RNA–Protein interactions for RNA: ENST00000405578.8

RPAIN-204, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 1,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-204ENST00000405578 SSC4DQ8WTU2 575 aa10.08□□□□□ -0.8
RPAIN-204ENST00000405578 REPS1Q96D71 796 aa10.08□□□□□ -0.8
RPAIN-204ENST00000405578 PTCD3Q96EY7 689 aaKnown RBP10.08□□□□□ -0.8
RPAIN-204ENST00000405578 SEC16BQ96JE7 1060 aa10.08□□□□□ -0.8
RPAIN-204ENST00000405578 NDC1Q9BTX1 674 aa10.08□□□□□ -0.8
RPAIN-204ENST00000405578 C1QTNF3Q9BXJ4 246 aa10.08□□□□□ -0.8
RPAIN-204ENST00000405578 IPPKQ9H8X2 491 aa10.08□□□□□ -0.8
RPAIN-204ENST00000405578 FAM60AQ9NP50 221 aa10.08□□□□□ -0.8
RPAIN-204ENST00000405578 OXSMQ9NWU1 459 aa10.08□□□□□ -0.8
RPAIN-204ENST00000405578 SIDT1Q9NXL6 827 aaKnown RBP10.08□□□□□ -0.8
RPAIN-204ENST00000405578 PCTPQ9UKL6 214 aa10.08□□□□□ -0.8
RPAIN-204ENST00000405578 PCDHGA3Q9Y5H0 932 aa10.08□□□□□ -0.8
RPAIN-204ENST00000405578 HIVEP3Q5T1R4 2406 aa10.08□□□□□ -0.8
RPAIN-204ENST00000405578 SHANK1Q9Y566 2161 aa10.07□□□□□ -0.8
RPAIN-204ENST00000405578 TRBC2A0A5B9 178 aa10.07□□□□□ -0.8
RPAIN-204ENST00000405578 TMEM120BA0PK00 339 aa10.07□□□□□ -0.8
RPAIN-204ENST00000405578 E2F3O00716 465 aa10.07□□□□□ -0.8
RPAIN-204ENST00000405578 HAT1O14929 419 aa10.07□□□□□ -0.8
RPAIN-204ENST00000405578 ZSCAN9O15535 394 aaPredicted RBP10.07□□□□□ -0.8
RPAIN-204ENST00000405578 TRIM13O60858 407 aa10.07□□□□□ -0.8
RPAIN-204ENST00000405578 CLDN9O95484 217 aa10.07□□□□□ -0.8
RPAIN-204ENST00000405578 EIF2S1P05198 315 aaKnown RBP10.07□□□□□ -0.8
RPAIN-204ENST00000405578 RPS17P08708 135 aaKnown RBP10.07□□□□□ -0.8
RPAIN-204ENST00000405578 SLC35G6P0C7Q6 338 aa10.07□□□□□ -0.8
RPAIN-204ENST00000405578 RNF224P0DH78 156 aa10.07□□□□□ -0.8
RPAIN-204ENST00000405578 CREB1P16220 341 aa10.07□□□□□ -0.8
RPAIN-204ENST00000405578 SERPINB1P30740 379 aa10.07□□□□□ -0.8
RPAIN-204ENST00000405578 AHRP35869 848 aa10.07□□□□□ -0.8
RPAIN-204ENST00000405578 HNF4AP41235 474 aa10.07□□□□□ -0.8
RPAIN-204ENST00000405578 CASP2P42575 452 aa10.07□□□□□ -0.8
RPAIN-204ENST00000405578 SLC18A1P54219 525 aa10.07□□□□□ -0.8
RPAIN-204ENST00000405578 ARSFP54793 590 aa10.07□□□□□ -0.8
RPAIN-204ENST00000405578 MLLT10P55197 1068 aa10.07□□□□□ -0.8
RPAIN-204ENST00000405578 VSX2P58304 361 aaPredicted RBP10.07□□□□□ -0.8
RPAIN-204ENST00000405578 YBX1P67809 324 aaKnown RBP10.07□□□□□ -0.8
RPAIN-204ENST00000405578 PHEXP78562 749 aa10.07□□□□□ -0.8
RPAIN-204ENST00000405578 RGS1Q08116 209 aa10.07□□□□□ -0.8
RPAIN-204ENST00000405578 CHIT1Q13231 466 aa10.07□□□□□ -0.8
RPAIN-204ENST00000405578 SLBPQ14493 270 aaKnown RBP eCLIP10.07□□□□□ -0.8
RPAIN-204ENST00000405578 GRM7Q14831 915 aa10.07□□□□□ -0.8
RPAIN-204ENST00000405578 RBBP5Q15291 538 aaKnown RBP10.07□□□□□ -0.8
RPAIN-204ENST00000405578 DEFB110Q30KQ9 67 aa10.07□□□□□ -0.8
RPAIN-204ENST00000405578 FAM214AQ32MH5 1076 aa10.07□□□□□ -0.8
RPAIN-204ENST00000405578 LACTB2Q53H82 288 aaPredicted RBP10.07□□□□□ -0.8
RPAIN-204ENST00000405578 ZNF678Q5SXM1 525 aa10.07□□□□□ -0.8
RPAIN-204ENST00000405578 FHL5Q5TD97 284 aa10.07□□□□□ -0.8
RPAIN-204ENST00000405578 YOD1Q5VVQ6 348 aaPredicted RBP10.07□□□□□ -0.8
RPAIN-204ENST00000405578 LIPJQ5W064 366 aa10.07□□□□□ -0.8
RPAIN-204ENST00000405578 TMIGD1Q6UXZ0 262 aa10.07□□□□□ -0.8
RPAIN-204ENST00000405578 GOLGA7Q7Z5G4 137 aa10.07□□□□□ -0.8
RPAIN-204ENST00000405578 NUDCD3Q8IVD9 361 aa10.07□□□□□ -0.8
RPAIN-204ENST00000405578 IL22RA1Q8N6P7 574 aa10.07□□□□□ -0.8
RPAIN-204ENST00000405578 BMPERQ8N8U9 685 aa10.07□□□□□ -0.8
RPAIN-204ENST00000405578 CAMKVQ8NCB2 501 aa10.07□□□□□ -0.8
RPAIN-204ENST00000405578 TRPV3Q8NET8 790 aa10.07□□□□□ -0.8
RPAIN-204ENST00000405578 OR4K1Q8NGD4 311 aa10.07□□□□□ -0.8
RPAIN-204ENST00000405578 NKD1Q969G9 470 aa10.07□□□□□ -0.8
RPAIN-204ENST00000405578 TLCD1Q96CP7 247 aa10.07□□□□□ -0.8
RPAIN-204ENST00000405578 ZNF501Q96CX3 271 aaPredicted RBP10.07□□□□□ -0.8
RPAIN-204ENST00000405578 L3HYPDHQ96EM0 354 aa10.07□□□□□ -0.8
RPAIN-204ENST00000405578 CATSPER2Q96P56 530 aa10.07□□□□□ -0.8
RPAIN-204ENST00000405578 TMEM237Q96Q45 408 aa10.07□□□□□ -0.8
RPAIN-204ENST00000405578 CTRCQ99895 268 aa10.07□□□□□ -0.8
RPAIN-204ENST00000405578 SH3GL2Q99962 352 aa10.07□□□□□ -0.8
RPAIN-204ENST00000405578 PAIP2Q9BPZ3 127 aaKnown RBP10.07□□□□□ -0.8
RPAIN-204ENST00000405578 TRMOQ9BU70 441 aa10.07□□□□□ -0.8
RPAIN-204ENST00000405578 ULBP3Q9BZM4 244 aa10.07□□□□□ -0.8
RPAIN-204ENST00000405578 NT5DC2Q9H857 520 aa10.07□□□□□ -0.8
RPAIN-204ENST00000405578 NOL11Q9H8H0 719 aaKnown RBP10.07□□□□□ -0.8
RPAIN-204ENST00000405578 TXLNGQ9NUQ3 528 aa10.07□□□□□ -0.8
RPAIN-204ENST00000405578 SLC17A7Q9P2U7 560 aa10.07□□□□□ -0.8
RPAIN-204ENST00000405578 TNRC6AQ8NDV7 1962 aaKnown RBP10.06□□□□□ -0.8
RPAIN-204ENST00000405578 FEZF1A0PJY2 475 aa10.06□□□□□ -0.8
RPAIN-204ENST00000405578 URADA6NGE7 173 aa10.06□□□□□ -0.8
RPAIN-204ENST00000405578 ANKDD1BA6NHY2 528 aa10.06□□□□□ -0.8
RPAIN-204ENST00000405578 ZNF891A8MT65 544 aaPredicted RBP10.06□□□□□ -0.8
RPAIN-204ENST00000405578 H0YGG7 62 aa10.06□□□□□ -0.8
RPAIN-204ENST00000405578 BIRC5O15392 142 aa10.06□□□□□ -0.8
RPAIN-204ENST00000405578 CTSVO60911 334 aa10.06□□□□□ -0.8
RPAIN-204ENST00000405578 CRCPO75575 148 aa10.06□□□□□ -0.8
RPAIN-204ENST00000405578 SCRG1O75711 98 aa10.06□□□□□ -0.8
RPAIN-204ENST00000405578 SASH3O75995 380 aa10.06□□□□□ -0.8
RPAIN-204ENST00000405578 SERPIND1P05546 499 aa10.06□□□□□ -0.8
RPAIN-204ENST00000405578 BPGMP07738 259 aa10.06□□□□□ -0.8
RPAIN-204ENST00000405578 PRKAR1AP10644 381 aa10.06□□□□□ -0.8
RPAIN-204ENST00000405578 POU3F2P20265 443 aaPredicted RBP10.06□□□□□ -0.8
RPAIN-204ENST00000405578 VARSP26640 1264 aaKnown RBP10.06□□□□□ -0.8
RPAIN-204ENST00000405578 SERPINB5P36952 375 aa10.06□□□□□ -0.8
RPAIN-204ENST00000405578 SERPINB4P48594 390 aa10.06□□□□□ -0.8
RPAIN-204ENST00000405578 NAGLUP54802 743 aa10.06□□□□□ -0.8
RPAIN-204ENST00000405578 ARF3P61204 181 aaPredicted RBP10.06□□□□□ -0.8
RPAIN-204ENST00000405578 SKP1P63208 163 aa10.06□□□□□ -0.8
RPAIN-204ENST00000405578 REEP5Q00765 189 aa10.06□□□□□ -0.8
RPAIN-204ENST00000405578 CLCQ05315 142 aa10.06□□□□□ -0.8
RPAIN-204ENST00000405578 PCDH1Q08174 1060 aa10.06□□□□□ -0.8
RPAIN-204ENST00000405578 KLRB1Q12918 225 aa10.06□□□□□ -0.8
RPAIN-204ENST00000405578 LCP2Q13094 533 aa10.06□□□□□ -0.8
RPAIN-204ENST00000405578 DOC2AQ14183 400 aa10.06□□□□□ -0.8
RPAIN-204ENST00000405578 NDUFA9Q16795 377 aa10.06□□□□□ -0.8
RPAIN-204ENST00000405578 WASHC2DQ5SRD0 308 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms