RNA–Protein interactions for RNA: ENST00000412393.5

LINC00342-201, long intergenic non-protein coding RNA 342, humanhuman

TSL 3 BASIC

Gene LINC00342, Length 654 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-201ENST00000412393 PCDHGA7Q9Y5G6 932 aa5.14□□□□□ -1.59
LINC00342-201ENST00000412393 SPO11Q9Y5K1 396 aa5.14□□□□□ -1.59
LINC00342-201ENST00000412393 PCYT1BQ9Y5K3 369 aaPredicted RBP5.14□□□□□ -1.59
LINC00342-201ENST00000412393 CELSR3Q9NYQ7 3312 aa5.14□□□□□ -1.59
LINC00342-201ENST00000412393 BPTFQ12830 3046 aa5.14□□□□□ -1.59
LINC00342-201ENST00000412393 NBEAQ8NFP9 2946 aa5.13□□□□□ -1.59
LINC00342-201ENST00000412393 COL6A6A6NMZ7 2263 aa5.13□□□□□ -1.59
LINC00342-201ENST00000412393 IGHV1OR21-1A0A087WYE8 117 aa5.13□□□□□ -1.59
LINC00342-201ENST00000412393 A0A088AWK7 358 aa5.13□□□□□ -1.59
LINC00342-201ENST00000412393 IGHV5-10-1A0A0J9YXX1 117 aa5.13□□□□□ -1.59
LINC00342-201ENST00000412393 A0A1B0GVG6 124 aa5.13□□□□□ -1.59
LINC00342-201ENST00000412393 LOC285095A0A1B0GVY8 99 aa5.13□□□□□ -1.59
LINC00342-201ENST00000412393 SDR42E2A6NKP2 422 aa5.13□□□□□ -1.59
LINC00342-201ENST00000412393 HACD1B0YJ81 288 aa5.13□□□□□ -1.59
LINC00342-201ENST00000412393 B2RBV5 119 aa5.13□□□□□ -1.59
LINC00342-201ENST00000412393 F5H423 210 aaPredicted RBP5.13□□□□□ -1.59
LINC00342-201ENST00000412393 H3BNX3 289 aa5.13□□□□□ -1.59
LINC00342-201ENST00000412393 H7C0C1 242 aa5.13□□□□□ -1.59
LINC00342-201ENST00000412393 APOC4-APOC2K7ER74 178 aa5.13□□□□□ -1.59
LINC00342-201ENST00000412393 FCHO1O14526 889 aa5.13□□□□□ -1.59
LINC00342-201ENST00000412393 SLC22A2O15244 555 aa5.13□□□□□ -1.59
LINC00342-201ENST00000412393 GRID2O43424 1007 aa5.13□□□□□ -1.59
LINC00342-201ENST00000412393 SNX2O60749 519 aa5.13□□□□□ -1.59
LINC00342-201ENST00000412393 SNNO75324 88 aaPredicted RBP5.13□□□□□ -1.59
LINC00342-201ENST00000412393 CIB2O75838 187 aa5.13□□□□□ -1.59
LINC00342-201ENST00000412393 EML2O95834 649 aa5.13□□□□□ -1.59
LINC00342-201ENST00000412393 IL18BPO95998 194 aa5.13□□□□□ -1.59
LINC00342-201ENST00000412393 EPOP01588 193 aa5.13□□□□□ -1.59
LINC00342-201ENST00000412393 APOC2P02655 101 aa5.13□□□□□ -1.59
LINC00342-201ENST00000412393 C1QAP02745 245 aa5.13□□□□□ -1.59
LINC00342-201ENST00000412393 ACP5P13686 325 aa5.13□□□□□ -1.59
LINC00342-201ENST00000412393 SLC2A4P14672 509 aa5.13□□□□□ -1.59
LINC00342-201ENST00000412393 ALOX15P16050 662 aaPredicted RBP5.13□□□□□ -1.59
LINC00342-201ENST00000412393 ZNF8P17098 575 aaPredicted RBP5.13□□□□□ -1.59
LINC00342-201ENST00000412393 BPIP17213 487 aa5.13□□□□□ -1.59
LINC00342-201ENST00000412393 ITIH1P19827 911 aa5.13□□□□□ -1.59
LINC00342-201ENST00000412393 ADSLP30566 484 aaPredicted RBP5.13□□□□□ -1.59
LINC00342-201ENST00000412393 STIP1P31948 543 aaKnown RBP5.13□□□□□ -1.59
LINC00342-201ENST00000412393 MSX2P35548 267 aaPredicted RBP5.13□□□□□ -1.59
LINC00342-201ENST00000412393 ETV5P41161 510 aa5.13□□□□□ -1.59
LINC00342-201ENST00000412393 MAGEA6P43360 314 aa5.13□□□□□ -1.59
LINC00342-201ENST00000412393 FASLGP48023 281 aa5.13□□□□□ -1.59
LINC00342-201ENST00000412393 ATP5OP48047 213 aa5.13□□□□□ -1.59
LINC00342-201ENST00000412393 HSPA13P48723 471 aa5.13□□□□□ -1.59
LINC00342-201ENST00000412393 CHN2P52757 468 aa5.13□□□□□ -1.59
LINC00342-201ENST00000412393 MAPK10P53779 464 aa5.13□□□□□ -1.59
LINC00342-201ENST00000412393 GFRA1P56159 465 aa5.13□□□□□ -1.59
LINC00342-201ENST00000412393 WNT3AP56704 352 aa5.13□□□□□ -1.59
LINC00342-201ENST00000412393 SESN3P58005 492 aa5.13□□□□□ -1.59
LINC00342-201ENST00000412393 GPX6P59796 221 aa5.13□□□□□ -1.59
LINC00342-201ENST00000412393 KRTAP10-11P60412 298 aa5.13□□□□□ -1.59
LINC00342-201ENST00000412393 HPCAP84074 193 aa5.13□□□□□ -1.59
LINC00342-201ENST00000412393 TBL3Q12788 808 aaKnown RBP5.13□□□□□ -1.59
LINC00342-201ENST00000412393 CDC16Q13042 620 aa5.13□□□□□ -1.59
LINC00342-201ENST00000412393 SQSTM1Q13501 440 aa5.13□□□□□ -1.59
LINC00342-201ENST00000412393 THOC5Q13769 683 aaKnown RBP5.13□□□□□ -1.59
LINC00342-201ENST00000412393 C16orf72Q14CZ0 275 aa5.13□□□□□ -1.59
LINC00342-201ENST00000412393 NOMO1Q15155 1222 aa5.13□□□□□ -1.59
LINC00342-201ENST00000412393 SIRPB2Q5JXA9 342 aa5.13□□□□□ -1.59
LINC00342-201ENST00000412393 OGFRL1Q5TC84 451 aaPredicted RBP5.13□□□□□ -1.59
LINC00342-201ENST00000412393 ARHGAP40Q5TG30 622 aa5.13□□□□□ -1.59
LINC00342-201ENST00000412393 IRAK1BP1Q5VVH5 260 aa5.13□□□□□ -1.59
LINC00342-201ENST00000412393 NKAIN2Q5VXU1 208 aa5.13□□□□□ -1.59
LINC00342-201ENST00000412393 ATG16L1Q676U5 607 aa5.13□□□□□ -1.59
LINC00342-201ENST00000412393 KDELC1Q6UW63 502 aa5.13□□□□□ -1.59
LINC00342-201ENST00000412393 Q6ZNX1 250 aa5.13□□□□□ -1.59
LINC00342-201ENST00000412393 CXXC5Q7LFL8 322 aaKnown RBP5.13□□□□□ -1.59
LINC00342-201ENST00000412393 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.13□□□□□ -1.59
LINC00342-201ENST00000412393 DHDDSQ86SQ9 333 aa5.13□□□□□ -1.59
LINC00342-201ENST00000412393 SPATA24Q86W54 205 aa5.13□□□□□ -1.59
LINC00342-201ENST00000412393 PRIMA1Q86XR5 153 aa5.13□□□□□ -1.59
LINC00342-201ENST00000412393 PHYKPLQ8IUZ5 450 aa5.13□□□□□ -1.59
LINC00342-201ENST00000412393 ERI1Q8IV48 349 aaKnown RBP5.13□□□□□ -1.59
LINC00342-201ENST00000412393 SFRP1Q8N474 314 aa5.13□□□□□ -1.59
LINC00342-201ENST00000412393 TTC30BQ8N4P2 665 aa5.13□□□□□ -1.59
LINC00342-201ENST00000412393 SLC25A41Q8N5S1 370 aa5.13□□□□□ -1.59
LINC00342-201ENST00000412393 NAT8LQ8N9F0 302 aa5.13□□□□□ -1.59
LINC00342-201ENST00000412393 ZBTB8BQ8NAP8 495 aaPredicted RBP5.13□□□□□ -1.59
LINC00342-201ENST00000412393 CATSPER1Q8NEC5 780 aa5.13□□□□□ -1.59
LINC00342-201ENST00000412393 IPMKQ8NFU5 416 aa5.13□□□□□ -1.59
LINC00342-201ENST00000412393 OR6Y1Q8NGX8 325 aa5.13□□□□□ -1.59
LINC00342-201ENST00000412393 OR10G6Q8NH81 332 aa5.13□□□□□ -1.59
LINC00342-201ENST00000412393 ACTRT2Q8TDY3 377 aa5.13□□□□□ -1.59
LINC00342-201ENST00000412393 DCAKDQ8WVC6 231 aa5.13□□□□□ -1.59
LINC00342-201ENST00000412393 C1orf54Q8WWF1 131 aa5.13□□□□□ -1.59
LINC00342-201ENST00000412393 SLC44A1Q8WWI5 657 aa5.13□□□□□ -1.59
LINC00342-201ENST00000412393 HTR3CQ8WXA8 447 aa5.13□□□□□ -1.59
LINC00342-201ENST00000412393 USP7Q93009 1102 aa5.13□□□□□ -1.59
LINC00342-201ENST00000412393 GLYATL1Q969I3 302 aa5.13□□□□□ -1.59
LINC00342-201ENST00000412393 SH3KBP1Q96B97 665 aa5.13□□□□□ -1.59
LINC00342-201ENST00000412393 MTBPQ96DY7 904 aa5.13□□□□□ -1.59
LINC00342-201ENST00000412393 SGF29Q96ES7 293 aa5.13□□□□□ -1.59
LINC00342-201ENST00000412393 AHCYL2Q96HN2 611 aaKnown RBP5.13□□□□□ -1.59
LINC00342-201ENST00000412393 QKIQ96PU8 341 aaKnown RBP eCLIP5.13□□□□□ -1.59
LINC00342-201ENST00000412393 PANX3Q96QZ0 392 aa5.13□□□□□ -1.59
LINC00342-201ENST00000412393 FCRL5Q96RD9 977 aa5.13□□□□□ -1.59
LINC00342-201ENST00000412393 CYTH2Q99418 400 aa5.13□□□□□ -1.59
LINC00342-201ENST00000412393 VAT1Q99536 393 aa5.13□□□□□ -1.59
LINC00342-201ENST00000412393 FERMT1Q9BQL6 677 aa5.13□□□□□ -1.59
LINC00342-201ENST00000412393 HERPUD2Q9BSE4 406 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms