RNA–Protein interactions for RNA: ENST00000409101.7

SCN3A-203, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SCN3A, Length 6,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-203ENST00000409101 PNCKQ6P2M8 343 aa4.85□□□□□ -1.63
SCN3A-203ENST00000409101 UNQ6126/PRO20091Q6UXV3 157 aa4.85□□□□□ -1.63
SCN3A-203ENST00000409101 GHDCQ8N2G8 530 aa4.85□□□□□ -1.63
SCN3A-203ENST00000409101 C2CD4AQ8NCU7 369 aaPredicted RBP4.85□□□□□ -1.63
SCN3A-203ENST00000409101 OR4F6Q8NGB9 312 aa4.85□□□□□ -1.63
SCN3A-203ENST00000409101 RADILQ96JH8 1075 aa4.85□□□□□ -1.63
SCN3A-203ENST00000409101 HAPLN2Q9GZV7 340 aa4.85□□□□□ -1.63
SCN3A-203ENST00000409101 PRPF19Q9UMS4 504 aaKnown RBP4.85□□□□□ -1.63
SCN3A-203ENST00000409101 RNF11Q9Y3C5 154 aa4.85□□□□□ -1.63
SCN3A-203ENST00000409101 OARD1Q9Y530 152 aa4.85□□□□□ -1.63
SCN3A-203ENST00000409101 STX16-NPEPL1H3BU86 382 aa4.84□□□□□ -1.63
SCN3A-203ENST00000409101 STX16O14662 325 aa4.84□□□□□ -1.63
SCN3A-203ENST00000409101 MPZL2O60487 215 aa4.84□□□□□ -1.63
SCN3A-203ENST00000409101 GADD45GO95257 159 aa4.84□□□□□ -1.63
SCN3A-203ENST00000409101 BCHEP06276 602 aa4.84□□□□□ -1.63
SCN3A-203ENST00000409101 ZNF28P17035 718 aa4.84□□□□□ -1.63
SCN3A-203ENST00000409101 GABRA3P34903 492 aa4.84□□□□□ -1.63
SCN3A-203ENST00000409101 IRS1P35568 1242 aa4.84□□□□□ -1.63
SCN3A-203ENST00000409101 PTGIRP43119 386 aa4.84□□□□□ -1.63
SCN3A-203ENST00000409101 TBPL1P62380 186 aa4.84□□□□□ -1.63
SCN3A-203ENST00000409101 ERVK-8P63133 956 aa4.84□□□□□ -1.63
SCN3A-203ENST00000409101 VLDLRP98155 873 aa4.84□□□□□ -1.63
SCN3A-203ENST00000409101 RBBP4Q09028 425 aa4.84□□□□□ -1.63
SCN3A-203ENST00000409101 DGUOKQ16854 277 aa4.84□□□□□ -1.63
SCN3A-203ENST00000409101 FLYWCH1Q4VC44 716 aa4.84□□□□□ -1.63
SCN3A-203ENST00000409101 ACSBG2Q5FVE4 666 aa4.84□□□□□ -1.63
SCN3A-203ENST00000409101 MPP7Q5T2T1 576 aa4.84□□□□□ -1.63
SCN3A-203ENST00000409101 TMEM225Q6GV28 225 aa4.84□□□□□ -1.63
SCN3A-203ENST00000409101 OR4C11Q6IEV9 310 aa4.84□□□□□ -1.63
SCN3A-203ENST00000409101 KIAA1211LQ6NV74 962 aa4.84□□□□□ -1.63
SCN3A-203ENST00000409101 GPAT4Q86UL3 456 aa4.84□□□□□ -1.63
SCN3A-203ENST00000409101 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.84□□□□□ -1.63
SCN3A-203ENST00000409101 COQ8BQ96D53 544 aa4.84□□□□□ -1.63
SCN3A-203ENST00000409101 ZFYVE21Q9BQ24 234 aa4.84□□□□□ -1.63
SCN3A-203ENST00000409101 ORAI3Q9BRQ5 295 aa4.84□□□□□ -1.63
SCN3A-203ENST00000409101 KCND1Q9NSA2 647 aa4.84□□□□□ -1.63
SCN3A-203ENST00000409101 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.84□□□□□ -1.63
SCN3A-203ENST00000409101 GRHPRQ9UBQ7 328 aa4.84□□□□□ -1.63
SCN3A-203ENST00000409101 SLC6A14Q9UN76 642 aa4.84□□□□□ -1.63
SCN3A-203ENST00000409101 GLOD5A6NK44 160 aa4.84□□□□□ -1.63
SCN3A-203ENST00000409101 CXCR6O00574 342 aa4.84□□□□□ -1.63
SCN3A-203ENST00000409101 RNF13O43567 381 aa4.84□□□□□ -1.63
SCN3A-203ENST00000409101 CD46P15529 392 aa4.84□□□□□ -1.63
SCN3A-203ENST00000409101 TCN2P20062 427 aa4.84□□□□□ -1.63
SCN3A-203ENST00000409101 GRIA1P42261 906 aa4.84□□□□□ -1.63
SCN3A-203ENST00000409101 CBX5P45973 191 aa4.84□□□□□ -1.63
SCN3A-203ENST00000409101 CCT3P49368 545 aaKnown RBP4.84□□□□□ -1.63
SCN3A-203ENST00000409101 UBE2NP61088 152 aaKnown RBP4.84□□□□□ -1.63
SCN3A-203ENST00000409101 CDK3Q00526 305 aa4.84□□□□□ -1.63
SCN3A-203ENST00000409101 CBX3Q13185 183 aa4.84□□□□□ -1.63
SCN3A-203ENST00000409101 SLAMF1Q13291 335 aa4.84□□□□□ -1.63
SCN3A-203ENST00000409101 NFE2L1Q14494 772 aa4.84□□□□□ -1.63
SCN3A-203ENST00000409101 DEFB110Q30KQ9 67 aa4.84□□□□□ -1.63
SCN3A-203ENST00000409101 TMEM35AQ53FP2 167 aa4.84□□□□□ -1.63
SCN3A-203ENST00000409101 TTMPQ5BVD1 217 aa4.84□□□□□ -1.63
SCN3A-203ENST00000409101 TXNRD3NBQ6F5E7 133 aa4.84□□□□□ -1.63
SCN3A-203ENST00000409101 SATL1Q86VE3 508 aa4.84□□□□□ -1.63
SCN3A-203ENST00000409101 HIPK1Q86Z02 1210 aa4.84□□□□□ -1.63
SCN3A-203ENST00000409101 SPPL2CQ8IUH8 684 aa4.84□□□□□ -1.63
SCN3A-203ENST00000409101 GALNT12Q8IXK2 581 aa4.84□□□□□ -1.63
SCN3A-203ENST00000409101 SYNPOQ8N3V7 929 aa4.84□□□□□ -1.63
SCN3A-203ENST00000409101 SLC35B2Q8TB61 432 aa4.84□□□□□ -1.63
SCN3A-203ENST00000409101 GIPC3Q8TF64 312 aa4.84□□□□□ -1.63
SCN3A-203ENST00000409101 KAT2AQ92830 837 aa4.84□□□□□ -1.63
SCN3A-203ENST00000409101 ARRDC3Q96B67 414 aa4.84□□□□□ -1.63
SCN3A-203ENST00000409101 MRGPRX2Q96LB1 330 aa4.84□□□□□ -1.63
SCN3A-203ENST00000409101 IL17FQ96PD4 163 aa4.84□□□□□ -1.63
SCN3A-203ENST00000409101 MRPS26Q9BYN8 205 aaKnown RBP4.84□□□□□ -1.63
SCN3A-203ENST00000409101 SP140LQ9H930 580 aa4.84□□□□□ -1.63
SCN3A-203ENST00000409101 PELI2Q9HAT8 420 aa4.84□□□□□ -1.63
SCN3A-203ENST00000409101 MARCH5Q9NX47 278 aa4.84□□□□□ -1.63
SCN3A-203ENST00000409101 CMTM6Q9NX76 183 aa4.84□□□□□ -1.63
SCN3A-203ENST00000409101 TMEM59LQ9UK28 342 aa4.84□□□□□ -1.63
SCN3A-203ENST00000409101 NENFQ9UMX5 172 aa4.84□□□□□ -1.63
SCN3A-203ENST00000409101 DHRS7Q9Y394 339 aa4.84□□□□□ -1.63
SCN3A-203ENST00000409101 PAPPA2Q9BXP8 1791 aa4.84□□□□□ -1.63
SCN3A-203ENST00000409101 C1orf226A1L170 272 aa4.84□□□□□ -1.63
SCN3A-203ENST00000409101 TLR4O00206 839 aa4.84□□□□□ -1.63
SCN3A-203ENST00000409101 SEC14L5O43304 696 aa4.84□□□□□ -1.63
SCN3A-203ENST00000409101 HCRTR2O43614 444 aa4.84□□□□□ -1.63
SCN3A-203ENST00000409101 PLIN3O60664 434 aa4.84□□□□□ -1.63
SCN3A-203ENST00000409101 ALDOAP04075 364 aaKnown RBP4.84□□□□□ -1.63
SCN3A-203ENST00000409101 GDF5P43026 501 aa4.84□□□□□ -1.63
SCN3A-203ENST00000409101 EMP2P54851 167 aa4.84□□□□□ -1.63
SCN3A-203ENST00000409101 YPEL5P62699 121 aa4.84□□□□□ -1.63
SCN3A-203ENST00000409101 HMGCS1Q01581 520 aa4.84□□□□□ -1.63
SCN3A-203ENST00000409101 EEF1A2Q05639 463 aaKnown RBP4.84□□□□□ -1.63
SCN3A-203ENST00000409101 DLX2Q07687 328 aaPredicted RBP4.84□□□□□ -1.63
SCN3A-203ENST00000409101 SCAPQ12770 1279 aa4.84□□□□□ -1.63
SCN3A-203ENST00000409101 ZSWIM7Q19AV6 140 aa4.84□□□□□ -1.63
SCN3A-203ENST00000409101 AP1ARQ63HQ0 302 aa4.84□□□□□ -1.63
SCN3A-203ENST00000409101 PM20D1Q6GTS8 502 aa4.84□□□□□ -1.63
SCN3A-203ENST00000409101 OR52E8Q6IFG1 317 aa4.84□□□□□ -1.63
SCN3A-203ENST00000409101 NXPE4Q6UWF7 544 aa4.84□□□□□ -1.63
SCN3A-203ENST00000409101 PARS2Q7L3T8 475 aaKnown RBP4.84□□□□□ -1.63
SCN3A-203ENST00000409101 ZNF550Q7Z398 422 aa4.84□□□□□ -1.63
SCN3A-203ENST00000409101 SCD5Q86SK9 330 aa4.84□□□□□ -1.63
SCN3A-203ENST00000409101 LRRC25Q8N386 305 aaPredicted RBP4.84□□□□□ -1.63
SCN3A-203ENST00000409101 LNX2Q8N448 690 aa4.84□□□□□ -1.63
SCN3A-203ENST00000409101 WDR60Q8WVS4 1066 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms