RNA–Protein interactions for RNA: ENST00000404583.5

CDPF1-203, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CDPF1, Length 1,439 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-203ENST00000404583 YIPF2Q9BWQ6 316 aa13.85□□□□□ -0.19
CDPF1-203ENST00000404583 FAM117AQ9C073 453 aa13.85□□□□□ -0.19
CDPF1-203ENST00000404583 NT5DC2Q9H857 520 aa13.85□□□□□ -0.19
CDPF1-203ENST00000404583 IPPKQ9H8X2 491 aa13.85□□□□□ -0.19
CDPF1-203ENST00000404583 COPG2Q9UBF2 871 aa13.85□□□□□ -0.19
CDPF1-203ENST00000404583 CTSFQ9UBX1 484 aa13.85□□□□□ -0.19
CDPF1-203ENST00000404583 LGALS13Q9UHV8 139 aa13.85□□□□□ -0.19
CDPF1-203ENST00000404583 EMCNQ9ULC0 261 aa13.85□□□□□ -0.19
CDPF1-203ENST00000404583 PADI2Q9Y2J8 665 aa13.85□□□□□ -0.19
CDPF1-203ENST00000404583 PTRH2Q9Y3E5 179 aaKnown RBP13.85□□□□□ -0.19
CDPF1-203ENST00000404583 FFAR3O14843 346 aa13.84□□□□□ -0.19
CDPF1-203ENST00000404583 GPR42O15529 346 aa13.84□□□□□ -0.19
CDPF1-203ENST00000404583 DLX3O60479 287 aa13.84□□□□□ -0.19
CDPF1-203ENST00000404583 ALBP02768 609 aa13.84□□□□□ -0.19
CDPF1-203ENST00000404583 FBLP22087 321 aaKnown RBP13.84□□□□□ -0.19
CDPF1-203ENST00000404583 CRHR1P34998 444 aa13.84□□□□□ -0.19
CDPF1-203ENST00000404583 HNF4AP41235 474 aa13.84□□□□□ -0.19
CDPF1-203ENST00000404583 CCT5P48643 541 aa13.84□□□□□ -0.19
CDPF1-203ENST00000404583 SLC18A2Q05940 514 aa13.84□□□□□ -0.19
CDPF1-203ENST00000404583 PCDH1Q08174 1060 aa13.84□□□□□ -0.19
CDPF1-203ENST00000404583 LAPTM5Q13571 262 aa13.84□□□□□ -0.19
CDPF1-203ENST00000404583 E2F2Q14209 437 aa13.84□□□□□ -0.19
CDPF1-203ENST00000404583 NKG7Q16617 165 aa13.84□□□□□ -0.19
CDPF1-203ENST00000404583 HIST2H2ACQ16777 129 aaPredicted RBP13.84□□□□□ -0.19
CDPF1-203ENST00000404583 SYT16Q17RD7 645 aa13.84□□□□□ -0.19
CDPF1-203ENST00000404583 CRTC2Q53ET0 693 aaPredicted RBP13.84□□□□□ -0.19
CDPF1-203ENST00000404583 HIST2H2AA3Q6FI13 130 aa13.84□□□□□ -0.19
CDPF1-203ENST00000404583 ADNP2Q6IQ32 1131 aa13.84□□□□□ -0.19
CDPF1-203ENST00000404583 METTL2BQ6P1Q9 378 aaKnown RBP13.84□□□□□ -0.19
CDPF1-203ENST00000404583 VN1R5Q7Z5H4 357 aa13.84□□□□□ -0.19
CDPF1-203ENST00000404583 TRABD2AQ86V40 505 aa13.84□□□□□ -0.19
CDPF1-203ENST00000404583 AMER3Q8N944 861 aa13.84□□□□□ -0.19
CDPF1-203ENST00000404583 TTLQ8NG68 377 aa13.84□□□□□ -0.19
CDPF1-203ENST00000404583 CCT6BQ92526 530 aa13.84□□□□□ -0.19
CDPF1-203ENST00000404583 FKBP10Q96AY3 582 aa13.84□□□□□ -0.19
CDPF1-203ENST00000404583 ZBTB9Q96C00 473 aa13.84□□□□□ -0.19
CDPF1-203ENST00000404583 TMEM109Q9BVC6 243 aa13.84□□□□□ -0.19
CDPF1-203ENST00000404583 PITHD1Q9GZP4 211 aaPredicted RBP13.84□□□□□ -0.19
CDPF1-203ENST00000404583 AICDAQ9GZX7 198 aa13.84□□□□□ -0.19
CDPF1-203ENST00000404583 SLC26A1Q9H2B4 701 aa13.84□□□□□ -0.19
CDPF1-203ENST00000404583 C12orf65Q9H3J6 166 aaKnown RBP13.84□□□□□ -0.19
CDPF1-203ENST00000404583 KLHL31Q9H511 634 aa13.84□□□□□ -0.19
CDPF1-203ENST00000404583 NOL11Q9H8H0 719 aaKnown RBP13.84□□□□□ -0.19
CDPF1-203ENST00000404583 ANKHQ9HCJ1 492 aa13.84□□□□□ -0.19
CDPF1-203ENST00000404583 ACSS2Q9NR19 701 aa13.84□□□□□ -0.19
CDPF1-203ENST00000404583 PCTPQ9UKL6 214 aa13.84□□□□□ -0.19
CDPF1-203ENST00000404583 ANKDD1BA6NHY2 528 aa13.83□□□□□ -0.2
CDPF1-203ENST00000404583 SGK494L7N484 410 aa13.83□□□□□ -0.2
CDPF1-203ENST00000404583 COPEO14579 308 aa13.83□□□□□ -0.2
CDPF1-203ENST00000404583 OR7A17O14581 309 aa13.83□□□□□ -0.2
CDPF1-203ENST00000404583 NSA2O95478 260 aaKnown RBP13.83□□□□□ -0.2
CDPF1-203ENST00000404583 RECKO95980 971 aa13.83□□□□□ -0.2
CDPF1-203ENST00000404583 B3GALT4O96024 378 aa13.83□□□□□ -0.2
CDPF1-203ENST00000404583 SERPINA6P08185 405 aa13.83□□□□□ -0.2
CDPF1-203ENST00000404583 CD63P08962 238 aa13.83□□□□□ -0.2
CDPF1-203ENST00000404583 ZNF888P0CJ79 500 aaPredicted RBP13.83□□□□□ -0.2
CDPF1-203ENST00000404583 AVPR1BP47901 424 aa13.83□□□□□ -0.2
CDPF1-203ENST00000404583 MAT1AQ00266 395 aaKnown RBP13.83□□□□□ -0.2
CDPF1-203ENST00000404583 ZNF844Q08AG5 666 aa13.83□□□□□ -0.2
CDPF1-203ENST00000404583 DSG2Q14126 1118 aa13.83□□□□□ -0.2
CDPF1-203ENST00000404583 UGT8Q16880 541 aa13.83□□□□□ -0.2
CDPF1-203ENST00000404583 DEFB109BQ30KR1 87 aa13.83□□□□□ -0.2
CDPF1-203ENST00000404583 VWA2Q5GFL6 755 aa13.83□□□□□ -0.2
CDPF1-203ENST00000404583 PAGE2BQ5JRK9 111 aa13.83□□□□□ -0.2
CDPF1-203ENST00000404583 TOR1AIP1Q5JTV8 583 aa13.83□□□□□ -0.2
CDPF1-203ENST00000404583 SHISA6Q6ZSJ9 500 aa13.83□□□□□ -0.2
CDPF1-203ENST00000404583 PDSS2Q86YH6 399 aa13.83□□□□□ -0.2
CDPF1-203ENST00000404583 MYLK4Q86YV6 388 aaPredicted RBP13.83□□□□□ -0.2
CDPF1-203ENST00000404583 IQCKQ8N0W5 287 aa13.83□□□□□ -0.2
CDPF1-203ENST00000404583 SHISA5Q8N114 240 aa13.83□□□□□ -0.2
CDPF1-203ENST00000404583 OR2Y1Q8NGV0 311 aa13.83□□□□□ -0.2
CDPF1-203ENST00000404583 STT3BQ8TCJ2 826 aa13.83□□□□□ -0.2
CDPF1-203ENST00000404583 UTP15Q8TED0 518 aaKnown RBP13.83□□□□□ -0.2
CDPF1-203ENST00000404583 EXTL1Q92935 676 aa13.83□□□□□ -0.2
CDPF1-203ENST00000404583 ZIM3Q96PE6 472 aa13.83□□□□□ -0.2
CDPF1-203ENST00000404583 SLC6A16Q9GZN6 736 aa13.83□□□□□ -0.2
CDPF1-203ENST00000404583 SOX17Q9H6I2 414 aaPredicted RBP13.83□□□□□ -0.2
CDPF1-203ENST00000404583 ACTR8Q9H981 624 aa13.83□□□□□ -0.2
CDPF1-203ENST00000404583 ZBTB26Q9HCK0 441 aa13.83□□□□□ -0.2
CDPF1-203ENST00000404583 ZNF282Q9UDV7 671 aaPredicted RBP13.83□□□□□ -0.2
CDPF1-203ENST00000404583 GRID1Q9ULK0 1009 aa13.83□□□□□ -0.2
CDPF1-203ENST00000404583 NAALAD2Q9Y3Q0 740 aa13.83□□□□□ -0.2
CDPF1-203ENST00000404583 SLC22A7Q9Y694 548 aa13.83□□□□□ -0.2
CDPF1-203ENST00000404583 ATMQ13315 3056 aa13.83□□□□□ -0.2
CDPF1-203ENST00000404583 MED13Q9UHV7 2174 aa13.83□□□□□ -0.2
CDPF1-203ENST00000404583 CCDC151A5D8V7 595 aa13.82□□□□□ -0.2
CDPF1-203ENST00000404583 VSTM2BA6NLU5 285 aa13.82□□□□□ -0.2
CDPF1-203ENST00000404583 H0YIG0 161 aa13.82□□□□□ -0.2
CDPF1-203ENST00000404583 PRPF4O43172 522 aaKnown RBP eCLIP13.82□□□□□ -0.2
CDPF1-203ENST00000404583 ERLIN1O75477 346 aa13.82□□□□□ -0.2
CDPF1-203ENST00000404583 CLEC3AO75596 197 aa13.82□□□□□ -0.2
CDPF1-203ENST00000404583 KLHL18O94889 574 aa13.82□□□□□ -0.2
CDPF1-203ENST00000404583 TBX6O95947 436 aaPredicted RBP13.82□□□□□ -0.2
CDPF1-203ENST00000404583 PROCP04070 461 aa13.82□□□□□ -0.2
CDPF1-203ENST00000404583 UMODP07911 640 aa13.82□□□□□ -0.2
CDPF1-203ENST00000404583 RPS17P08708 135 aaKnown RBP13.82□□□□□ -0.2
CDPF1-203ENST00000404583 PCNAP12004 261 aa13.82□□□□□ -0.2
CDPF1-203ENST00000404583 ALOX12P18054 663 aa13.82□□□□□ -0.2
CDPF1-203ENST00000404583 TSPAN8P19075 237 aa13.82□□□□□ -0.2
CDPF1-203ENST00000404583 ATP5F1P24539 256 aaPredicted RBP13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms