RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 SLC15A5A6NIM6 579 aa4.56□□□□□ -1.68
HMGB3P19-201ENST00000403971 DUXAA6NLW8 204 aa4.56□□□□□ -1.68
HMGB3P19-201ENST00000403971 PTGESO14684 152 aa4.56□□□□□ -1.68
HMGB3P19-201ENST00000403971 NEMFO60524 1076 aa4.56□□□□□ -1.68
HMGB3P19-201ENST00000403971 ZNF432O94892 652 aa4.56□□□□□ -1.68
HMGB3P19-201ENST00000403971 ACSL3O95573 720 aa4.56□□□□□ -1.68
HMGB3P19-201ENST00000403971 MBD3O95983 291 aa4.56□□□□□ -1.68
HMGB3P19-201ENST00000403971 TSHBP01222 138 aa4.56□□□□□ -1.68
HMGB3P19-201ENST00000403971 FYNP06241 537 aa4.56□□□□□ -1.68
HMGB3P19-201ENST00000403971 GNAZP19086 355 aa4.56□□□□□ -1.68
HMGB3P19-201ENST00000403971 ZNF41P51814 821 aaPredicted RBP4.56□□□□□ -1.68
HMGB3P19-201ENST00000403971 RBPJQ06330 500 aa4.56□□□□□ -1.68
HMGB3P19-201ENST00000403971 PDIA5Q14554 519 aa4.56□□□□□ -1.68
HMGB3P19-201ENST00000403971 CEP55Q53EZ4 464 aa4.56□□□□□ -1.68
HMGB3P19-201ENST00000403971 TECRLQ5HYJ1 363 aa4.56□□□□□ -1.68
HMGB3P19-201ENST00000403971 WDR38Q5JTN6 314 aa4.56□□□□□ -1.68
HMGB3P19-201ENST00000403971 FAM47EQ6ZV65 393 aa4.56□□□□□ -1.68
HMGB3P19-201ENST00000403971 ARHGAP22Q7Z5H3 698 aa4.56□□□□□ -1.68
HMGB3P19-201ENST00000403971 SLFN11Q7Z7L1 901 aa4.56□□□□□ -1.68
HMGB3P19-201ENST00000403971 CAMKVQ8NCB2 501 aa4.56□□□□□ -1.68
HMGB3P19-201ENST00000403971 KLHDC9Q8NEP7 349 aa4.56□□□□□ -1.68
HMGB3P19-201ENST00000403971 LRRC8CQ8TDW0 803 aa4.56□□□□□ -1.68
HMGB3P19-201ENST00000403971 GRHL3Q8TE85 626 aa4.56□□□□□ -1.68
HMGB3P19-201ENST00000403971 SSMEM1Q8WWF3 244 aa4.56□□□□□ -1.68
HMGB3P19-201ENST00000403971 IRGQQ8WZA9 623 aa4.56□□□□□ -1.68
HMGB3P19-201ENST00000403971 SLC47A1Q96FL8 570 aa4.56□□□□□ -1.68
HMGB3P19-201ENST00000403971 AK8Q96MA6 479 aa4.56□□□□□ -1.68
HMGB3P19-201ENST00000403971 FAM20AQ96MK3 541 aa4.56□□□□□ -1.68
HMGB3P19-201ENST00000403971 INPP4AQ96PE3 977 aaPredicted RBP4.56□□□□□ -1.68
HMGB3P19-201ENST00000403971 MTMR9Q96QG7 549 aa4.56□□□□□ -1.68
HMGB3P19-201ENST00000403971 TAAR1Q96RJ0 339 aa4.56□□□□□ -1.68
HMGB3P19-201ENST00000403971 EPYCQ99645 322 aa4.56□□□□□ -1.68
HMGB3P19-201ENST00000403971 RAB34Q9BZG1 259 aa4.56□□□□□ -1.68
HMGB3P19-201ENST00000403971 PORCNQ9H237 461 aa4.56□□□□□ -1.68
HMGB3P19-201ENST00000403971 ERVMER34-1Q9H9K5 563 aa4.56□□□□□ -1.68
HMGB3P19-201ENST00000403971 KCNMB3Q9NPA1 279 aa4.56□□□□□ -1.68
HMGB3P19-201ENST00000403971 PXMP2Q9NR77 195 aa4.56□□□□□ -1.68
HMGB3P19-201ENST00000403971 SERINC1Q9NRX5 453 aa4.56□□□□□ -1.68
HMGB3P19-201ENST00000403971 LRWD1Q9UFC0 647 aa4.56□□□□□ -1.68
HMGB3P19-201ENST00000403971 SLC7A7Q9UM01 511 aa4.56□□□□□ -1.68
HMGB3P19-201ENST00000403971 NME7Q9Y5B8 376 aa4.56□□□□□ -1.68
HMGB3P19-201ENST00000403971 IGLV3-22A0A075B6J6 115 aa4.55□□□□□ -1.68
HMGB3P19-201ENST00000403971 GOLGA6L4A6NEF3 574 aa4.55□□□□□ -1.68
HMGB3P19-201ENST00000403971 ASB14A6NK59 587 aa4.55□□□□□ -1.68
HMGB3P19-201ENST00000403971 FAM86B1E9PN63 330 aa4.55□□□□□ -1.68
HMGB3P19-201ENST00000403971 PLOD2O00469 737 aa4.55□□□□□ -1.68
HMGB3P19-201ENST00000403971 CIDEAO60543 219 aa4.55□□□□□ -1.68
HMGB3P19-201ENST00000403971 SLC22A3O75751 556 aa4.55□□□□□ -1.68
HMGB3P19-201ENST00000403971 TDP2O95551 362 aa4.55□□□□□ -1.68
HMGB3P19-201ENST00000403971 ATP5BP06576 529 aaKnown RBP4.55□□□□□ -1.68
HMGB3P19-201ENST00000403971 CCDC175P0C221 793 aa4.55□□□□□ -1.68
HMGB3P19-201ENST00000403971 FAM86B2P0C5J1 330 aa4.55□□□□□ -1.68
HMGB3P19-201ENST00000403971 CD22P20273 847 aa4.55□□□□□ -1.68
HMGB3P19-201ENST00000403971 JAK1P23458 1154 aa4.55□□□□□ -1.68
HMGB3P19-201ENST00000403971 CMA1P23946 247 aa4.55□□□□□ -1.68
HMGB3P19-201ENST00000403971 CCND2P30279 289 aa4.55□□□□□ -1.68
HMGB3P19-201ENST00000403971 LONP1P36776 959 aaKnown RBP4.55□□□□□ -1.68
HMGB3P19-201ENST00000403971 NR2C2P49116 596 aa4.55□□□□□ -1.68
HMGB3P19-201ENST00000403971 B3GALT5-AS1P59052 145 aa4.55□□□□□ -1.68
HMGB3P19-201ENST00000403971 POLR2LP62875 67 aaKnown RBP4.55□□□□□ -1.68
HMGB3P19-201ENST00000403971 ZNF415Q09FC8 603 aa4.55□□□□□ -1.68
HMGB3P19-201ENST00000403971 GRB14Q14449 540 aa4.55□□□□□ -1.68
HMGB3P19-201ENST00000403971 KLHL40Q2TBA0 621 aa4.55□□□□□ -1.68
HMGB3P19-201ENST00000403971 SYT14P1Q58G82 188 aa4.55□□□□□ -1.68
HMGB3P19-201ENST00000403971 DCAF10Q5QP82 559 aa4.55□□□□□ -1.68
HMGB3P19-201ENST00000403971 ARHGEF16Q5VV41 709 aa4.55□□□□□ -1.68
HMGB3P19-201ENST00000403971 RESP18Q5W5W9 173 aa4.55□□□□□ -1.68
HMGB3P19-201ENST00000403971 PLA2G4FQ68DD2 849 aa4.55□□□□□ -1.68
HMGB3P19-201ENST00000403971 MFSD12Q6NUT3 480 aa4.55□□□□□ -1.68
HMGB3P19-201ENST00000403971 SUSD1Q6UWL2 747 aa4.55□□□□□ -1.68
HMGB3P19-201ENST00000403971 MARK2Q7KZI7 788 aaKnown RBP4.55□□□□□ -1.68
HMGB3P19-201ENST00000403971 NUP54Q7Z3B4 507 aa4.55□□□□□ -1.68
HMGB3P19-201ENST00000403971 GPR142Q7Z601 462 aa4.55□□□□□ -1.68
HMGB3P19-201ENST00000403971 TMEM139Q8IV31 216 aa4.55□□□□□ -1.68
HMGB3P19-201ENST00000403971 TTC30BQ8N4P2 665 aa4.55□□□□□ -1.68
HMGB3P19-201ENST00000403971 ANKRD13CQ8N6S4 541 aa4.55□□□□□ -1.68
HMGB3P19-201ENST00000403971 LMNTD1Q8N9Z9 388 aa4.55□□□□□ -1.68
HMGB3P19-201ENST00000403971 NPEPL1Q8NDH3 523 aa4.55□□□□□ -1.68
HMGB3P19-201ENST00000403971 OR1J1Q8NGS3 322 aa4.55□□□□□ -1.68
HMGB3P19-201ENST00000403971 KIF18AQ8NI77 898 aa4.55□□□□□ -1.68
HMGB3P19-201ENST00000403971 OTUB1Q96FW1 271 aaPredicted RBP4.55□□□□□ -1.68
HMGB3P19-201ENST00000403971 CDHR1Q96JP9 859 aa4.55□□□□□ -1.68
HMGB3P19-201ENST00000403971 MUS81Q96NY9 551 aa4.55□□□□□ -1.68
HMGB3P19-201ENST00000403971 RIT2Q99578 217 aa4.55□□□□□ -1.68
HMGB3P19-201ENST00000403971 CPNE1Q99829 537 aa4.55□□□□□ -1.68
HMGB3P19-201ENST00000403971 ZNF334Q9HCZ1 680 aaPredicted RBP4.55□□□□□ -1.68
HMGB3P19-201ENST00000403971 FAM118AQ9NWS6 357 aa4.55□□□□□ -1.68
HMGB3P19-201ENST00000403971 WWOXQ9NZC7 414 aa4.55□□□□□ -1.68
HMGB3P19-201ENST00000403971 DAPK2Q9UIK4 370 aa4.55□□□□□ -1.68
HMGB3P19-201ENST00000403971 ACAD8Q9UKU7 415 aa4.55□□□□□ -1.68
HMGB3P19-201ENST00000403971 UBIAD1Q9Y5Z9 338 aa4.55□□□□□ -1.68
HMGB3P19-201ENST00000403971 PCNTO95613 3336 aa4.54□□□□□ -1.68
HMGB3P19-201ENST00000403971 NFASCO94856 1347 aa4.54□□□□□ -1.68
HMGB3P19-201ENST00000403971 FRMPD3Q5JV73 1810 aa4.54□□□□□ -1.68
HMGB3P19-201ENST00000403971 EME2A4GXA9 379 aaPredicted RBP4.54□□□□□ -1.68
HMGB3P19-201ENST00000403971 FAM172BPA6NC97 362 aa4.54□□□□□ -1.68
HMGB3P19-201ENST00000403971 NEMP2A6NFY4 417 aa4.54□□□□□ -1.68
HMGB3P19-201ENST00000403971 DNM1LO00429 736 aa4.54□□□□□ -1.68
HMGB3P19-201ENST00000403971 SLC22A2O15244 555 aa4.54□□□□□ -1.68
HMGB3P19-201ENST00000403971 SLC37A4O43826 429 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms