RNA–Protein interactions for RNA: ENST00000411527.5

HLA-DQB2-229, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 1,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-229ENST00000411527 CAPN13Q6MZZ7 669 aaPredicted RBP13.39□□□□□ -0.27
HLA-DQB2-229ENST00000411527 MEX3BQ6ZN04 569 aaKnown RBP13.39□□□□□ -0.27
HLA-DQB2-229ENST00000411527 PIWIL4Q7Z3Z4 852 aaKnown RBP13.39□□□□□ -0.27
HLA-DQB2-229ENST00000411527 ASPGQ86U10 573 aa13.39□□□□□ -0.27
HLA-DQB2-229ENST00000411527 RPS19BP1Q86WX3 136 aaKnown RBP13.39□□□□□ -0.27
HLA-DQB2-229ENST00000411527 DENND6AQ8IWF6 608 aa13.39□□□□□ -0.27
HLA-DQB2-229ENST00000411527 CHERPQ8IWX8 916 aaKnown RBP13.39□□□□□ -0.27
HLA-DQB2-229ENST00000411527 LGI4Q8N135 537 aa13.39□□□□□ -0.27
HLA-DQB2-229ENST00000411527 CA5BP1Q8WTZ4 195 aa13.39□□□□□ -0.27
HLA-DQB2-229ENST00000411527 PHF10Q8WUB8 498 aaKnown RBP13.39□□□□□ -0.27
HLA-DQB2-229ENST00000411527 KCNJ9Q92806 393 aa13.39□□□□□ -0.27
HLA-DQB2-229ENST00000411527 TSLPQ969D9 159 aa13.39□□□□□ -0.27
HLA-DQB2-229ENST00000411527 ALKBH8Q96BT7 664 aaKnown RBP13.39□□□□□ -0.27
HLA-DQB2-229ENST00000411527 SDCCAG3Q96C92 435 aa13.39□□□□□ -0.27
HLA-DQB2-229ENST00000411527 DMRTA2Q96SC8 542 aa13.39□□□□□ -0.27
HLA-DQB2-229ENST00000411527 GPR21Q99679 349 aa13.39□□□□□ -0.27
HLA-DQB2-229ENST00000411527 VKORC1Q9BQB6 163 aa13.39□□□□□ -0.27
HLA-DQB2-229ENST00000411527 PCBD2Q9H0N5 130 aa13.39□□□□□ -0.27
HLA-DQB2-229ENST00000411527 MCCC2Q9HCC0 563 aa13.39□□□□□ -0.27
HLA-DQB2-229ENST00000411527 LANCL2Q9NS86 450 aa13.39□□□□□ -0.27
HLA-DQB2-229ENST00000411527 SAMD15Q9P1V8 674 aa13.39□□□□□ -0.27
HLA-DQB2-229ENST00000411527 SH2B3Q9UQQ2 575 aa13.39□□□□□ -0.27
HLA-DQB2-229ENST00000411527 SLC22A7Q9Y694 548 aa13.39□□□□□ -0.27
HLA-DQB2-229ENST00000411527 MAGEB17A8MXT2 336 aa13.38□□□□□ -0.27
HLA-DQB2-229ENST00000411527 ADAM10O14672 748 aa13.38□□□□□ -0.27
HLA-DQB2-229ENST00000411527 SLC25A12O75746 678 aa13.38□□□□□ -0.27
HLA-DQB2-229ENST00000411527 TSPAN12O95859 305 aa13.38□□□□□ -0.27
HLA-DQB2-229ENST00000411527 ZNF24P17028 368 aa13.38□□□□□ -0.27
HLA-DQB2-229ENST00000411527 IL10P22301 178 aa13.38□□□□□ -0.27
HLA-DQB2-229ENST00000411527 GRK3P35626 688 aa13.38□□□□□ -0.27
HLA-DQB2-229ENST00000411527 TRIP13Q15645 432 aaPredicted RBP13.38□□□□□ -0.27
HLA-DQB2-229ENST00000411527 SPNS3Q6ZMD2 512 aa13.38□□□□□ -0.27
HLA-DQB2-229ENST00000411527 C17orf64Q86WR6 236 aa13.38□□□□□ -0.27
HLA-DQB2-229ENST00000411527 CPNE9Q8IYJ1 553 aa13.38□□□□□ -0.27
HLA-DQB2-229ENST00000411527 EID3Q8N140 333 aa13.38□□□□□ -0.27
HLA-DQB2-229ENST00000411527 KIF2BQ8N4N8 673 aa13.38□□□□□ -0.27
HLA-DQB2-229ENST00000411527 CPSF7Q8N684 471 aaKnown RBP13.38□□□□□ -0.27
HLA-DQB2-229ENST00000411527 OR5T3Q8NGG3 340 aa13.38□□□□□ -0.27
HLA-DQB2-229ENST00000411527 ELP5Q8TE02 316 aa13.38□□□□□ -0.27
HLA-DQB2-229ENST00000411527 ZNF669Q96BR6 464 aaPredicted RBP13.38□□□□□ -0.27
HLA-DQB2-229ENST00000411527 OR1F2PQ96R84 312 aa13.38□□□□□ -0.27
HLA-DQB2-229ENST00000411527 FAM129AQ9BZQ8 928 aa13.38□□□□□ -0.27
HLA-DQB2-229ENST00000411527 ATG10Q9H0Y0 220 aa13.38□□□□□ -0.27
HLA-DQB2-229ENST00000411527 IGSF5Q9NSI5 407 aa13.38□□□□□ -0.27
HLA-DQB2-229ENST00000411527 PPT2Q9UMR5 302 aa13.38□□□□□ -0.27
HLA-DQB2-229ENST00000411527 ASB1Q9Y576 335 aa13.38□□□□□ -0.27
HLA-DQB2-229ENST00000411527 FAM237BA0A1B0GVD1 139 aa13.37□□□□□ -0.27
HLA-DQB2-229ENST00000411527 MAGEB16A2A368 324 aa13.37□□□□□ -0.27
HLA-DQB2-229ENST00000411527 NME2P1O60361 137 aa13.37□□□□□ -0.27
HLA-DQB2-229ENST00000411527 FGGP02679 453 aa13.37□□□□□ -0.27
HLA-DQB2-229ENST00000411527 FHP07954 510 aa13.37□□□□□ -0.27
HLA-DQB2-229ENST00000411527 SLC35G6P0C7Q6 338 aa13.37□□□□□ -0.27
HLA-DQB2-229ENST00000411527 NME2P22392 152 aa13.37□□□□□ -0.27
HLA-DQB2-229ENST00000411527 TPP2P29144 1249 aaPredicted RBP13.37□□□□□ -0.27
HLA-DQB2-229ENST00000411527 CYB561P49447 251 aa13.37□□□□□ -0.27
HLA-DQB2-229ENST00000411527 VPS41P49754 854 aa13.37□□□□□ -0.27
HLA-DQB2-229ENST00000411527 NAE1Q13564 534 aa13.37□□□□□ -0.27
HLA-DQB2-229ENST00000411527 HERC3Q15034 1050 aa13.37□□□□□ -0.27
HLA-DQB2-229ENST00000411527 ARMC3Q5W041 872 aa13.37□□□□□ -0.27
HLA-DQB2-229ENST00000411527 AGTRAPQ6RW13 159 aa13.37□□□□□ -0.27
HLA-DQB2-229ENST00000411527 FGD2Q7Z6J4 655 aa13.37□□□□□ -0.27
HLA-DQB2-229ENST00000411527 CAND1Q86VP6 1230 aaKnown RBP13.37□□□□□ -0.27
HLA-DQB2-229ENST00000411527 CYP4X1Q8N118 509 aa13.37□□□□□ -0.27
HLA-DQB2-229ENST00000411527 MFSD9Q8NBP5 474 aa13.37□□□□□ -0.27
HLA-DQB2-229ENST00000411527 CD200R1Q8TD46 325 aa13.37□□□□□ -0.27
HLA-DQB2-229ENST00000411527 MAIP1Q8WWC4 291 aa13.37□□□□□ -0.27
HLA-DQB2-229ENST00000411527 OLFM1Q99784 485 aa13.37□□□□□ -0.27
HLA-DQB2-229ENST00000411527 COQ3Q9NZJ6 369 aa13.37□□□□□ -0.27
HLA-DQB2-229ENST00000411527 ADAMTS6Q9UKP5 1117 aa13.37□□□□□ -0.27
HLA-DQB2-229ENST00000411527 ZKSCAN5Q9Y2L8 839 aa13.37□□□□□ -0.27
HLA-DQB2-229ENST00000411527 NEU2Q9Y3R4 380 aa13.37□□□□□ -0.27
HLA-DQB2-229ENST00000411527 CDK2AP1O14519 115 aa13.36□□□□□ -0.27
HLA-DQB2-229ENST00000411527 B4GALT2O60909 372 aa13.36□□□□□ -0.27
HLA-DQB2-229ENST00000411527 DNAJB6O75190 326 aa13.36□□□□□ -0.27
HLA-DQB2-229ENST00000411527 HAUS5O94927 633 aa13.36□□□□□ -0.27
HLA-DQB2-229ENST00000411527 CDH1P12830 882 aa13.36□□□□□ -0.27
HLA-DQB2-229ENST00000411527 PTGER1P34995 402 aa13.36□□□□□ -0.27
HLA-DQB2-229ENST00000411527 SLC1A2P43004 574 aa13.36□□□□□ -0.27
HLA-DQB2-229ENST00000411527 OLR1P78380 273 aa13.36□□□□□ -0.27
HLA-DQB2-229ENST00000411527 MPP1Q00013 466 aa13.36□□□□□ -0.27
HLA-DQB2-229ENST00000411527 GPS1Q13098 491 aa13.36□□□□□ -0.27
HLA-DQB2-229ENST00000411527 ANKRD22Q5VYY1 191 aa13.36□□□□□ -0.27
HLA-DQB2-229ENST00000411527 LCTLQ6UWM7 567 aa13.36□□□□□ -0.27
HLA-DQB2-229ENST00000411527 MBOAT1Q6ZNC8 495 aa13.36□□□□□ -0.27
HLA-DQB2-229ENST00000411527 ZNF227Q86WZ6 799 aa13.36□□□□□ -0.27
HLA-DQB2-229ENST00000411527 ACBD4Q8NC06 268 aa13.36□□□□□ -0.27
HLA-DQB2-229ENST00000411527 EEF1AKMT1Q8WVE0 214 aa13.36□□□□□ -0.27
HLA-DQB2-229ENST00000411527 TMEM125Q96AQ2 219 aa13.36□□□□□ -0.27
HLA-DQB2-229ENST00000411527 TBC1D20Q96BZ9 403 aa13.36□□□□□ -0.27
HLA-DQB2-229ENST00000411527 PTCHD1Q96NR3 888 aa13.36□□□□□ -0.27
HLA-DQB2-229ENST00000411527 RBSNQ9H1K0 784 aa13.36□□□□□ -0.27
HLA-DQB2-229ENST00000411527 PDE10AQ9Y233 779 aa13.36□□□□□ -0.27
HLA-DQB2-229ENST00000411527 COMMD10Q9Y6G5 202 aa13.36□□□□□ -0.27
HLA-DQB2-229ENST00000411527 A0A1B0GTH9 108 aa13.35□□□□□ -0.27
HLA-DQB2-229ENST00000411527 ZCWPW2A0A1B0GU75 182 aa13.35□□□□□ -0.27
HLA-DQB2-229ENST00000411527 SDR42E2A6NKP2 422 aa13.35□□□□□ -0.27
HLA-DQB2-229ENST00000411527 EIF3FO00303 357 aaPredicted RBP13.35□□□□□ -0.27
HLA-DQB2-229ENST00000411527 FANCGO15287 622 aa13.35□□□□□ -0.27
HLA-DQB2-229ENST00000411527 NDUFS4O43181 175 aa13.35□□□□□ -0.27
HLA-DQB2-229ENST00000411527 CHST10O43529 356 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms