RNA–Protein interactions for RNA: ENST00000406659.3

DNMT3A-206, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 1,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-206ENST00000406659 UAP1L1Q3KQV9 507 aa23.65■■□□□ 1.38
DNMT3A-206ENST00000406659 ZNF385BQ569K4 471 aa23.65■■□□□ 1.38
DNMT3A-206ENST00000406659 CPZQ66K79 652 aa23.65■■□□□ 1.38
DNMT3A-206ENST00000406659 FAM71E1Q6IPT2 247 aa23.65■■□□□ 1.38
DNMT3A-206ENST00000406659 SLC9B2Q86UD5 537 aa23.65■■□□□ 1.38
DNMT3A-206ENST00000406659 RPLP0P6Q8NHW5 317 aa23.65■■□□□ 1.38
DNMT3A-206ENST00000406659 DNASE1L2Q92874 299 aa23.65■■□□□ 1.38
DNMT3A-206ENST00000406659 PPCDCQ96CD2 204 aa23.65■■□□□ 1.38
DNMT3A-206ENST00000406659 SCARF2Q96GP6 870 aaPredicted RBP23.65■■□□□ 1.38
DNMT3A-206ENST00000406659 XKR8Q9H6D3 395 aa23.65■■□□□ 1.38
DNMT3A-206ENST00000406659 MAGIXQ9H6Y5 334 aa23.65■■□□□ 1.38
DNMT3A-206ENST00000406659 TPT1P8Q9HAU6 139 aa23.65■■□□□ 1.38
DNMT3A-206ENST00000406659 CORO2BQ9UQ03 480 aa23.65■■□□□ 1.38
DNMT3A-206ENST00000406659 PRSS38A1L453 326 aa23.64■■□□□ 1.37
DNMT3A-206ENST00000406659 PRR19A6NJB7 356 aa23.64■■□□□ 1.37
DNMT3A-206ENST00000406659 H3BQ06 376 aaPredicted RBP23.64■■□□□ 1.37
DNMT3A-206ENST00000406659 EI24O14681 340 aa23.64■■□□□ 1.37
DNMT3A-206ENST00000406659 SCAMP1O15126 338 aa23.64■■□□□ 1.37
DNMT3A-206ENST00000406659 FURINP09958 794 aa23.64■■□□□ 1.37
DNMT3A-206ENST00000406659 HOXB6P17509 224 aaKnown RBP23.64■■□□□ 1.37
DNMT3A-206ENST00000406659 CLDN2P57739 230 aa23.64■■□□□ 1.37
DNMT3A-206ENST00000406659 KIAA1024LP59773 190 aa23.64■■□□□ 1.37
DNMT3A-206ENST00000406659 CYP4F2P78329 520 aa23.64■■□□□ 1.37
DNMT3A-206ENST00000406659 MYBPC1Q00872 1141 aa23.64■■□□□ 1.37
DNMT3A-206ENST00000406659 MC1RQ01726 317 aa23.64■■□□□ 1.37
DNMT3A-206ENST00000406659 COL19A1Q14993 1142 aa23.64■■□□□ 1.37
DNMT3A-206ENST00000406659 NKG7Q16617 165 aa23.64■■□□□ 1.37
DNMT3A-206ENST00000406659 IYDQ6PHW0 289 aa23.64■■□□□ 1.37
DNMT3A-206ENST00000406659 CARM1Q86X55 608 aa23.64■■□□□ 1.37
DNMT3A-206ENST00000406659 OR4K1Q8NGD4 311 aa23.64■■□□□ 1.37
DNMT3A-206ENST00000406659 TFAP2CQ92754 450 aa23.64■■□□□ 1.37
DNMT3A-206ENST00000406659 KCNK12Q9HB15 430 aa23.64■■□□□ 1.37
DNMT3A-206ENST00000406659 NTN4Q9HB63 628 aa23.64■■□□□ 1.37
DNMT3A-206ENST00000406659 FGF22Q9HCT0 170 aa23.64■■□□□ 1.37
DNMT3A-206ENST00000406659 PRDM8Q9NQV8 689 aa23.64■■□□□ 1.37
DNMT3A-206ENST00000406659 ZNF639Q9UID6 485 aa23.64■■□□□ 1.37
DNMT3A-206ENST00000406659 POM121BA6NF01 834 aa23.63■■□□□ 1.37
DNMT3A-206ENST00000406659 KLHL18O94889 574 aa23.63■■□□□ 1.37
DNMT3A-206ENST00000406659 CCNDBP1O95273 360 aa23.63■■□□□ 1.37
DNMT3A-206ENST00000406659 KCNK5O95279 499 aa23.63■■□□□ 1.37
DNMT3A-206ENST00000406659 C1QCP02747 245 aa23.63■■□□□ 1.37
DNMT3A-206ENST00000406659 IL1RNP18510 177 aa23.63■■□□□ 1.37
DNMT3A-206ENST00000406659 VMACQ2NL98 169 aa23.63■■□□□ 1.37
DNMT3A-206ENST00000406659 DEPDC1Q5TB30 811 aa23.63■■□□□ 1.37
DNMT3A-206ENST00000406659 KHDRBS2Q5VWX1 349 aaKnown RBP23.63■■□□□ 1.37
DNMT3A-206ENST00000406659 FKBP9P1Q75LS8 142 aa23.63■■□□□ 1.37
DNMT3A-206ENST00000406659 ZZZ3Q8IYH5 903 aa23.63■■□□□ 1.37
DNMT3A-206ENST00000406659 ANKRD53Q8N9V6 530 aa23.63■■□□□ 1.37
DNMT3A-206ENST00000406659 OR2L8Q8NGY9 312 aa23.63■■□□□ 1.37
DNMT3A-206ENST00000406659 PNPT1Q8TCS8 783 aaKnown RBP23.63■■□□□ 1.37
DNMT3A-206ENST00000406659 MTERF3Q96E29 417 aa23.63■■□□□ 1.37
DNMT3A-206ENST00000406659 OR2M4Q96R27 311 aa23.63■■□□□ 1.37
DNMT3A-206ENST00000406659 DNAJB9Q9UBS3 223 aa23.63■■□□□ 1.37
DNMT3A-206ENST00000406659 COL4A2P08572 1712 aa23.63■■□□□ 1.37
DNMT3A-206ENST00000406659 FEZF1A0PJY2 475 aa23.63■■□□□ 1.37
DNMT3A-206ENST00000406659 OR52A4PA6NMU1 304 aa23.63■■□□□ 1.37
DNMT3A-206ENST00000406659 SEMA3DO95025 777 aa23.63■■□□□ 1.37
DNMT3A-206ENST00000406659 PRSS23O95084 383 aa23.63■■□□□ 1.37
DNMT3A-206ENST00000406659 CST1P01037 141 aa23.63■■□□□ 1.37
DNMT3A-206ENST00000406659 NDUFV2P19404 249 aa23.63■■□□□ 1.37
DNMT3A-206ENST00000406659 IGFBP4P22692 258 aa23.63■■□□□ 1.37
DNMT3A-206ENST00000406659 PKLRP30613 574 aa23.63■■□□□ 1.37
DNMT3A-206ENST00000406659 RPS9P46781 194 aaKnown RBP23.63■■□□□ 1.37
DNMT3A-206ENST00000406659 PDE7AQ13946 482 aa23.63■■□□□ 1.37
DNMT3A-206ENST00000406659 CCNYL2Q5T2Q4 361 aa23.63■■□□□ 1.37
DNMT3A-206ENST00000406659 KRT80Q6KB66 452 aa23.63■■□□□ 1.37
DNMT3A-206ENST00000406659 TMEM92Q6UXU6 159 aa23.63■■□□□ 1.37
DNMT3A-206ENST00000406659 EID3Q8N140 333 aa23.63■■□□□ 1.37
DNMT3A-206ENST00000406659 DENND6BQ8NEG7 585 aa23.63■■□□□ 1.37
DNMT3A-206ENST00000406659 TMBIM1Q969X1 311 aa23.63■■□□□ 1.37
DNMT3A-206ENST00000406659 PYURFQ96I23 114 aa23.63■■□□□ 1.37
DNMT3A-206ENST00000406659 SORBS1Q9BX66 1292 aaKnown RBP23.63■■□□□ 1.37
DNMT3A-206ENST00000406659 MS4A8Q9BY19 250 aa23.63■■□□□ 1.37
DNMT3A-206ENST00000406659 ANKRD60Q9BZ19 345 aa23.63■■□□□ 1.37
DNMT3A-206ENST00000406659 ZNF696Q9H7X3 374 aa23.63■■□□□ 1.37
DNMT3A-206ENST00000406659 ZNF282Q9UDV7 671 aaPredicted RBP23.63■■□□□ 1.37
DNMT3A-206ENST00000406659 NUP214P35658 2090 aaPredicted RBP23.62■■□□□ 1.37
DNMT3A-206ENST00000406659 DLGAP1O14490 977 aa23.62■■□□□ 1.37
DNMT3A-206ENST00000406659 ABCB1P08183 1280 aaPredicted RBP23.62■■□□□ 1.37
DNMT3A-206ENST00000406659 MERTKQ12866 999 aa23.62■■□□□ 1.37
DNMT3A-206ENST00000406659 RPE65Q16518 533 aa23.62■■□□□ 1.37
DNMT3A-206ENST00000406659 ENPP7Q6UWV6 458 aa23.62■■□□□ 1.37
DNMT3A-206ENST00000406659 ISLR2Q6UXK2 745 aa23.62■■□□□ 1.37
DNMT3A-206ENST00000406659 IKBIPQ70UQ0 350 aa23.62■■□□□ 1.37
DNMT3A-206ENST00000406659 GPR155Q7Z3F1 870 aa23.62■■□□□ 1.37
DNMT3A-206ENST00000406659 ADCK2Q7Z695 626 aa23.62■■□□□ 1.37
DNMT3A-206ENST00000406659 MAGEE2Q8TD90 523 aaPredicted RBP23.62■■□□□ 1.37
DNMT3A-206ENST00000406659 F2RL3Q96RI0 385 aa23.62■■□□□ 1.37
DNMT3A-206ENST00000406659 MYCBPQ99417 103 aaPredicted RBP23.62■■□□□ 1.37
DNMT3A-206ENST00000406659 SPATA9Q9BWV2 254 aa23.62■■□□□ 1.37
DNMT3A-206ENST00000406659 SAMD4AQ9UPU9 718 aaKnown RBP23.62■■□□□ 1.37
DNMT3A-206ENST00000406659 HEBP2Q9Y5Z4 205 aa23.62■■□□□ 1.37
DNMT3A-206ENST00000406659 C1orf226A1L170 272 aa23.61■■□□□ 1.37
DNMT3A-206ENST00000406659 UPK1AO00322 258 aa23.61■■□□□ 1.37
DNMT3A-206ENST00000406659 GNGT2O14610 69 aa23.61■■□□□ 1.37
DNMT3A-206ENST00000406659 OR1F1O43749 312 aa23.61■■□□□ 1.37
DNMT3A-206ENST00000406659 IL3P08700 152 aa23.61■■□□□ 1.37
DNMT3A-206ENST00000406659 ACSL1P33121 698 aa23.61■■□□□ 1.37
DNMT3A-206ENST00000406659 PRDX1Q06830 199 aaKnown RBP23.61■■□□□ 1.37
DNMT3A-206ENST00000406659 FBXO43Q4G163 708 aa23.61■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms