□□□□ -0.34
RAPGEF1-204ENST00000414781 RPE65Q16518 533 aa12.9□□□□□ -0.34
RAPGEF1-204ENST00000414781 CCDC153Q494R4 210 aa12.9□□□□□ -0.34
RAPGEF1-204ENST00000414781 TTC23LQ6PF05 361 aa12.9□□□□□ -0.34
RAPGEF1-204ENST00000414781 SH2D5Q6ZV89 423 aa12.9□□□□□ -0.34
RAPGEF1-204ENST00000414781 TMEM200AQ86VY9 491 aa12.9□□□□□ -0.34
RAPGEF1-204ENST00000414781 CPNE9Q8IYJ1 553 aa12.9□□□□□ -0.34
RAPGEF1-204ENST00000414781 SLC22A15Q8IZD6 547 aa12.9□□□□□ -0.34
RAPGEF1-204ENST00000414781 C4orf33Q8N1A6 199 aa12.9□□□□□ -0.34
RAPGEF1-204ENST00000414781 BANPQ8N9N5 519 aa12.9□□□□□ -0.34
RAPGEF1-204ENST00000414781 CATSPER1Q8NEC5 780 aa12.9□□□□□ -0.34
RAPGEF1-204ENST00000414781 STAG3L4Q8TBR4 150 aa12.9□□□□□ -0.34
RAPGEF1-204ENST00000414781 MAGEC3Q8TD91 643 aa12.9□□□□□ -0.34
RAPGEF1-204ENST00000414781 ADAMTS18Q8TE60 1221 aa12.9□□□□□ -0.34
RAPGEF1-204ENST00000414781 EEF1AKMT1Q8WVE0 214 aa12.9□□□□□ -0.34
RAPGEF1-204ENST00000414781 SKA2Q8WVK7 121 aaPredicted RBP12.9□□□□□ -0.34
RAPGEF1-204ENST00000414781 ZBTB9Q96C00 473 aa12.9□□□□□ -0.34
RAPGEF1-204ENST00000414781 LINGO1Q96FE5 620 aa12.9□□□□□ -0.34
RAPGEF1-204ENST00000414781 APOPT1Q96IL0 206 aa12.9□□□□□ -0.34
RAPGEF1-204ENST00000414781 MAGED4Q96JG8 741 aa12.9□□□□□ -0.34
RAPGEF1-204ENST00000414781 TRIM54Q9BYV2 358 aa12.9□□□□□ -0.34
RAPGEF1-204ENST00000414781 TFB2MQ9H5Q4 396 aaKnown RBP12.9□□□□□ -0.34
RAPGEF1-204ENST00000414781 NKIRAS1Q9NYS0 192 aa12.9□□□□□ -0.34
RAPGEF1-204ENST00000414781 GALPQ9UBC7 116 aa12.9□□□□□ -0.34
RAPGEF1-204ENST00000414781 MID2Q9UJV3 735 aa12.9□□□□□ -0.34
RAPGEF1-204ENST00000414781 WDR37Q9Y2I8 494 aa12.9□□□□□ -0.34
RAPGEF1-204ENST00000414781 PCM1Q15154 2024 aa12.89□□□□□ -0.35
RAPGEF1-204ENST00000414781 NCOA6Q14686 2063 aaPredicted RBP12.89□□□□□ -0.35
RAPGEF1-204ENST00000414781 SYCE1LA8MT33 242 aa12.89□□□□□ -0.35
RAPGEF1-204ENST00000414781 SLC16A5O15375 505 aa12.89□□□□□ -0.35
RAPGEF1-204ENST00000414781 ZBTB14O43829 449 aa12.89□□□□□ -0.35
RAPGEF1-204ENST00000414781 ZWINTO95229 277 aa12.89□□□□□ -0.35
RAPGEF1-204ENST00000414781 C8GP07360 202 aa12.89□□□□□ -0.35
RAPGEF1-204ENST00000414781 SLC35G4P0C7Q5 338 aa12.89□□□□□ -0.35
RAPGEF1-204ENST00000414781 ZNF460Q14592 562 aa12.89□□□□□ -0.35
RAPGEF1-204ENST00000414781 C3AR1Q16581 482 aa12.89□□□□□ -0.35
RAPGEF1-204ENST00000414781 TTMPQ5BVD1 217 aa12.89□□□□□ -0.35
RAPGEF1-204ENST00000414781 ACSBG2Q5FVE4 666 aa12.89□□□□□ -0.35
RAPGEF1-204ENST00000414781 RHBDD2Q6NTF9 364 aa12.89□□□□□ -0.35
RAPGEF1-204ENST00000414781 LINC00696Q6ZRV3 163 aa12.89□□□□□ -0.35
RAPGEF1-204ENST00000414781 MTERF4Q7Z6M4 381 aaKnown RBP12.89□□□□□ -0.35
RAPGEF1-204ENST00000414781 ADAMTSL2Q86TH1 951 aa12.89□□□□□ -0.35
RAPGEF1-204ENST00000414781 RHEBL1Q8TAI7 183 aa12.89□□□□□ -0.35
RAPGEF1-204ENST00000414781 LKAAEAR1Q8TD35 194 aa12.89□□□□□ -0.35
RAPGEF1-204ENST00000414781 NAT14Q8WUY8 206 aa12.89□□□□□ -0.35
RAPGEF1-204ENST00000414781 SCYL1Q96KG9 808 aa12.89□□□□□ -0.35
RAPGEF1-204ENST00000414781 MRPL57Q9BQC6 102 aaKnown RBP12.89□□□□□ -0.35
RAPGEF1-204ENST00000414781 CNOT10Q9H9A5 744 aaKnown RBP12.89□□□□□ -0.35
RAPGEF1-204ENST00000414781 POMT2Q9UKY4 750 aa12.89□□□□□ -0.35
RAPGEF1-204ENST00000414781 TMCO1Q9UM00 188 aa12.89□□□□□ -0.35
RAPGEF1-204ENST00000414781 MEMO1Q9Y316 297 aa12.89□□□□□ -0.35
RAPGEF1-204ENST00000414781 PLLPQ9Y342 182 aa12.89□□□□□ -0.35
RAPGEF1-204ENST00000414781 OR6C74A6NCV1 312 aa12.88□□□□□ -0.35
RAPGEF1-204ENST00000414781 KIAA1324LA8MWY0 1029 aaPredicted RBP12.88□□□□□ -0.35
RAPGEF1-204ENST00000414781 TYROBPO43914 113 aa12.88□□□□□ -0.35
RAPGEF1-204ENST00000414781 KDM1AO60341 852 aa12.88□□□□□ -0.35
RAPGEF1-204ENST00000414781 ENO2P09104 434 aaPredicted RBP12.88□□□□□ -0.35
RAPGEF1-204ENST00000414781 HIST1H2AGP0C0S8 130 aaPredicted RBP12.88□□□□□ -0.35
RAPGEF1-204ENST00000414781 CD1DP15813 335 aa12.88□□□□□ -0.35
RAPGEF1-204ENST00000414781 IGFBP2P18065 325 aa12.88□□□□□ -0.35
RAPGEF1-204ENST00000414781 HIST1H2ADP20671 130 aa12.88□□□□□ -0.35
RAPGEF1-204ENST00000414781 TNFSF10P50591 281 aa12.88□□□□□ -0.35
RAPGEF1-204ENST00000414781 SP140Q13342 867 aa12.88□□□□□ -0.35
RAPGEF1-204ENST00000414781 DSG2Q14126 1118 aa12.88□□□□□ -0.35
RAPGEF1-204ENST00000414781 NFE2L1Q14494 772 aa12.88□□□□□ -0.35
RAPGEF1-204ENST00000414781 ZNF658BQ4V348 819 aaPredicted RBP12.88□□□□□ -0.35
RAPGEF1-204ENST00000414781 MRPL14Q6P1L8 145 aaKnown RBP12.88□□□□□ -0.35
RAPGEF1-204ENST00000414781 GIMAP7Q8NHV1 300 aa12.88□□□□□ -0.35
RAPGEF1-204ENST00000414781 RDH11Q8TC12 318 aa12.88□□□□□ -0.35
RAPGEF1-204ENST00000414781 MCOLN3Q8TDD5 553 aa12.88□□□□□ -0.35
RAPGEF1-204ENST00000414781 CA5BP1Q8WTZ4 195 aa12.88□□□□□ -0.35
RAPGEF1-204ENST00000414781 KCTD4Q8WVF5 259 aa12.88□□□□□ -0.35
RAPGEF1-204ENST00000414781 ANKRD49Q8WVL7 239 aa12.88□□□□□ -0.35
RAPGEF1-204ENST00000414781 SREK1Q8WXA9 508 aaKnown RBP12.88□□□□□ -0.35
RAPGEF1-204ENST00000414781 KIAA1191Q96A73 305 aa12.88□□□□□ -0.35
RAPGEF1-204ENST00000414781 NXNL1Q96CM4 212 aa12.88□□□□□ -0.35
RAPGEF1-204ENST00000414781 HIST1H2AHQ96KK5 128 aa12.88□□□□□ -0.35
RAPGEF1-204ENST00000414781 SLC30A3Q99726 388 aa12.88□□□□□ -0.35
RAPGEF1-204ENST00000414781 HIST1H2AJQ99878 128 aa12.88□□□□□ -0.35
RAPGEF1-204ENST00000414781 ZNF559Q9BR84 538 aa12.88□□□□□ -0.35
RAPGEF1-204ENST00000414781 H2AFJQ9BTM1 129 aa12.88□□□□□ -0.35
RAPGEF1-204ENST00000414781 MRPL46Q9H2W6 279 aaKnown RBP12.88□□□□□ -0.35
RAPGEF1-204ENST00000414781 SLC24A3Q9HC58 644 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms