RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 TEX19Q8NA77 164 aa4.72□□□□□ -1.65
VPS41-205ENST00000414632 MCUQ8NE86 351 aa4.72□□□□□ -1.65
VPS41-205ENST00000414632 SPATA4Q8NEY3 305 aa4.72□□□□□ -1.65
VPS41-205ENST00000414632 OR4E2Q8NGC2 313 aa4.72□□□□□ -1.65
VPS41-205ENST00000414632 OR5AR1Q8NGP9 310 aa4.72□□□□□ -1.65
VPS41-205ENST00000414632 CFAP61Q8NHU2 1237 aa4.72□□□□□ -1.65
VPS41-205ENST00000414632 WDR36Q8NI36 951 aaKnown RBP4.72□□□□□ -1.65
VPS41-205ENST00000414632 HEXDCQ8WVB3 486 aa4.72□□□□□ -1.65
VPS41-205ENST00000414632 SKA2Q8WVK7 121 aaPredicted RBP4.72□□□□□ -1.65
VPS41-205ENST00000414632 SH3KBP1Q96B97 665 aa4.72□□□□□ -1.65
VPS41-205ENST00000414632 SLC7A6OSQ96CW6 309 aaPredicted RBP4.72□□□□□ -1.65
VPS41-205ENST00000414632 TRIM44Q96DX7 344 aaPredicted RBP4.72□□□□□ -1.65
VPS41-205ENST00000414632 STAMBPL1Q96FJ0 436 aa4.72□□□□□ -1.65
VPS41-205ENST00000414632 SNF8Q96H20 258 aa4.72□□□□□ -1.65
VPS41-205ENST00000414632 PRR11Q96HE9 360 aaPredicted RBP4.72□□□□□ -1.65
VPS41-205ENST00000414632 ELMO2Q96JJ3 720 aa4.72□□□□□ -1.65
VPS41-205ENST00000414632 LINC00615Q96LM1 132 aaPredicted RBP4.72□□□□□ -1.65
VPS41-205ENST00000414632 PPM1MQ96MI6 270 aa4.72□□□□□ -1.65
VPS41-205ENST00000414632 C19orf43Q9BQ61 176 aa4.72□□□□□ -1.65
VPS41-205ENST00000414632 WDR83Q9BRX9 315 aaKnown RBP4.72□□□□□ -1.65
VPS41-205ENST00000414632 DPH1Q9BZG8 443 aa4.72□□□□□ -1.65
VPS41-205ENST00000414632 OR52A5Q9H2C5 316 aa4.72□□□□□ -1.65
VPS41-205ENST00000414632 EPB41L4BQ9H329 900 aa4.72□□□□□ -1.65
VPS41-205ENST00000414632 XKR8Q9H6D3 395 aa4.72□□□□□ -1.65
VPS41-205ENST00000414632 VPS37BQ9H9H4 285 aa4.72□□□□□ -1.65
VPS41-205ENST00000414632 SMURF2Q9HAU4 748 aa4.72□□□□□ -1.65
VPS41-205ENST00000414632 MRM3Q9HC36 420 aaKnown RBP4.72□□□□□ -1.65
VPS41-205ENST00000414632 APMAPQ9HDC9 416 aa4.72□□□□□ -1.65
VPS41-205ENST00000414632 SLC40A1Q9NP59 571 aa4.72□□□□□ -1.65
VPS41-205ENST00000414632 ASCL3Q9NQ33 180 aa4.72□□□□□ -1.65
VPS41-205ENST00000414632 PPANQ9NQ55 473 aaKnown RBP4.72□□□□□ -1.65
VPS41-205ENST00000414632 IARS2Q9NSE4 1012 aaKnown RBP4.72□□□□□ -1.65
VPS41-205ENST00000414632 C20orf96Q9NUD7 363 aaPredicted RBP4.72□□□□□ -1.65
VPS41-205ENST00000414632 POT1Q9NUX5 634 aa4.72□□□□□ -1.65
VPS41-205ENST00000414632 MOCS1Q9NZB8 636 aa4.72□□□□□ -1.65
VPS41-205ENST00000414632 FOXJ2Q9P0K8 574 aa4.72□□□□□ -1.65
VPS41-205ENST00000414632 GALPQ9UBC7 116 aa4.72□□□□□ -1.65
VPS41-205ENST00000414632 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.72□□□□□ -1.65
VPS41-205ENST00000414632 ACSL5Q9ULC5 683 aa4.72□□□□□ -1.65
VPS41-205ENST00000414632 ZDHHC8Q9ULC8 765 aa4.72□□□□□ -1.65
VPS41-205ENST00000414632 RIMKLBQ9ULI2 386 aa4.72□□□□□ -1.65
VPS41-205ENST00000414632 GPR52Q9Y2T5 361 aa4.72□□□□□ -1.65
VPS41-205ENST00000414632 MED16Q9Y2X0 877 aa4.72□□□□□ -1.65
VPS41-205ENST00000414632 IGSF10Q6WRI0 2623 aa4.72□□□□□ -1.65
VPS41-205ENST00000414632 ACACAQ13085 2346 aa4.72□□□□□ -1.65
VPS41-205ENST00000414632 ATMQ13315 3056 aa4.71□□□□□ -1.65
VPS41-205ENST00000414632 MGAQ8IWI9 3026 aa4.71□□□□□ -1.66
VPS41-205ENST00000414632 CHD6Q8TD26 2715 aa4.71□□□□□ -1.66
VPS41-205ENST00000414632 ZCWPW2A0A1B0GU75 182 aa4.71□□□□□ -1.66
VPS41-205ENST00000414632 FAM237BA0A1B0GVD1 139 aa4.71□□□□□ -1.66
VPS41-205ENST00000414632 SLC5A10A0PJK1 596 aa4.71□□□□□ -1.66
VPS41-205ENST00000414632 GSAPA4D1B5 854 aa4.71□□□□□ -1.66
VPS41-205ENST00000414632 OR6C74A6NCV1 312 aa4.71□□□□□ -1.66
VPS41-205ENST00000414632 TMEM8BA6NDV4 472 aa4.71□□□□□ -1.66
VPS41-205ENST00000414632 OR5K3A6NET4 321 aa4.71□□□□□ -1.66
VPS41-205ENST00000414632 LILRA5A6NI73 299 aa4.71□□□□□ -1.66
VPS41-205ENST00000414632 AP3B1O00203 1094 aa4.71□□□□□ -1.66
VPS41-205ENST00000414632 BTN3A3O00478 584 aa4.71□□□□□ -1.66
VPS41-205ENST00000414632 PRMT5O14744 637 aaPredicted RBP4.71□□□□□ -1.66
VPS41-205ENST00000414632 LIN7AO14910 233 aaPredicted RBP4.71□□□□□ -1.66
VPS41-205ENST00000414632 TP73O15350 636 aa4.71□□□□□ -1.66
VPS41-205ENST00000414632 ZW10O43264 779 aa4.71□□□□□ -1.66
VPS41-205ENST00000414632 KCNJ13O60928 360 aa4.71□□□□□ -1.66
VPS41-205ENST00000414632 SKAP2O75563 359 aaPredicted RBP4.71□□□□□ -1.66
VPS41-205ENST00000414632 PIAS1O75925 651 aa4.71□□□□□ -1.66
VPS41-205ENST00000414632 USP1O94782 785 aa4.71□□□□□ -1.66
VPS41-205ENST00000414632 AP2A2O94973 939 aa4.71□□□□□ -1.66
VPS41-205ENST00000414632 SEC31AO94979 1220 aaKnown RBP4.71□□□□□ -1.66
VPS41-205ENST00000414632 FTH1P02794 183 aa4.71□□□□□ -1.66
VPS41-205ENST00000414632 MT-ND5P03915 603 aa4.71□□□□□ -1.66
VPS41-205ENST00000414632 JUNP05412 331 aaKnown RBP4.71□□□□□ -1.66
VPS41-205ENST00000414632 VSIG10L2P0DP72 767 aa4.71□□□□□ -1.66
VPS41-205ENST00000414632 FGF3P11487 239 aaPredicted RBP4.71□□□□□ -1.66
VPS41-205ENST00000414632 MLNP12872 115 aa4.71□□□□□ -1.66
VPS41-205ENST00000414632 PGAM1P18669 254 aa4.71□□□□□ -1.66
VPS41-205ENST00000414632 CHRM3P20309 590 aa4.71□□□□□ -1.66
VPS41-205ENST00000414632 SLC5A2P31639 672 aa4.71□□□□□ -1.66
VPS41-205ENST00000414632 CSTF2P33240 577 aaKnown RBP eCLIP4.71□□□□□ -1.66
VPS41-205ENST00000414632 BDKRB1P46663 353 aa4.71□□□□□ -1.66
VPS41-205ENST00000414632 CARSP49589 748 aaKnown RBP4.71□□□□□ -1.66
VPS41-205ENST00000414632 FOXM1Q08050 763 aa4.71□□□□□ -1.66
VPS41-205ENST00000414632 PDIA2Q13087 525 aaKnown RBP4.71□□□□□ -1.66
VPS41-205ENST00000414632 SRSF6Q13247 344 aaKnown RBP4.71□□□□□ -1.66
VPS41-205ENST00000414632 CUL1Q13616 776 aa4.71□□□□□ -1.66
VPS41-205ENST00000414632 KCNAB1Q14722 419 aa4.71□□□□□ -1.66
VPS41-205ENST00000414632 CRYMQ14894 314 aa4.71□□□□□ -1.66
VPS41-205ENST00000414632 MORF4L2Q15014 288 aa4.71□□□□□ -1.66
VPS41-205ENST00000414632 TGIF1Q15583 401 aa4.71□□□□□ -1.66
VPS41-205ENST00000414632 PFKFB4Q16877 469 aa4.71□□□□□ -1.66
VPS41-205ENST00000414632 TYSND1Q2T9J0 566 aa4.71□□□□□ -1.66
VPS41-205ENST00000414632 TBC1D25Q3MII6 688 aa4.71□□□□□ -1.66
VPS41-205ENST00000414632 CCSMST1Q4G0I0 132 aa4.71□□□□□ -1.66
VPS41-205ENST00000414632 DNAJC21Q5F1R6 531 aaKnown RBP4.71□□□□□ -1.66
VPS41-205ENST00000414632 AARS2Q5JTZ9 985 aaKnown RBP4.71□□□□□ -1.66
VPS41-205ENST00000414632 LCE3BQ5TA77 95 aa4.71□□□□□ -1.66
VPS41-205ENST00000414632 CACHD1Q5VU97 1274 aa4.71□□□□□ -1.66
VPS41-205ENST00000414632 LYPLAL1Q5VWZ2 237 aa4.71□□□□□ -1.66
VPS41-205ENST00000414632 ANKS6Q68DC2 871 aa4.71□□□□□ -1.66
VPS41-205ENST00000414632 MRNIPQ6NTE8 343 aa4.71□□□□□ -1.66
VPS41-205ENST00000414632 NEPROQ6NW34 567 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms