RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 CDKN2AIPNLQ96HQ2 116 aa13.8□□□□□ -0.2
PCDHA11-201ENST00000398640 PKP4Q99569 1192 aa13.8□□□□□ -0.2
PCDHA11-201ENST00000398640 PCDHAC1Q9H158 963 aa13.8□□□□□ -0.2
PCDHA11-201ENST00000398640 P2RX2Q9UBL9 471 aa13.8□□□□□ -0.2
PCDHA11-201ENST00000398640 HCFC2Q9Y5Z7 792 aa13.8□□□□□ -0.2
PCDHA11-201ENST00000398640 LILRB3O75022 631 aa13.8□□□□□ -0.2
PCDHA11-201ENST00000398640 SYNGR4O95473 234 aa13.8□□□□□ -0.2
PCDHA11-201ENST00000398640 ZNF3P17036 446 aa13.8□□□□□ -0.2
PCDHA11-201ENST00000398640 DPP6P42658 865 aa13.8□□□□□ -0.2
PCDHA11-201ENST00000398640 GDF5P43026 501 aa13.8□□□□□ -0.2
PCDHA11-201ENST00000398640 DECR1Q16698 335 aa13.8□□□□□ -0.2
PCDHA11-201ENST00000398640 TXNRD3NBQ6F5E7 133 aa13.8□□□□□ -0.2
PCDHA11-201ENST00000398640 PRR11Q96HE9 360 aaPredicted RBP13.8□□□□□ -0.2
PCDHA11-201ENST00000398640 ADAD1Q96M93 576 aaKnown RBP13.8□□□□□ -0.2
PCDHA11-201ENST00000398640 ZNF347Q96SE7 839 aa13.8□□□□□ -0.2
PCDHA11-201ENST00000398640 SLC39A3Q9BRY0 314 aa13.8□□□□□ -0.2
PCDHA11-201ENST00000398640 FAM234BA2RU67 622 aa13.8□□□□□ -0.2
PCDHA11-201ENST00000398640 DUXAA6NLW8 204 aa13.8□□□□□ -0.2
PCDHA11-201ENST00000398640 MID1O15344 667 aa13.8□□□□□ -0.2
PCDHA11-201ENST00000398640 TSPAN6O43657 245 aa13.8□□□□□ -0.2
PCDHA11-201ENST00000398640 OR7A10O76100 309 aa13.8□□□□□ -0.2
PCDHA11-201ENST00000398640 AQP4P55087 323 aa13.8□□□□□ -0.2
PCDHA11-201ENST00000398640 AP3S2P59780 193 aa13.8□□□□□ -0.2
PCDHA11-201ENST00000398640 CMTM7Q96FZ5 175 aa13.8□□□□□ -0.2
PCDHA11-201ENST00000398640 ZNF717Q9BY31 904 aaPredicted RBP13.8□□□□□ -0.2
PCDHA11-201ENST00000398640 AMBNQ9NP70 447 aa13.8□□□□□ -0.2
PCDHA11-201ENST00000398640 RAB26Q9ULW5 256 aa13.8□□□□□ -0.2
PCDHA11-201ENST00000398640 TMEM233B4DJY2 109 aa13.8□□□□□ -0.2
PCDHA11-201ENST00000398640 GSRP00390 522 aa13.8□□□□□ -0.2
PCDHA11-201ENST00000398640 OTX2P32243 289 aa13.8□□□□□ -0.2
PCDHA11-201ENST00000398640 STK19P49842 368 aaPredicted RBP13.8□□□□□ -0.2
PCDHA11-201ENST00000398640 SEMA3AQ14563 771 aa13.8□□□□□ -0.2
PCDHA11-201ENST00000398640 TMEM198Q66K66 360 aa13.8□□□□□ -0.2
PCDHA11-201ENST00000398640 SLC9A4Q6AI14 798 aa13.8□□□□□ -0.2
PCDHA11-201ENST00000398640 RAB43Q86YS6 212 aa13.8□□□□□ -0.2
PCDHA11-201ENST00000398640 DNAJA4Q8WW22 397 aaPredicted RBP13.8□□□□□ -0.2
PCDHA11-201ENST00000398640 FGF13Q92913 245 aa13.8□□□□□ -0.2
PCDHA11-201ENST00000398640 PDE10AQ9Y233 779 aa13.8□□□□□ -0.2
PCDHA11-201ENST00000398640 TOR1BO14657 336 aa13.79□□□□□ -0.2
PCDHA11-201ENST00000398640 COQ9O75208 318 aa13.79□□□□□ -0.2
PCDHA11-201ENST00000398640 TMEM63AO94886 807 aa13.79□□□□□ -0.2
PCDHA11-201ENST00000398640 PGLSO95336 258 aa13.79□□□□□ -0.2
PCDHA11-201ENST00000398640 CPNE6O95741 557 aa13.79□□□□□ -0.2
PCDHA11-201ENST00000398640 PRH1P02810 166 aa13.79□□□□□ -0.2
PCDHA11-201ENST00000398640 OR3A3P47888 321 aa13.79□□□□□ -0.2
PCDHA11-201ENST00000398640 OR3A2P47893 321 aa13.79□□□□□ -0.2
PCDHA11-201ENST00000398640 OR12D2P58182 307 aa13.79□□□□□ -0.2
PCDHA11-201ENST00000398640 C1orf189Q5VU69 101 aa13.79□□□□□ -0.2
PCDHA11-201ENST00000398640 COQ10BQ9H8M1 238 aa13.79□□□□□ -0.2
PCDHA11-201ENST00000398640 MAST2Q6P0Q8 1798 aa13.79□□□□□ -0.2
PCDHA11-201ENST00000398640 OR6C74A6NCV1 312 aa13.79□□□□□ -0.2
PCDHA11-201ENST00000398640 CXorf49A8MYA2 514 aaPredicted RBP13.79□□□□□ -0.2
PCDHA11-201ENST00000398640 TRMUO75648 421 aaKnown RBP13.79□□□□□ -0.2
PCDHA11-201ENST00000398640 CCNKO75909 580 aa13.79□□□□□ -0.2
PCDHA11-201ENST00000398640 STC2O76061 302 aa13.79□□□□□ -0.2
PCDHA11-201ENST00000398640 CH25HO95992 272 aa13.79□□□□□ -0.2
PCDHA11-201ENST00000398640 EDNRAP25101 427 aa13.79□□□□□ -0.2
PCDHA11-201ENST00000398640 ACSL1P33121 698 aa13.79□□□□□ -0.2
PCDHA11-201ENST00000398640 NLGN4XQ8N0W4 816 aa13.79□□□□□ -0.2
PCDHA11-201ENST00000398640 OR10G2Q8NGC3 310 aa13.79□□□□□ -0.2
PCDHA11-201ENST00000398640 LGALS13Q9UHV8 139 aa13.79□□□□□ -0.2
PCDHA11-201ENST00000398640 A0A0D9SEW6 157 aa13.79□□□□□ -0.2
PCDHA11-201ENST00000398640 HADHBP55084 474 aaKnown RBP13.79□□□□□ -0.2
PCDHA11-201ENST00000398640 EMC10Q5UCC4 262 aa13.79□□□□□ -0.2
PCDHA11-201ENST00000398640 GPAT4Q86UL3 456 aa13.79□□□□□ -0.2
PCDHA11-201ENST00000398640 GLB1L3Q8NCI6 653 aaPredicted RBP13.79□□□□□ -0.2
PCDHA11-201ENST00000398640 OR6N1Q8NGY5 312 aa13.79□□□□□ -0.2
PCDHA11-201ENST00000398640 C1orf74Q96LT6 269 aa13.79□□□□□ -0.2
PCDHA11-201ENST00000398640 KCTD3Q9Y597 815 aa13.79□□□□□ -0.2
PCDHA11-201ENST00000398640 PRAMEF33A0A0G2JMD5 474 aa13.79□□□□□ -0.2
PCDHA11-201ENST00000398640 TMEM189-UBE2V1I3L0A0 370 aa13.79□□□□□ -0.2
PCDHA11-201ENST00000398640 PRAMEF10O60809 474 aa13.79□□□□□ -0.2
PCDHA11-201ENST00000398640 FCER2P06734 321 aa13.79□□□□□ -0.2
PCDHA11-201ENST00000398640 ARFRP1Q13795 201 aa13.79□□□□□ -0.2
PCDHA11-201ENST00000398640 DCAF12L1Q5VU92 463 aa13.79□□□□□ -0.2
PCDHA11-201ENST00000398640 CLDN19Q8N6F1 224 aa13.79□□□□□ -0.2
PCDHA11-201ENST00000398640 NFKBIDQ8NI38 313 aa13.79□□□□□ -0.2
PCDHA11-201ENST00000398640 BORCS5Q969J3 196 aa13.79□□□□□ -0.2
PCDHA11-201ENST00000398640 LRIG1Q96JA1 1093 aa13.79□□□□□ -0.2
PCDHA11-201ENST00000398640 HHIPQ96QV1 700 aa13.79□□□□□ -0.2
PCDHA11-201ENST00000398640 Q9N2J8 555 aa13.79□□□□□ -0.2
PCDHA11-201ENST00000398640 ITM2CQ9NQX7 267 aa13.79□□□□□ -0.2
PCDHA11-201ENST00000398640 SPATA7Q9P0W8 599 aa13.79□□□□□ -0.2
PCDHA11-201ENST00000398640 CFL2Q9Y281 166 aa13.79□□□□□ -0.2
PCDHA11-201ENST00000398640 SEMA4FO95754 770 aa13.78□□□□□ -0.2
PCDHA11-201ENST00000398640 IMPDH1P20839 514 aa13.78□□□□□ -0.2
PCDHA11-201ENST00000398640 PRDX6P30041 224 aa13.78□□□□□ -0.2
PCDHA11-201ENST00000398640 GGT5P36269 586 aa13.78□□□□□ -0.2
PCDHA11-201ENST00000398640 AP2S1P53680 142 aaPredicted RBP13.78□□□□□ -0.2
PCDHA11-201ENST00000398640 TAS1R1Q7RTX1 841 aa13.78□□□□□ -0.2
PCDHA11-201ENST00000398640 VN1R2Q8NFZ6 395 aa13.78□□□□□ -0.2
PCDHA11-201ENST00000398640 CITED4Q96RK1 184 aa13.78□□□□□ -0.2
PCDHA11-201ENST00000398640 GLOD5A6NK44 160 aa13.78□□□□□ -0.2
PCDHA11-201ENST00000398640 CNTN5O94779 1100 aa13.78□□□□□ -0.2
PCDHA11-201ENST00000398640 ASGR2P07307 311 aa13.78□□□□□ -0.2
PCDHA11-201ENST00000398640 DGKQP52824 942 aa13.78□□□□□ -0.2
PCDHA11-201ENST00000398640 GBX2P52951 348 aaPredicted RBP13.78□□□□□ -0.2
PCDHA11-201ENST00000398640 ERVK-8P63133 956 aa13.78□□□□□ -0.2
PCDHA11-201ENST00000398640 MEF2AQ02078 507 aaPredicted RBP13.78□□□□□ -0.2
PCDHA11-201ENST00000398640 KLHL26Q53HC5 615 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms