RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 ERFP50548 548 aa3.49□□□□□ -1.85
SF3B1-203ENST00000414174 RAB9AP51151 201 aa3.49□□□□□ -1.85
SF3B1-203ENST00000414174 HNRNPMP52272 730 aaKnown RBP eCLIP3.49□□□□□ -1.853e-7■■■■□ 24.6
SF3B1-203ENST00000414174 NKX2-5P52952 324 aaPredicted RBP3.49□□□□□ -1.85
SF3B1-203ENST00000414174 PPP2CBP62714 309 aa3.49□□□□□ -1.85
SF3B1-203ENST00000414174 PPP2CAP67775 309 aa3.49□□□□□ -1.85
SF3B1-203ENST00000414174 FLI1Q01543 452 aaPredicted RBP3.49□□□□□ -1.85
SF3B1-203ENST00000414174 NHLH1Q02575 133 aa3.49□□□□□ -1.85
SF3B1-203ENST00000414174 SLC3A1Q07837 685 aa3.49□□□□□ -1.85
SF3B1-203ENST00000414174 TMEM115Q12893 351 aaPredicted RBP3.49□□□□□ -1.85
SF3B1-203ENST00000414174 MTAPQ13126 283 aa3.49□□□□□ -1.85
SF3B1-203ENST00000414174 SLAMF1Q13291 335 aa3.49□□□□□ -1.85
SF3B1-203ENST00000414174 MADCAM1Q13477 382 aa3.49□□□□□ -1.85
SF3B1-203ENST00000414174 EIF4EBP2Q13542 120 aaPredicted RBP3.49□□□□□ -1.85
SF3B1-203ENST00000414174 NAE1Q13564 534 aa3.49□□□□□ -1.85
SF3B1-203ENST00000414174 GRAPQ13588 217 aa3.49□□□□□ -1.85
SF3B1-203ENST00000414174 SLC17A1Q14916 467 aa3.49□□□□□ -1.85
SF3B1-203ENST00000414174 PSG3Q16557 428 aa3.49□□□□□ -1.85
SF3B1-203ENST00000414174 UGT8Q16880 541 aa3.49□□□□□ -1.85
SF3B1-203ENST00000414174 NDUFAF6Q330K2 333 aa3.49□□□□□ -1.85
SF3B1-203ENST00000414174 TRIM60Q495X7 471 aa3.49□□□□□ -1.85
SF3B1-203ENST00000414174 C6orf136Q5SQH8 315 aa3.49□□□□□ -1.85
SF3B1-203ENST00000414174 MROH9Q5TGP6 573 aa3.49□□□□□ -1.85
SF3B1-203ENST00000414174 GPR157Q5UAW9 335 aa3.49□□□□□ -1.85
SF3B1-203ENST00000414174 RNLSQ5VYX0 342 aa3.49□□□□□ -1.85
SF3B1-203ENST00000414174 FAM91A1Q658Y4 838 aa3.49□□□□□ -1.85
SF3B1-203ENST00000414174 RAP1GAP2Q684P5 730 aa3.49□□□□□ -1.85
SF3B1-203ENST00000414174 NCR3LG1Q68D85 454 aa3.49□□□□□ -1.85
SF3B1-203ENST00000414174 NADSYN1Q6IA69 706 aa3.49□□□□□ -1.85
SF3B1-203ENST00000414174 ELP2Q6IA86 826 aa3.49□□□□□ -1.85
SF3B1-203ENST00000414174 ANKRD26P1Q6NSI1 321 aa3.49□□□□□ -1.85
SF3B1-203ENST00000414174 MAMDC4Q6UXC1 1216 aa3.49□□□□□ -1.85
SF3B1-203ENST00000414174 RSPO2Q6UXX9 243 aaPredicted RBP3.49□□□□□ -1.85
SF3B1-203ENST00000414174 PGAP1Q75T13 922 aa3.49□□□□□ -1.85
SF3B1-203ENST00000414174 GAREM2Q75VX8 874 aa3.49□□□□□ -1.85
SF3B1-203ENST00000414174 PID1Q7Z2X4 250 aa3.49□□□□□ -1.85
SF3B1-203ENST00000414174 LUZP2Q86TE4 346 aa3.49□□□□□ -1.85
SF3B1-203ENST00000414174 GPR180Q86V85 440 aa3.49□□□□□ -1.85
SF3B1-203ENST00000414174 PAQR7Q86WK9 346 aa3.49□□□□□ -1.85
SF3B1-203ENST00000414174 SFR1Q86XK3 245 aa3.49□□□□□ -1.85
SF3B1-203ENST00000414174 PLD3Q8IV08 490 aa3.49□□□□□ -1.85
SF3B1-203ENST00000414174 SIAH3Q8IW03 269 aa3.49□□□□□ -1.85
SF3B1-203ENST00000414174 CENPLQ8N0S6 344 aaPredicted RBP3.49□□□□□ -1.85
SF3B1-203ENST00000414174 MMP21Q8N119 569 aa3.49□□□□□ -1.85
SF3B1-203ENST00000414174 CYP4Z2PQ8N1L4 340 aa3.49□□□□□ -1.85
SF3B1-203ENST00000414174 UXS1Q8NBZ7 420 aa3.49□□□□□ -1.85
SF3B1-203ENST00000414174 TMEM35BQ8NCS4 154 aa3.49□□□□□ -1.85
SF3B1-203ENST00000414174 OR4D10Q8NGI6 311 aa3.49□□□□□ -1.85
SF3B1-203ENST00000414174 OR52B4Q8NGK2 314 aa3.49□□□□□ -1.85
SF3B1-203ENST00000414174 ADAMTS17Q8TE56 1095 aa3.49□□□□□ -1.85
SF3B1-203ENST00000414174 GRHL3Q8TE85 626 aa3.49□□□□□ -1.85
SF3B1-203ENST00000414174 ARNTL2Q8WYA1 636 aa3.49□□□□□ -1.85
SF3B1-203ENST00000414174 FIG4Q92562 907 aa3.49□□□□□ -1.85
SF3B1-203ENST00000414174 KAT5Q92993 513 aa3.49□□□□□ -1.85
SF3B1-203ENST00000414174 YIPF5Q969M3 257 aa3.49□□□□□ -1.85
SF3B1-203ENST00000414174 PSMG2Q969U7 264 aa3.49□□□□□ -1.85
SF3B1-203ENST00000414174 MARC2Q969Z3 335 aa3.49□□□□□ -1.85
SF3B1-203ENST00000414174 MIB2Q96AX9 1013 aa3.49□□□□□ -1.85
SF3B1-203ENST00000414174 EAF2Q96CJ1 260 aaPredicted RBP3.49□□□□□ -1.85
SF3B1-203ENST00000414174 MCRS1Q96EZ8 462 aa3.49□□□□□ -1.85
SF3B1-203ENST00000414174 TMEM176AQ96HP8 235 aa3.49□□□□□ -1.85
SF3B1-203ENST00000414174 CLIC6Q96NY7 704 aa3.49□□□□□ -1.85
SF3B1-203ENST00000414174 SLITRK1Q96PX8 696 aa3.49□□□□□ -1.85
SF3B1-203ENST00000414174 BTBD9Q96Q07 612 aa3.49□□□□□ -1.85
SF3B1-203ENST00000414174 PRRT1Q99946 306 aa3.49□□□□□ -1.85
SF3B1-203ENST00000414174 TMEM47Q9BQJ4 181 aa3.49□□□□□ -1.85
SF3B1-203ENST00000414174 C17orf80Q9BSJ5 609 aa3.49□□□□□ -1.85
SF3B1-203ENST00000414174 BOCQ9BWV1 1114 aa3.49□□□□□ -1.85
SF3B1-203ENST00000414174 C1QTNF7Q9BXJ2 289 aa3.49□□□□□ -1.85
SF3B1-203ENST00000414174 DPH1Q9BZG8 443 aa3.49□□□□□ -1.85
SF3B1-203ENST00000414174 OR2B2Q9GZK3 357 aa3.49□□□□□ -1.85
SF3B1-203ENST00000414174 CLPBQ9H078 707 aa3.49□□□□□ -1.85
SF3B1-203ENST00000414174 MED20Q9H944 212 aa3.49□□□□□ -1.85
SF3B1-203ENST00000414174 LRRC4Q9HBW1 653 aa3.49□□□□□ -1.85
SF3B1-203ENST00000414174 XPNPEP1Q9NQW7 623 aa3.49□□□□□ -1.85
SF3B1-203ENST00000414174 RNF146Q9NTX7 359 aa3.49□□□□□ -1.85
SF3B1-203ENST00000414174 TXLNGQ9NUQ3 528 aa3.49□□□□□ -1.85
SF3B1-203ENST00000414174 TMEM248Q9NWD8 314 aa3.49□□□□□ -1.85
SF3B1-203ENST00000414174 BEX4Q9NWD9 120 aaPredicted RBP3.49□□□□□ -1.85
SF3B1-203ENST00000414174 MRPL22Q9NWU5 206 aaKnown RBP3.49□□□□□ -1.85
SF3B1-203ENST00000414174 GCNT4Q9P109 453 aa3.49□□□□□ -1.85
SF3B1-203ENST00000414174 NTMQ9P121 344 aa3.49□□□□□ -1.85
SF3B1-203ENST00000414174 CTTNBP2NLQ9P2B4 639 aa3.49□□□□□ -1.85
SF3B1-203ENST00000414174 STOX2Q9P2F5 926 aaPredicted RBP3.49□□□□□ -1.85
SF3B1-203ENST00000414174 SIX4Q9UIU6 781 aa3.49□□□□□ -1.85
SF3B1-203ENST00000414174 MID2Q9UJV3 735 aa3.49□□□□□ -1.85
SF3B1-203ENST00000414174 MKLN1Q9UL63 735 aa3.49□□□□□ -1.85
SF3B1-203ENST00000414174 KCNK6Q9Y257 313 aa3.49□□□□□ -1.85
SF3B1-203ENST00000414174 STARD10Q9Y365 291 aa3.49□□□□□ -1.85
SF3B1-203ENST00000414174 RBMX2Q9Y388 322 aaKnown RBP3.49□□□□□ -1.85
SF3B1-203ENST00000414174 ADAM18Q9Y3Q7 739 aa3.49□□□□□ -1.85
SF3B1-203ENST00000414174 PCDHA2Q9Y5H9 948 aa3.49□□□□□ -1.85
SF3B1-203ENST00000414174 NUBP2Q9Y5Y2 271 aa3.49□□□□□ -1.85
SF3B1-203ENST00000414174 FKBP7Q9Y680 259 aa3.49□□□□□ -1.85
SF3B1-203ENST00000414174 SLC22A7Q9Y694 548 aa3.49□□□□□ -1.85
SF3B1-203ENST00000414174 ZHX2Q9Y6X8 837 aa3.49□□□□□ -1.85
SF3B1-203ENST00000414174 ADGRL3Q9HAR2 1447 aa3.49□□□□□ -1.85
SF3B1-203ENST00000414174 CCDC144AA2RUR9 1427 aa3.48□□□□□ -1.85
SF3B1-203ENST00000414174 NUP160Q12769 1436 aa3.48□□□□□ -1.85
SF3B1-203ENST00000414174 ARHGAP31Q2M1Z3 1444 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms