RNA–Protein interactions for RNA: ENST00000399976.6

USP16-204, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP16, Length 2,963 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-204ENST00000399976 GPRIN3Q6ZVF9 776 aa7.16□□□□□ -1.26
USP16-204ENST00000399976 CHSY3Q70JA7 882 aa7.16□□□□□ -1.26
USP16-204ENST00000399976 TMPRSS11BQ86T26 416 aa7.16□□□□□ -1.26
USP16-204ENST00000399976 TMEM126BQ8IUX1 230 aa7.16□□□□□ -1.26
USP16-204ENST00000399976 TEX9Q8N6V9 391 aa7.16□□□□□ -1.26
USP16-204ENST00000399976 SNX31Q8N9S9 440 aa7.16□□□□□ -1.26
USP16-204ENST00000399976 ANKRD53Q8N9V6 530 aa7.16□□□□□ -1.26
USP16-204ENST00000399976 PPFIBP2Q8ND30 876 aa7.16□□□□□ -1.26
USP16-204ENST00000399976 OR7G3Q8NG95 312 aa7.16□□□□□ -1.26
USP16-204ENST00000399976 TCP10LQ8TDR4 215 aa7.16□□□□□ -1.26
USP16-204ENST00000399976 C11orf24Q96F05 449 aaPredicted RBP7.16□□□□□ -1.26
USP16-204ENST00000399976 KCNC2Q96PR1 638 aa7.16□□□□□ -1.26
USP16-204ENST00000399976 CENPKQ9BS16 269 aa7.16□□□□□ -1.26
USP16-204ENST00000399976 CCDC134Q9H6E4 229 aa7.16□□□□□ -1.26
USP16-204ENST00000399976 DDX31Q9H8H2 851 aaKnown RBP7.16□□□□□ -1.26
USP16-204ENST00000399976 ZBTB26Q9HCK0 441 aa7.16□□□□□ -1.26
USP16-204ENST00000399976 DMRT3Q9NQL9 472 aa7.16□□□□□ -1.26
USP16-204ENST00000399976 SEMA3GQ9NS98 782 aa7.16□□□□□ -1.26
USP16-204ENST00000399976 AHSPQ9NZD4 102 aa7.16□□□□□ -1.26
USP16-204ENST00000399976 TBK1Q9UHD2 729 aa7.16□□□□□ -1.26
USP16-204ENST00000399976 PADI1Q9ULC6 663 aa7.16□□□□□ -1.26
USP16-204ENST00000399976 TMED5Q9Y3A6 229 aa7.16□□□□□ -1.26
USP16-204ENST00000399976 MAP4K5Q9Y4K4 846 aa7.16□□□□□ -1.26
USP16-204ENST00000399976 PCDHGB7Q9Y5F8 929 aa7.16□□□□□ -1.26
USP16-204ENST00000399976 LOC102723996A0A087X1L8 192 aa7.16□□□□□ -1.26
USP16-204ENST00000399976 C9J4A7 227 aa7.16□□□□□ -1.26
USP16-204ENST00000399976 H7BY64 318 aa7.16□□□□□ -1.26
USP16-204ENST00000399976 RRP8O43159 456 aaKnown RBP7.16□□□□□ -1.26
USP16-204ENST00000399976 PRAMEF4O60810 478 aa7.16□□□□□ -1.26
USP16-204ENST00000399976 CD22P20273 847 aa7.16□□□□□ -1.26
USP16-204ENST00000399976 SLCO1A2P46721 670 aa7.16□□□□□ -1.26
USP16-204ENST00000399976 PRAMEF9Q5VWM5 478 aa7.16□□□□□ -1.26
USP16-204ENST00000399976 FRG2Q64ET8 278 aa7.16□□□□□ -1.26
USP16-204ENST00000399976 VN1R5Q7Z5H4 357 aa7.16□□□□□ -1.26
USP16-204ENST00000399976 TRIM73Q86UV7 250 aa7.16□□□□□ -1.26
USP16-204ENST00000399976 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP7.16□□□□□ -1.26
USP16-204ENST00000399976 ARFGAP2Q8N6H7 521 aa7.16□□□□□ -1.26
USP16-204ENST00000399976 PLPP5Q8NEB5 264 aa7.16□□□□□ -1.26
USP16-204ENST00000399976 KCNE4Q8WWG9 221 aa7.16□□□□□ -1.26
USP16-204ENST00000399976 JPH3Q8WXH2 748 aaPredicted RBP7.16□□□□□ -1.26
USP16-204ENST00000399976 THAP4Q8WY91 577 aa7.16□□□□□ -1.26
USP16-204ENST00000399976 KIAA1143Q96AT1 154 aaPredicted RBP7.16□□□□□ -1.26
USP16-204ENST00000399976 MS4A6EQ96DS6 147 aa7.16□□□□□ -1.26
USP16-204ENST00000399976 PRAP1Q96NZ9 151 aa7.16□□□□□ -1.26
USP16-204ENST00000399976 FRG2BQ96QU4 278 aa7.16□□□□□ -1.26
USP16-204ENST00000399976 ULBP3Q9BZM4 244 aa7.16□□□□□ -1.26
USP16-204ENST00000399976 ZNF358Q9NW07 568 aa7.16□□□□□ -1.26
USP16-204ENST00000399976 FOXJ2Q9P0K8 574 aa7.16□□□□□ -1.26
USP16-204ENST00000399976 TUBD1Q9UJT1 453 aa7.16□□□□□ -1.26
USP16-204ENST00000399976 PPIEQ9UNP9 301 aaKnown RBP7.16□□□□□ -1.26
USP16-204ENST00000399976 RUVBL1Q9Y265 456 aaKnown RBP7.16□□□□□ -1.26
USP16-204ENST00000399976 EP300Q09472 2414 aaPredicted RBP7.16□□□□□ -1.26
USP16-204ENST00000399976 RIF1Q5UIP0 2472 aaKnown RBP7.15□□□□□ -1.26
USP16-204ENST00000399976 ANKDD1BA6NHY2 528 aa7.15□□□□□ -1.26
USP16-204ENST00000399976 ZNF891A8MT65 544 aaPredicted RBP7.15□□□□□ -1.26
USP16-204ENST00000399976 SNNO75324 88 aaPredicted RBP7.15□□□□□ -1.26
USP16-204ENST00000399976 VPS4BO75351 444 aa7.15□□□□□ -1.26
USP16-204ENST00000399976 RSL1D1O76021 490 aaKnown RBP7.15□□□□□ -1.26
USP16-204ENST00000399976 SLITRK5O94991 958 aa7.15□□□□□ -1.26
USP16-204ENST00000399976 ITGAXP20702 1163 aa7.15□□□□□ -1.26
USP16-204ENST00000399976 PPP2R1BP30154 601 aa7.15□□□□□ -1.26
USP16-204ENST00000399976 ALDH3A1P30838 453 aa7.15□□□□□ -1.26
USP16-204ENST00000399976 GLRBP48167 497 aa7.15□□□□□ -1.26
USP16-204ENST00000399976 SERPINB4P48594 390 aa7.15□□□□□ -1.26
USP16-204ENST00000399976 PSPHP78330 225 aa7.15□□□□□ -1.26
USP16-204ENST00000399976 IGLV3-21P80748 117 aaPredicted RBP7.15□□□□□ -1.26
USP16-204ENST00000399976 GPS2Q13227 327 aa7.15□□□□□ -1.26
USP16-204ENST00000399976 SPIN4Q56A73 249 aa7.15□□□□□ -1.26
USP16-204ENST00000399976 DEPDC1Q5TB30 811 aa7.15□□□□□ -1.26
USP16-204ENST00000399976 KHDRBS2Q5VWX1 349 aaKnown RBP7.15□□□□□ -1.26
USP16-204ENST00000399976 QSOX2Q6ZRP7 698 aa7.15□□□□□ -1.26
USP16-204ENST00000399976 COX15Q7KZN9 410 aa7.15□□□□□ -1.26
USP16-204ENST00000399976 RCBTB1Q8NDN9 531 aa7.15□□□□□ -1.26
USP16-204ENST00000399976 ADAMTS17Q8TE56 1095 aa7.15□□□□□ -1.26
USP16-204ENST00000399976 UTP15Q8TED0 518 aaKnown RBP7.15□□□□□ -1.26
USP16-204ENST00000399976 SLC13A3Q8WWT9 602 aa7.15□□□□□ -1.26
USP16-204ENST00000399976 N4BP2L2Q92802 583 aaPredicted RBP7.15□□□□□ -1.26
USP16-204ENST00000399976 PELOQ9BRX2 385 aaKnown RBP7.15□□□□□ -1.26
USP16-204ENST00000399976 SYNDIG1Q9H7V2 258 aa7.15□□□□□ -1.26
USP16-204ENST00000399976 TXLNGQ9NUQ3 528 aa7.15□□□□□ -1.26
USP16-204ENST00000399976 MRGBPQ9NV56 204 aa7.15□□□□□ -1.26
USP16-204ENST00000399976 PHF11Q9UIL8 331 aa7.15□□□□□ -1.26
USP16-204ENST00000399976 TLDC2A0PJX2 215 aa7.15□□□□□ -1.27
USP16-204ENST00000399976 MEN1O00255 615 aa7.15□□□□□ -1.27
USP16-204ENST00000399976 SLC28A1O00337 649 aa7.15□□□□□ -1.27
USP16-204ENST00000399976 GUCY1B2O75343 617 aa7.15□□□□□ -1.27
USP16-204ENST00000399976 TBX6O95947 436 aaPredicted RBP7.15□□□□□ -1.27
USP16-204ENST00000399976 PVRP15151 417 aa7.15□□□□□ -1.27
USP16-204ENST00000399976 DDX5P17844 614 aaKnown RBP7.15□□□□□ -1.27
USP16-204ENST00000399976 ALOX12P18054 663 aa7.15□□□□□ -1.27
USP16-204ENST00000399976 SEPHS1P49903 392 aa7.15□□□□□ -1.27
USP16-204ENST00000399976 AGTR2P50052 363 aa7.15□□□□□ -1.27
USP16-204ENST00000399976 TMPRSS3P57727 454 aa7.15□□□□□ -1.27
USP16-204ENST00000399976 SH3BP2P78314 561 aa7.15□□□□□ -1.27
USP16-204ENST00000399976 NCF4Q15080 339 aa7.15□□□□□ -1.27
USP16-204ENST00000399976 CATSPEREQ5SY80 951 aa7.15□□□□□ -1.27
USP16-204ENST00000399976 ATG16L1Q676U5 607 aa7.15□□□□□ -1.27
USP16-204ENST00000399976 MRM1Q6IN84 353 aaKnown RBP7.15□□□□□ -1.27
USP16-204ENST00000399976 FRMPD2BQ6IN97 320 aa7.15□□□□□ -1.27
USP16-204ENST00000399976 IKBIPQ70UQ0 350 aa7.15□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms