RNA–Protein interactions for RNA: ENST00000409458.3

GPNMB-203, Transcript of glycoprotein nmb, humanhuman

TSL 1 (best) BASIC

Gene GPNMB, Length 1,673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-203ENST00000409458 ZIC1Q15915 447 aa13.44□□□□□ -0.26
GPNMB-203ENST00000409458 MAPKAPK3Q16644 382 aa13.44□□□□□ -0.26
GPNMB-203ENST00000409458 DEFB133Q30KQ1 61 aa13.44□□□□□ -0.26
GPNMB-203ENST00000409458 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.44□□□□□ -0.26
GPNMB-203ENST00000409458 ANKRD26P1Q6NSI1 321 aa13.44□□□□□ -0.26
GPNMB-203ENST00000409458 DNAJC14Q6Y2X3 702 aaPredicted RBP13.44□□□□□ -0.26
GPNMB-203ENST00000409458 C1orf210Q8IVY1 113 aa13.44□□□□□ -0.26
GPNMB-203ENST00000409458 RBM12BQ8IXT5 1001 aaKnown RBP13.44□□□□□ -0.26
GPNMB-203ENST00000409458 SLC15A3Q8IY34 581 aa13.44□□□□□ -0.26
GPNMB-203ENST00000409458 MFSD9Q8NBP5 474 aa13.44□□□□□ -0.26
GPNMB-203ENST00000409458 DNAJB14Q8TBM8 379 aa13.44□□□□□ -0.26
GPNMB-203ENST00000409458 GAB3Q8WWW8 586 aa13.44□□□□□ -0.26
GPNMB-203ENST00000409458 NELL1Q92832 810 aa13.44□□□□□ -0.26
GPNMB-203ENST00000409458 TMEM125Q96AQ2 219 aa13.44□□□□□ -0.26
GPNMB-203ENST00000409458 EVA1BQ9NVM1 165 aa13.44□□□□□ -0.26
GPNMB-203ENST00000409458 CD300AQ9UGN4 299 aa13.44□□□□□ -0.26
GPNMB-203ENST00000409458 SNX7Q9UNH6 387 aa13.44□□□□□ -0.26
GPNMB-203ENST00000409458 PCDHGA4Q9Y5G9 962 aa13.44□□□□□ -0.26
GPNMB-203ENST00000409458 PCDHA9Q9Y5H5 950 aa13.44□□□□□ -0.26
GPNMB-203ENST00000409458 C2orf74A8MZ97 194 aa13.44□□□□□ -0.26
GPNMB-203ENST00000409458 ZW10O43264 779 aa13.44□□□□□ -0.26
GPNMB-203ENST00000409458 NOBOXO60393 691 aa13.44□□□□□ -0.26
GPNMB-203ENST00000409458 KRT36O76013 467 aa13.44□□□□□ -0.26
GPNMB-203ENST00000409458 KCNH1O95259 989 aa13.44□□□□□ -0.26
GPNMB-203ENST00000409458 COX7A2P14406 83 aa13.44□□□□□ -0.26
GPNMB-203ENST00000409458 TPP2P29144 1249 aaPredicted RBP13.44□□□□□ -0.26
GPNMB-203ENST00000409458 BSGP35613 385 aa13.44□□□□□ -0.26
GPNMB-203ENST00000409458 AHRP35869 848 aa13.44□□□□□ -0.26
GPNMB-203ENST00000409458 LSSP48449 732 aa13.44□□□□□ -0.26
GPNMB-203ENST00000409458 PPP1CAP62136 330 aa13.44□□□□□ -0.26
GPNMB-203ENST00000409458 SNCBQ16143 134 aa13.44□□□□□ -0.26
GPNMB-203ENST00000409458 RABL3Q5HYI8 236 aa13.44□□□□□ -0.26
GPNMB-203ENST00000409458 SAMD4BQ5PRF9 694 aaKnown RBP13.44□□□□□ -0.26
GPNMB-203ENST00000409458 OR4F3Q6IEY1 312 aa13.44□□□□□ -0.26
GPNMB-203ENST00000409458 SPESP1Q6UW49 350 aa13.44□□□□□ -0.26
GPNMB-203ENST00000409458 UBE3DQ7Z6J8 389 aa13.44□□□□□ -0.26
GPNMB-203ENST00000409458 PACS2Q86VP3 889 aa13.44□□□□□ -0.26
GPNMB-203ENST00000409458 ANKRD46Q86W74 232 aa13.44□□□□□ -0.26
GPNMB-203ENST00000409458 ARL14Q8N4G2 192 aa13.44□□□□□ -0.26
GPNMB-203ENST00000409458 TMEM105Q8N8V8 129 aa13.44□□□□□ -0.26
GPNMB-203ENST00000409458 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.44□□□□□ -0.26
GPNMB-203ENST00000409458 C16orf78Q8WTQ4 265 aa13.44□□□□□ -0.26
GPNMB-203ENST00000409458 RSC1A1Q92681 617 aa13.44□□□□□ -0.26
GPNMB-203ENST00000409458 PPM1MQ96MI6 270 aa13.44□□□□□ -0.26
GPNMB-203ENST00000409458 MACROD1Q9BQ69 325 aa13.44□□□□□ -0.26
GPNMB-203ENST00000409458 REXO4Q9GZR2 422 aaKnown RBP13.44□□□□□ -0.26
GPNMB-203ENST00000409458 LHX9Q9NQ69 397 aa13.44□□□□□ -0.26
GPNMB-203ENST00000409458 SERHLQ9NQF3 203 aa13.44□□□□□ -0.26
GPNMB-203ENST00000409458 HRASLS2Q9NWW9 162 aa13.44□□□□□ -0.26
GPNMB-203ENST00000409458 SUCOQ9UBS9 1254 aaKnown RBP13.44□□□□□ -0.26
GPNMB-203ENST00000409458 EXO1Q9UQ84 846 aaKnown RBP13.44□□□□□ -0.26
GPNMB-203ENST00000409458 ENTPD2Q9Y5L3 495 aa13.44□□□□□ -0.26
GPNMB-203ENST00000409458 AP1M2Q9Y6Q5 423 aa13.44□□□□□ -0.26
GPNMB-203ENST00000409458 MDC1Q14676 2089 aaKnown RBP13.43□□□□□ -0.26
GPNMB-203ENST00000409458 OR2A25A4D2G3 310 aa13.43□□□□□ -0.26
GPNMB-203ENST00000409458 OR5K3A6NET4 321 aa13.43□□□□□ -0.26
GPNMB-203ENST00000409458 C4orf51C9J302 202 aa13.43□□□□□ -0.26
GPNMB-203ENST00000409458 LMO7DNF2Z398 122 aa13.43□□□□□ -0.26
GPNMB-203ENST00000409458 PPM1DO15297 605 aa13.43□□□□□ -0.26
GPNMB-203ENST00000409458 TNFSF14O43557 240 aa13.43□□□□□ -0.26
GPNMB-203ENST00000409458 NPPAP01160 153 aa13.43□□□□□ -0.26
GPNMB-203ENST00000409458 PIM1P11309 404 aaPredicted RBP13.43□□□□□ -0.26
GPNMB-203ENST00000409458 GSTM2P28161 218 aa13.43□□□□□ -0.26
GPNMB-203ENST00000409458 HPCAL1P37235 193 aa13.43□□□□□ -0.26
GPNMB-203ENST00000409458 CTSKP43235 329 aa13.43□□□□□ -0.26
GPNMB-203ENST00000409458 KIR3DL1P43629 444 aa13.43□□□□□ -0.26
GPNMB-203ENST00000409458 FASLGP48023 281 aa13.43□□□□□ -0.26
GPNMB-203ENST00000409458 WNT3P56703 355 aa13.43□□□□□ -0.26
GPNMB-203ENST00000409458 MS4A2Q01362 244 aa13.43□□□□□ -0.26
GPNMB-203ENST00000409458 BNC1Q01954 994 aa13.43□□□□□ -0.26
GPNMB-203ENST00000409458 HYAL2Q12891 473 aa13.43□□□□□ -0.26
GPNMB-203ENST00000409458 SELPLGQ14242 412 aa13.43□□□□□ -0.26
GPNMB-203ENST00000409458 TEAD4Q15561 434 aa13.43□□□□□ -0.26
GPNMB-203ENST00000409458 SLC5A12Q1EHB4 618 aa13.43□□□□□ -0.26
GPNMB-203ENST00000409458 DPY19L1Q2PZI1 675 aa13.43□□□□□ -0.26
GPNMB-203ENST00000409458 GTDC1Q4AE62 458 aa13.43□□□□□ -0.26
GPNMB-203ENST00000409458 C6orf10Q5SRN2 563 aa13.43□□□□□ -0.26
GPNMB-203ENST00000409458 FCRL6Q6DN72 434 aa13.43□□□□□ -0.26
GPNMB-203ENST00000409458 NANOGP8Q6NSW7 305 aa13.43□□□□□ -0.26
GPNMB-203ENST00000409458 GPR180Q86V85 440 aa13.43□□□□□ -0.26
GPNMB-203ENST00000409458 OOSP2Q86WS3 158 aa13.43□□□□□ -0.26
GPNMB-203ENST00000409458 TBC1D19Q8N5T2 526 aa13.43□□□□□ -0.26
GPNMB-203ENST00000409458 HIPK4Q8NE63 616 aa13.43□□□□□ -0.26
GPNMB-203ENST00000409458 FCRL4Q96PJ5 515 aa13.43□□□□□ -0.26
GPNMB-203ENST00000409458 CGREF1Q99674 301 aa13.43□□□□□ -0.26
GPNMB-203ENST00000409458 KLHL25Q9H0H3 589 aa13.43□□□□□ -0.26
GPNMB-203ENST00000409458 NANOGQ9H9S0 305 aa13.43□□□□□ -0.26
GPNMB-203ENST00000409458 MYNNQ9NPC7 610 aa13.43□□□□□ -0.26
GPNMB-203ENST00000409458 TMEM74BQ9NUR3 256 aa13.43□□□□□ -0.26
GPNMB-203ENST00000409458 AHSPQ9NZD4 102 aa13.43□□□□□ -0.26
GPNMB-203ENST00000409458 VAPAQ9P0L0 249 aa13.43□□□□□ -0.26
GPNMB-203ENST00000409458 NKX1-2Q9UD57 310 aaPredicted RBP13.43□□□□□ -0.26
GPNMB-203ENST00000409458 MAN2B2Q9Y2E5 1009 aa13.43□□□□□ -0.26
GPNMB-203ENST00000409458 BTBD3Q9Y2F9 522 aa13.43□□□□□ -0.26
GPNMB-203ENST00000409458 SNX11Q9Y5W9 270 aa13.43□□□□□ -0.26
GPNMB-203ENST00000409458 KNL1Q8NG31 2342 aa13.42□□□□□ -0.26
GPNMB-203ENST00000409458 A0A1B0GTW7 788 aa13.42□□□□□ -0.26
GPNMB-203ENST00000409458 LRIT2A6NDA9 550 aa13.42□□□□□ -0.26
GPNMB-203ENST00000409458 H0Y3Z8 333 aa13.42□□□□□ -0.26
GPNMB-203ENST00000409458 DFNA5O60443 496 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms