RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 AHRP35869 848 aa5.06□□□□□ -1.6
HERC4-205ENST00000412272 NDUFV1P49821 464 aa5.06□□□□□ -1.6
HERC4-205ENST00000412272 TAS2R40P59535 323 aa5.06□□□□□ -1.6
HERC4-205ENST00000412272 TRA2BP62995 288 aaKnown RBP5.06□□□□□ -1.6
HERC4-205ENST00000412272 NHLH2Q02577 135 aa5.06□□□□□ -1.6
HERC4-205ENST00000412272 TOMM34Q15785 309 aaPredicted RBP5.06□□□□□ -1.6
HERC4-205ENST00000412272 LRRC38Q5VT99 294 aa5.06□□□□□ -1.6
HERC4-205ENST00000412272 ZDHHC20Q5W0Z9 365 aa5.06□□□□□ -1.6
HERC4-205ENST00000412272 OR10A7Q8NGE5 316 aa5.06□□□□□ -1.6
HERC4-205ENST00000412272 OTUB2Q96DC9 234 aa5.06□□□□□ -1.6
HERC4-205ENST00000412272 HMCESQ96FZ2 354 aa5.06□□□□□ -1.6
HERC4-205ENST00000412272 RDH12Q96NR8 316 aa5.06□□□□□ -1.6
HERC4-205ENST00000412272 IFT27Q9BW83 186 aa5.06□□□□□ -1.6
HERC4-205ENST00000412272 GSX2Q9BZM3 304 aa5.06□□□□□ -1.6
HERC4-205ENST00000412272 SLC6A16Q9GZN6 736 aa5.06□□□□□ -1.6
HERC4-205ENST00000412272 ACP6Q9NPH0 428 aa5.06□□□□□ -1.6
HERC4-205ENST00000412272 DNAJB9Q9UBS3 223 aa5.06□□□□□ -1.6
HERC4-205ENST00000412272 DNAJB11Q9UBS4 358 aa5.06□□□□□ -1.6
HERC4-205ENST00000412272 AASSQ9UDR5 926 aa5.06□□□□□ -1.6
HERC4-205ENST00000412272 PUS1Q9Y606 427 aaKnown RBP eCLIP5.06□□□□□ -1.6
HERC4-205ENST00000412272 PRAMEF22A3QJZ6 481 aa5.06□□□□□ -1.6
HERC4-205ENST00000412272 URADA6NGE7 173 aa5.06□□□□□ -1.6
HERC4-205ENST00000412272 M0QZ92 97 aa5.06□□□□□ -1.6
HERC4-205ENST00000412272 SCAMP3O14828 347 aaKnown RBP5.06□□□□□ -1.6
HERC4-205ENST00000412272 DLEU1O43261 78 aa5.06□□□□□ -1.6
HERC4-205ENST00000412272 IFNA10P01566 189 aa5.06□□□□□ -1.6
HERC4-205ENST00000412272 SERPINE1P05121 402 aa5.06□□□□□ -1.6
HERC4-205ENST00000412272 APRTP07741 180 aa5.06□□□□□ -1.6
HERC4-205ENST00000412272 FHP07954 510 aa5.06□□□□□ -1.6
HERC4-205ENST00000412272 STAG3L1P0CL83 205 aa5.06□□□□□ -1.6
HERC4-205ENST00000412272 GMPSP49915 693 aaPredicted RBP5.06□□□□□ -1.6
HERC4-205ENST00000412272 CLCN7P51798 805 aa5.06□□□□□ -1.6
HERC4-205ENST00000412272 METAP1P53582 386 aa5.06□□□□□ -1.6
HERC4-205ENST00000412272 ELAVL2Q12926 359 aaKnown RBP5.06□□□□□ -1.6
HERC4-205ENST00000412272 MEP1AQ16819 746 aa5.06□□□□□ -1.6
HERC4-205ENST00000412272 PNLIPRP3Q17RR3 467 aa5.06□□□□□ -1.6
HERC4-205ENST00000412272 ZNF674Q2M3X9 581 aa5.06□□□□□ -1.6
HERC4-205ENST00000412272 RGS7BPQ6MZT1 257 aaPredicted RBP5.06□□□□□ -1.6
HERC4-205ENST00000412272 ACSM5Q6NUN0 579 aa5.06□□□□□ -1.6
HERC4-205ENST00000412272 PAMR1Q6UXH9 720 aa5.06□□□□□ -1.6
HERC4-205ENST00000412272 GK5Q6ZS86 529 aa5.06□□□□□ -1.6
HERC4-205ENST00000412272 RDH10Q8IZV5 341 aa5.06□□□□□ -1.6
HERC4-205ENST00000412272 SLC44A5Q8NCS7 719 aa5.06□□□□□ -1.6
HERC4-205ENST00000412272 OR8D4Q8NGM9 314 aa5.06□□□□□ -1.6
HERC4-205ENST00000412272 CYGBQ8WWM9 190 aa5.06□□□□□ -1.6
HERC4-205ENST00000412272 SLC5A5Q92911 643 aa5.06□□□□□ -1.6
HERC4-205ENST00000412272 MRGPRX4Q96LA9 322 aa5.06□□□□□ -1.6
HERC4-205ENST00000412272 ZNF599Q96NL3 588 aa5.06□□□□□ -1.6
HERC4-205ENST00000412272 FAM118BQ9BPY3 351 aa5.06□□□□□ -1.6
HERC4-205ENST00000412272 DERL2Q9GZP9 239 aa5.06□□□□□ -1.6
HERC4-205ENST00000412272 IL19Q9UHD0 177 aa5.06□□□□□ -1.6
HERC4-205ENST00000412272 KCPQ6ZWJ8 1503 aa5.06□□□□□ -1.6
HERC4-205ENST00000412272 CXorf65A6NEN9 183 aa5.05□□□□□ -1.6
HERC4-205ENST00000412272 GRID2O43424 1007 aa5.05□□□□□ -1.6
HERC4-205ENST00000412272 PRKYO43930 277 aa5.05□□□□□ -1.6
HERC4-205ENST00000412272 PRPSAP2O60256 369 aa5.05□□□□□ -1.6
HERC4-205ENST00000412272 OR10H2O60403 315 aa5.05□□□□□ -1.6
HERC4-205ENST00000412272 MMP20O60882 483 aa5.05□□□□□ -1.6
HERC4-205ENST00000412272 SRP72O76094 671 aaKnown RBP5.05□□□□□ -1.6
HERC4-205ENST00000412272 CSTAP01040 98 aa5.05□□□□□ -1.6
HERC4-205ENST00000412272 IFNA7P01567 189 aa5.05□□□□□ -1.6
HERC4-205ENST00000412272 SERPINA5P05154 406 aa5.05□□□□□ -1.6
HERC4-205ENST00000412272 PRR35P0CG20 571 aa5.05□□□□□ -1.6
HERC4-205ENST00000412272 HOXA9P31269 272 aa5.05□□□□□ -1.6
HERC4-205ENST00000412272 PTGER2P43116 358 aa5.05□□□□□ -1.6
HERC4-205ENST00000412272 HTR5AP47898 357 aa5.05□□□□□ -1.6
HERC4-205ENST00000412272 BCAT1P54687 386 aa5.05□□□□□ -1.6
HERC4-205ENST00000412272 VEZF1Q14119 521 aa5.05□□□□□ -1.6
HERC4-205ENST00000412272 FASTKQ14296 549 aaKnown RBP5.05□□□□□ -1.6
HERC4-205ENST00000412272 MPEG1Q2M385 716 aa5.05□□□□□ -1.6
HERC4-205ENST00000412272 CYBRD1Q53TN4 286 aa5.05□□□□□ -1.6
HERC4-205ENST00000412272 PRR5LQ6MZQ0 368 aa5.05□□□□□ -1.6
HERC4-205ENST00000412272 ZNF790Q6PG37 636 aa5.05□□□□□ -1.6
HERC4-205ENST00000412272 PADI6Q6TGC4 694 aa5.05□□□□□ -1.6
HERC4-205ENST00000412272 R3HCC1LQ7Z5L2 792 aaKnown RBP5.05□□□□□ -1.6
HERC4-205ENST00000412272 MCEMP1Q8IX19 187 aa5.05□□□□□ -1.6
HERC4-205ENST00000412272 DNAJC10Q8IXB1 793 aa5.05□□□□□ -1.6
HERC4-205ENST00000412272 FAM71AQ8IYT1 594 aa5.05□□□□□ -1.6
HERC4-205ENST00000412272 OR6J1Q8NGC5 347 aa5.05□□□□□ -1.6
HERC4-205ENST00000412272 OR2L8Q8NGY9 312 aa5.05□□□□□ -1.6
HERC4-205ENST00000412272 WDR36Q8NI36 951 aaKnown RBP5.05□□□□□ -1.6
HERC4-205ENST00000412272 FAR1Q8WVX9 515 aa5.05□□□□□ -1.6
HERC4-205ENST00000412272 ISL2Q96A47 359 aa5.05□□□□□ -1.6
HERC4-205ENST00000412272 FAM71F1Q96KD3 344 aaPredicted RBP5.05□□□□□ -1.6
HERC4-205ENST00000412272 MARK4Q96L34 752 aa5.05□□□□□ -1.6
HERC4-205ENST00000412272 GGACTQ9BVM4 153 aa5.05□□□□□ -1.6
HERC4-205ENST00000412272 FGFBP2Q9BYJ0 223 aa5.05□□□□□ -1.6
HERC4-205ENST00000412272 WDR26Q9H7D7 661 aa5.05□□□□□ -1.6
HERC4-205ENST00000412272 FAM120CQ9NX05 1096 aaKnown RBP5.05□□□□□ -1.6
HERC4-205ENST00000412272 ERVW-1Q9UQF0 538 aa5.05□□□□□ -1.6
HERC4-205ENST00000412272 AKT3Q9Y243 479 aa5.05□□□□□ -1.6
HERC4-205ENST00000412272 SLC6A5Q9Y345 797 aa5.05□□□□□ -1.6
HERC4-205ENST00000412272 TEX264Q9Y6I9 313 aa5.05□□□□□ -1.6
HERC4-205ENST00000412272 CTNSO60931 367 aa5.05□□□□□ -1.6
HERC4-205ENST00000412272 CTAG2O75638 210 aa5.05□□□□□ -1.6
HERC4-205ENST00000412272 CFDP00746 253 aaPredicted RBP5.05□□□□□ -1.6
HERC4-205ENST00000412272 NR3C1P04150 777 aa5.05□□□□□ -1.6
HERC4-205ENST00000412272 ANXA7P20073 488 aaKnown RBP5.05□□□□□ -1.6
HERC4-205ENST00000412272 PCSK1P29120 753 aa5.05□□□□□ -1.6
HERC4-205ENST00000412272 CD6P30203 668 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms