RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 CCRL2O00421 344 aa16.98■□□□□ 0.31
SDCBP-202ENST00000413219 MPZL2O60487 215 aa16.98■□□□□ 0.31
SDCBP-202ENST00000413219 GCM2O75603 506 aaPredicted RBP16.98■□□□□ 0.31
SDCBP-202ENST00000413219 DNTTP04053 509 aa16.98■□□□□ 0.31
SDCBP-202ENST00000413219 ITGA2P17301 1181 aa16.98■□□□□ 0.31
SDCBP-202ENST00000413219 POLR2EP19388 210 aaKnown RBP16.98■□□□□ 0.31
SDCBP-202ENST00000413219 AP1S2P56377 157 aa16.98■□□□□ 0.31
SDCBP-202ENST00000413219 CHIT1Q13231 466 aa16.98■□□□□ 0.31
SDCBP-202ENST00000413219 LRRC26Q2I0M4 334 aa16.98■□□□□ 0.31
SDCBP-202ENST00000413219 TMC5Q6UXY8 1006 aa16.98■□□□□ 0.31
SDCBP-202ENST00000413219 ATCAYQ86WG3 371 aa16.98■□□□□ 0.31
SDCBP-202ENST00000413219 RNF130Q86XS8 419 aa16.98■□□□□ 0.31
SDCBP-202ENST00000413219 KRT73Q86Y46 540 aa16.98■□□□□ 0.31
SDCBP-202ENST00000413219 B3GNT7Q8NFL0 401 aa16.98■□□□□ 0.31
SDCBP-202ENST00000413219 C11orf24Q96F05 449 aaPredicted RBP16.98■□□□□ 0.31
SDCBP-202ENST00000413219 TRNT1Q96Q11 434 aaKnown RBP16.98■□□□□ 0.31
SDCBP-202ENST00000413219 COPS8Q99627 209 aa16.98■□□□□ 0.31
SDCBP-202ENST00000413219 MGLLQ99685 303 aa16.98■□□□□ 0.31
SDCBP-202ENST00000413219 ITM2CQ9NQX7 267 aa16.98■□□□□ 0.31
SDCBP-202ENST00000413219 MS4A12Q9NXJ0 267 aa16.98■□□□□ 0.31
SDCBP-202ENST00000413219 TBC1D24Q9ULP9 559 aa16.98■□□□□ 0.31
SDCBP-202ENST00000413219 SLC22A14Q9Y267 594 aa16.98■□□□□ 0.31
SDCBP-202ENST00000413219 BTBD3Q9Y2F9 522 aa16.98■□□□□ 0.31
SDCBP-202ENST00000413219 TBKBP1A7MCY6 615 aa16.98■□□□□ 0.31
SDCBP-202ENST00000413219 ASGR1P07306 291 aa16.98■□□□□ 0.31
SDCBP-202ENST00000413219 OR56A5P0C7T3 313 aa16.98■□□□□ 0.31
SDCBP-202ENST00000413219 HSD3B1P14060 373 aa16.98■□□□□ 0.31
SDCBP-202ENST00000413219 CYP2A7P20853 494 aa16.98■□□□□ 0.31
SDCBP-202ENST00000413219 HSD3B2P26439 372 aa16.98■□□□□ 0.31
SDCBP-202ENST00000413219 DDOSTP39656 456 aa16.98■□□□□ 0.31
SDCBP-202ENST00000413219 ACSM2AQ08AH3 577 aa16.98■□□□□ 0.31
SDCBP-202ENST00000413219 GPR50Q13585 617 aa16.98■□□□□ 0.31
SDCBP-202ENST00000413219 CPTPQ5TA50 214 aa16.98■□□□□ 0.31
SDCBP-202ENST00000413219 ACSM2BQ68CK6 577 aa16.98■□□□□ 0.31
SDCBP-202ENST00000413219 NPAS3Q8IXF0 933 aa16.98■□□□□ 0.31
SDCBP-202ENST00000413219 UTP15Q8TED0 518 aaKnown RBP16.98■□□□□ 0.31
SDCBP-202ENST00000413219 ALG14Q96F25 216 aa16.98■□□□□ 0.31
SDCBP-202ENST00000413219 OR2A14Q96R47 310 aa16.98■□□□□ 0.31
SDCBP-202ENST00000413219 LYSMD1Q96S90 227 aa16.98■□□□□ 0.31
SDCBP-202ENST00000413219 MAPKAP1Q9BPZ7 522 aa16.98■□□□□ 0.31
SDCBP-202ENST00000413219 KLF16Q9BXK1 252 aaPredicted RBP16.98■□□□□ 0.31
SDCBP-202ENST00000413219 TM6SF2Q9BZW4 377 aa16.98■□□□□ 0.31
SDCBP-202ENST00000413219 ZNF556Q9HAH1 456 aa16.98■□□□□ 0.31
SDCBP-202ENST00000413219 ZNF282Q9UDV7 671 aaPredicted RBP16.98■□□□□ 0.31
SDCBP-202ENST00000413219 VPS4AQ9UN37 437 aa16.98■□□□□ 0.31
SDCBP-202ENST00000413219 CFAP20Q9Y6A4 193 aaKnown RBP16.98■□□□□ 0.31
SDCBP-202ENST00000413219 IGLV3-16A0A075B6K0 115 aa16.97■□□□□ 0.31
SDCBP-202ENST00000413219 GFYI3L273 518 aa16.97■□□□□ 0.31
SDCBP-202ENST00000413219 SCO2O43819 266 aa16.97■□□□□ 0.31
SDCBP-202ENST00000413219 TBL1XO60907 577 aa16.97■□□□□ 0.31
SDCBP-202ENST00000413219 ADAMTS4O75173 837 aa16.97■□□□□ 0.31
SDCBP-202ENST00000413219 HSMCR30P0CW71 290 aa16.97■□□□□ 0.31
SDCBP-202ENST00000413219 TRAPPC2P0DI81 140 aa16.97■□□□□ 0.31
SDCBP-202ENST00000413219 TRAPPC2BP0DI82 140 aa16.97■□□□□ 0.31
SDCBP-202ENST00000413219 CDC42P60953 191 aa16.97■□□□□ 0.31
SDCBP-202ENST00000413219 SPIBQ01892 262 aa16.97■□□□□ 0.31
SDCBP-202ENST00000413219 ELAVL2Q12926 359 aaKnown RBP16.97■□□□□ 0.31
SDCBP-202ENST00000413219 TSTQ16762 297 aaKnown RBP16.97■□□□□ 0.31
SDCBP-202ENST00000413219 ANKS3Q6ZW76 656 aa16.97■□□□□ 0.31
SDCBP-202ENST00000413219 WDR20Q8TBZ3 569 aa16.97■□□□□ 0.31
SDCBP-202ENST00000413219 NIPSNAP1Q9BPW8 284 aa16.97■□□□□ 0.31
SDCBP-202ENST00000413219 TAPBPLQ9BX59 468 aa16.97■□□□□ 0.31
SDCBP-202ENST00000413219 NDEL1Q9GZM8 345 aa16.97■□□□□ 0.31
SDCBP-202ENST00000413219 SMURF1Q9HCE7 757 aa16.97■□□□□ 0.31
SDCBP-202ENST00000413219 RLIMQ9NVW2 624 aa16.97■□□□□ 0.31
SDCBP-202ENST00000413219 MARCH5Q9NX47 278 aa16.97■□□□□ 0.31
SDCBP-202ENST00000413219 CTDSP2O14595 271 aa16.97■□□□□ 0.31
SDCBP-202ENST00000413219 LATS1O95835 1130 aa16.97■□□□□ 0.31
SDCBP-202ENST00000413219 IRF1P10914 325 aa16.97■□□□□ 0.31
SDCBP-202ENST00000413219 PIPP12273 146 aaPredicted RBP16.97■□□□□ 0.31
SDCBP-202ENST00000413219 TNFSF8P32971 234 aa16.97■□□□□ 0.31
SDCBP-202ENST00000413219 CRISP3P54108 245 aa16.97■□□□□ 0.31
SDCBP-202ENST00000413219 B4GALNT1Q00973 533 aa16.97■□□□□ 0.31
SDCBP-202ENST00000413219 IRF8Q02556 426 aa16.97■□□□□ 0.31
SDCBP-202ENST00000413219 RBBP4Q09028 425 aa16.97■□□□□ 0.31
SDCBP-202ENST00000413219 KCNC3Q14003 757 aa16.97■□□□□ 0.31
SDCBP-202ENST00000413219 EXOC3L2Q2M3D2 409 aa16.97■□□□□ 0.31
SDCBP-202ENST00000413219 BCL7AQ4VC05 210 aa16.97■□□□□ 0.31
SDCBP-202ENST00000413219 RTP2Q5QGT7 225 aa16.97■□□□□ 0.31
SDCBP-202ENST00000413219 FUT10Q6P4F1 479 aa16.97■□□□□ 0.31
SDCBP-202ENST00000413219 GDPGP1Q6ZNW5 385 aa16.97■□□□□ 0.31
SDCBP-202ENST00000413219 HJURPQ8NCD3 748 aaPredicted RBP16.97■□□□□ 0.31
SDCBP-202ENST00000413219 GPR26Q8NDV2 337 aa16.97■□□□□ 0.31
SDCBP-202ENST00000413219 WBP2Q969T9 261 aa16.97■□□□□ 0.31
SDCBP-202ENST00000413219 COQ8BQ96D53 544 aa16.97■□□□□ 0.31
SDCBP-202ENST00000413219 RACGAP1Q9H0H5 632 aa16.97■□□□□ 0.31
SDCBP-202ENST00000413219 TRPV5Q9NQA5 729 aa16.97■□□□□ 0.31
SDCBP-202ENST00000413219 ASAH2Q9NR71 780 aa16.97■□□□□ 0.31
SDCBP-202ENST00000413219 GABRR3A8MPY1 467 aa16.96■□□□□ 0.31
SDCBP-202ENST00000413219 HOXC11O43248 304 aaPredicted RBP16.96■□□□□ 0.31
SDCBP-202ENST00000413219 HLA-EP13747 358 aa16.96■□□□□ 0.31
SDCBP-202ENST00000413219 AQP1P29972 269 aa16.96■□□□□ 0.31
SDCBP-202ENST00000413219 CSKP41240 450 aa16.96■□□□□ 0.31
SDCBP-202ENST00000413219 CDH12P55289 794 aa16.96■□□□□ 0.31
SDCBP-202ENST00000413219 PCDH1Q08174 1060 aa16.96■□□□□ 0.31
SDCBP-202ENST00000413219 TAF1CQ15572 869 aaPredicted RBP16.96■□□□□ 0.31
SDCBP-202ENST00000413219 PLEKHS1Q5SXH7 462 aa16.96■□□□□ 0.31
SDCBP-202ENST00000413219 RETSATQ6NUM9 610 aa16.96■□□□□ 0.31
SDCBP-202ENST00000413219 C17orf99Q6UX52 265 aa16.96■□□□□ 0.31
SDCBP-202ENST00000413219 SLC44A2Q8IWA5 706 aaPredicted RBP16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms