RNA–Protein interactions for RNA: ENST00000406454.7

CACNA1C-222, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1C, Length 7,590 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-222ENST00000406454 NOXRED1Q6NXP6 359 aa12.87□□□□□ -0.35
CACNA1C-222ENST00000406454 RNF130Q86XS8 419 aa12.87□□□□□ -0.35
CACNA1C-222ENST00000406454 DENND1AQ8TEH3 1009 aa12.87□□□□□ -0.35
CACNA1C-222ENST00000406454 CNDP2Q96KP4 475 aaKnown RBP12.87□□□□□ -0.35
CACNA1C-222ENST00000406454 HERPUD2Q9BSE4 406 aa12.87□□□□□ -0.35
CACNA1C-222ENST00000406454 LDB2O43679 373 aa12.87□□□□□ -0.35
CACNA1C-222ENST00000406454 DHPSP49366 369 aaPredicted RBP12.87□□□□□ -0.35
CACNA1C-222ENST00000406454 CDKN2DP55273 166 aa12.87□□□□□ -0.35
CACNA1C-222ENST00000406454 TMEM126BQ8IUX1 230 aa12.87□□□□□ -0.35
CACNA1C-222ENST00000406454 OR8J3Q8NGG0 315 aa12.87□□□□□ -0.35
CACNA1C-222ENST00000406454 DZANK1Q9NVP4 752 aa12.87□□□□□ -0.35
CACNA1C-222ENST00000406454 PCDHGB1Q9Y5G3 927 aa12.87□□□□□ -0.35
CACNA1C-222ENST00000406454 TOPAZ1Q8N9V7 1692 aa12.87□□□□□ -0.35
CACNA1C-222ENST00000406454 CHRM1P11229 460 aaPredicted RBP12.87□□□□□ -0.35
CACNA1C-222ENST00000406454 CSF2RAP15509 400 aa12.87□□□□□ -0.35
CACNA1C-222ENST00000406454 MRPL10Q7Z7H8 261 aaKnown RBP12.87□□□□□ -0.35
CACNA1C-222ENST00000406454 AURKBQ96GD4 344 aaPredicted RBP12.87□□□□□ -0.35
CACNA1C-222ENST00000406454 KCTD7Q96MP8 289 aa12.87□□□□□ -0.35
CACNA1C-222ENST00000406454 TNFRSF10DQ9UBN6 386 aa12.87□□□□□ -0.35
CACNA1C-222ENST00000406454 ACSL5Q9ULC5 683 aa12.87□□□□□ -0.35
CACNA1C-222ENST00000406454 A0A075B6Q4 140 aa12.86□□□□□ -0.35
CACNA1C-222ENST00000406454 CAPN5O15484 640 aaPredicted RBP12.86□□□□□ -0.35
CACNA1C-222ENST00000406454 MATN1P21941 496 aa12.86□□□□□ -0.35
CACNA1C-222ENST00000406454 IRF5Q13568 498 aa12.86□□□□□ -0.35
CACNA1C-222ENST00000406454 PUM1Q14671 1186 aaKnown RBP eCLIP12.86□□□□□ -0.35
CACNA1C-222ENST00000406454 ARMCX6Q7L4S7 300 aa12.86□□□□□ -0.35
CACNA1C-222ENST00000406454 ZFAND4Q86XD8 727 aa12.86□□□□□ -0.35
CACNA1C-222ENST00000406454 RAB7BQ96AH8 199 aa12.86□□□□□ -0.35
CACNA1C-222ENST00000406454 SGIP1Q9BQI5 828 aa12.86□□□□□ -0.35
CACNA1C-222ENST00000406454 LGR4Q9BXB1 951 aa12.86□□□□□ -0.35
CACNA1C-222ENST00000406454 AIG1Q9NVV5 245 aa12.86□□□□□ -0.35
CACNA1C-222ENST00000406454 DNAJC25-GNG10A0A024R161 153 aa12.86□□□□□ -0.35
CACNA1C-222ENST00000406454 C1GALT1C1LP0DN25 315 aa12.86□□□□□ -0.35
CACNA1C-222ENST00000406454 PM20D1Q6GTS8 502 aa12.86□□□□□ -0.35
CACNA1C-222ENST00000406454 SLC22A15Q8IZD6 547 aa12.86□□□□□ -0.35
CACNA1C-222ENST00000406454 NCSTNQ92542 709 aa12.86□□□□□ -0.35
CACNA1C-222ENST00000406454 FBXL20Q96IG2 436 aa12.86□□□□□ -0.35
CACNA1C-222ENST00000406454 LYARQ9NX58 379 aaKnown RBP12.86□□□□□ -0.35
CACNA1C-222ENST00000406454 NUP188Q5SRE5 1749 aa12.86□□□□□ -0.35
CACNA1C-222ENST00000406454 H3BSA7 217 aa12.86□□□□□ -0.35
CACNA1C-222ENST00000406454 TBX1O43435 398 aa12.86□□□□□ -0.35
CACNA1C-222ENST00000406454 AKAP8O43823 692 aaKnown RBP12.86□□□□□ -0.35
CACNA1C-222ENST00000406454 CFIP05156 583 aa12.86□□□□□ -0.35
CACNA1C-222ENST00000406454 SHMT2P34897 504 aa12.86□□□□□ -0.35
CACNA1C-222ENST00000406454 ARSDP51689 593 aa12.86□□□□□ -0.35
CACNA1C-222ENST00000406454 FCHO2Q0JRZ9 810 aa12.86□□□□□ -0.35
CACNA1C-222ENST00000406454 FBXO42Q6P3S6 717 aa12.86□□□□□ -0.35
CACNA1C-222ENST00000406454 OR4K1Q8NGD4 311 aa12.86□□□□□ -0.35
CACNA1C-222ENST00000406454 SMPDL3BQ92485 455 aa12.86□□□□□ -0.35
CACNA1C-222ENST00000406454 PGAP3Q96FM1 320 aaPredicted RBP12.86□□□□□ -0.35
CACNA1C-222ENST00000406454 RGS17Q9UGC6 210 aaPredicted RBP12.86□□□□□ -0.35
CACNA1C-222ENST00000406454 PHF24Q9UPV7 400 aa12.86□□□□□ -0.35
CACNA1C-222ENST00000406454 LRRC42Q9Y546 428 aa12.86□□□□□ -0.35
CACNA1C-222ENST00000406454 FBXO43Q4G163 708 aa12.86□□□□□ -0.35
CACNA1C-222ENST00000406454 PAMR1Q6UXH9 720 aa12.86□□□□□ -0.35
CACNA1C-222ENST00000406454 NR4A3Q92570 626 aa12.86□□□□□ -0.35
CACNA1C-222ENST00000406454 ZNF778Q96MU6 729 aa12.86□□□□□ -0.35
CACNA1C-222ENST00000406454 C17orf62Q9BQA9 187 aa12.86□□□□□ -0.35
CACNA1C-222ENST00000406454 HERC2P3Q9BVR0 1158 aa12.86□□□□□ -0.35
CACNA1C-222ENST00000406454 TOR3AQ9H497 397 aa12.86□□□□□ -0.35
CACNA1C-222ENST00000406454 TUBA8Q9NY65 449 aaPredicted RBP12.86□□□□□ -0.35
CACNA1C-222ENST00000406454 H7BY64 318 aa12.86□□□□□ -0.35
CACNA1C-222ENST00000406454 ATG9BQ674R7 924 aa12.86□□□□□ -0.35
CACNA1C-222ENST00000406454 IQCF2Q8IXL9 164 aa12.86□□□□□ -0.35
CACNA1C-222ENST00000406454 OR52E4Q8NGH9 312 aa12.86□□□□□ -0.35
CACNA1C-222ENST00000406454 PXYLP1Q8TE99 480 aa12.86□□□□□ -0.35
CACNA1C-222ENST00000406454 ZFP3Q96NJ6 502 aa12.86□□□□□ -0.35
CACNA1C-222ENST00000406454 PRAP1Q96NZ9 151 aa12.86□□□□□ -0.35
CACNA1C-222ENST00000406454 SERINC1Q9NRX5 453 aa12.86□□□□□ -0.35
CACNA1C-222ENST00000406454 PTBP2Q9UKA9 531 aaKnown RBP12.86□□□□□ -0.35
CACNA1C-222ENST00000406454 M0QZQ0 153 aa12.86□□□□□ -0.35
CACNA1C-222ENST00000406454 HTRA2O43464 458 aaPredicted RBP12.86□□□□□ -0.35
CACNA1C-222ENST00000406454 PDYNP01213 254 aa12.86□□□□□ -0.35
CACNA1C-222ENST00000406454 APLP1P51693 650 aa12.86□□□□□ -0.35
CACNA1C-222ENST00000406454 MEP1AQ16819 746 aa12.86□□□□□ -0.35
CACNA1C-222ENST00000406454 ZNF648Q5T619 568 aaPredicted RBP12.86□□□□□ -0.35
CACNA1C-222ENST00000406454 REEP3Q6NUK4 255 aa12.86□□□□□ -0.35
CACNA1C-222ENST00000406454 NCEH1Q6PIU2 408 aa12.86□□□□□ -0.35
CACNA1C-222ENST00000406454 TMCO2Q7Z6W1 182 aaPredicted RBP12.86□□□□□ -0.35
CACNA1C-222ENST00000406454 MARCH9Q86YJ5 346 aa12.86□□□□□ -0.35
CACNA1C-222ENST00000406454 GALNT15Q8N3T1 639 aa12.86□□□□□ -0.35
CACNA1C-222ENST00000406454 MND1Q9BWT6 205 aa12.86□□□□□ -0.35
CACNA1C-222ENST00000406454 FKBP7Q9Y680 259 aa12.86□□□□□ -0.35
CACNA1C-222ENST00000406454 A0A096LPI6 279 aa12.85□□□□□ -0.35
CACNA1C-222ENST00000406454 ORC5O43913 435 aa12.85□□□□□ -0.35
CACNA1C-222ENST00000406454 ARCN1P48444 511 aaKnown RBP12.85□□□□□ -0.35
CACNA1C-222ENST00000406454 PITPNAQ00169 270 aa12.85□□□□□ -0.35
CACNA1C-222ENST00000406454 PRRT3Q5FWE3 981 aa12.85□□□□□ -0.35
CACNA1C-222ENST00000406454 SLC29A4Q7RTT9 530 aa12.85□□□□□ -0.35
CACNA1C-222ENST00000406454 GKN2Q86XP6 184 aa12.85□□□□□ -0.35
CACNA1C-222ENST00000406454 PTGR1Q14914 329 aa12.85□□□□□ -0.35
CACNA1C-222ENST00000406454 UBE2J2Q8N2K1 259 aa12.85□□□□□ -0.35
CACNA1C-222ENST00000406454 ZNF676Q8N7Q3 588 aa12.85□□□□□ -0.35
CACNA1C-222ENST00000406454 EPYCQ99645 322 aa12.85□□□□□ -0.35
CACNA1C-222ENST00000406454 DCSTAMPQ9H295 470 aa12.85□□□□□ -0.35
CACNA1C-222ENST00000406454 SLC2A4RGQ9NR83 387 aa12.85□□□□□ -0.35
CACNA1C-222ENST00000406454 TACSTD2P09758 323 aa12.85□□□□□ -0.35
CACNA1C-222ENST00000406454 PGGT1BP53609 377 aa12.85□□□□□ -0.35
CACNA1C-222ENST00000406454 LASP1Q14847 261 aaKnown RBP12.85□□□□□ -0.35
CACNA1C-222ENST00000406454 LINGO2Q7L985 606 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms