RNA–Protein interactions for RNA: ENST00000398179.3

CCBE1-201, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 5 BASIC

Gene CCBE1, Length 5,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-201ENST00000398179 MAN2A2P49641 1150 aa12.45□□□□□ -0.42
CCBE1-201ENST00000398179 SNRPD2P62316 118 aaKnown RBP12.45□□□□□ -0.42
CCBE1-201ENST00000398179 ZNF844Q08AG5 666 aa12.45□□□□□ -0.42
CCBE1-201ENST00000398179 PTPRRQ15256 657 aa12.45□□□□□ -0.42
CCBE1-201ENST00000398179 TMEM95Q3KNT9 176 aa12.45□□□□□ -0.42
CCBE1-201ENST00000398179 NDNFQ8TB73 568 aa12.45□□□□□ -0.42
CCBE1-201ENST00000398179 HASPINQ8TF76 798 aa12.45□□□□□ -0.42
CCBE1-201ENST00000398179 NUDT11Q96G61 164 aa12.45□□□□□ -0.42
CCBE1-201ENST00000398179 CCDC17Q96LX7 622 aa12.45□□□□□ -0.42
CCBE1-201ENST00000398179 OPALINQ96PE5 141 aa12.45□□□□□ -0.42
CCBE1-201ENST00000398179 OPN4Q9UHM6 478 aa12.45□□□□□ -0.42
CCBE1-201ENST00000398179 SLC39A10Q9ULF5 831 aa12.45□□□□□ -0.42
CCBE1-201ENST00000398179 PCDHB7Q9Y5E2 793 aa12.45□□□□□ -0.42
CCBE1-201ENST00000398179 TMEM218A2RU14 115 aa12.45□□□□□ -0.42
CCBE1-201ENST00000398179 DBX1A6NMT0 343 aa12.45□□□□□ -0.42
CCBE1-201ENST00000398179 NSA2O95478 260 aaKnown RBP12.45□□□□□ -0.42
CCBE1-201ENST00000398179 ZNF8P17098 575 aaPredicted RBP12.45□□□□□ -0.42
CCBE1-201ENST00000398179 BMP7P18075 431 aa12.45□□□□□ -0.42
CCBE1-201ENST00000398179 KDELR1P24390 212 aa12.45□□□□□ -0.42
CCBE1-201ENST00000398179 PTAFRP25105 342 aa12.45□□□□□ -0.42
CCBE1-201ENST00000398179 FOXN2P32314 431 aa12.45□□□□□ -0.42
CCBE1-201ENST00000398179 CNTN1Q12860 1018 aa12.45□□□□□ -0.42
CCBE1-201ENST00000398179 MTAPQ13126 283 aa12.45□□□□□ -0.42
CCBE1-201ENST00000398179 ALKBH1Q13686 389 aaKnown RBP12.45□□□□□ -0.42
CCBE1-201ENST00000398179 PGM5Q15124 567 aa12.45□□□□□ -0.42
CCBE1-201ENST00000398179 MPPE1Q53F39 396 aa12.45□□□□□ -0.42
CCBE1-201ENST00000398179 ABI1Q8IZP0 508 aa12.45□□□□□ -0.42
CCBE1-201ENST00000398179 PPP1R16AQ96I34 528 aa12.45□□□□□ -0.42
CCBE1-201ENST00000398179 MARK4Q96L34 752 aa12.45□□□□□ -0.42
CCBE1-201ENST00000398179 AP5M1Q9H0R1 490 aa12.45□□□□□ -0.42
CCBE1-201ENST00000398179 ZNF696Q9H7X3 374 aa12.45□□□□□ -0.42
CCBE1-201ENST00000398179 BTG4Q9NY30 223 aa12.45□□□□□ -0.42
CCBE1-201ENST00000398179 SLC27A6Q9Y2P4 619 aa12.45□□□□□ -0.42
CCBE1-201ENST00000398179 STARD10Q9Y365 291 aa12.45□□□□□ -0.42
CCBE1-201ENST00000398179 DNMT3AQ9Y6K1 912 aaPredicted RBP12.45□□□□□ -0.42
CCBE1-201ENST00000398179 CDK2AP1O14519 115 aa12.45□□□□□ -0.42
CCBE1-201ENST00000398179 SEC14L5O43304 696 aa12.45□□□□□ -0.42
CCBE1-201ENST00000398179 ADH1BP00325 375 aa12.45□□□□□ -0.42
CCBE1-201ENST00000398179 CRYABP02511 175 aaKnown RBP12.45□□□□□ -0.42
CCBE1-201ENST00000398179 OR4E1P0C645 316 aa12.45□□□□□ -0.42
CCBE1-201ENST00000398179 FDX1P10109 184 aa12.45□□□□□ -0.42
CCBE1-201ENST00000398179 ETS1P14921 441 aa12.45□□□□□ -0.42
CCBE1-201ENST00000398179 CTPS1P17812 591 aa12.45□□□□□ -0.42
CCBE1-201ENST00000398179 MLLT3P42568 568 aaPredicted RBP12.45□□□□□ -0.42
CCBE1-201ENST00000398179 TAF6P49848 677 aa12.45□□□□□ -0.42
CCBE1-201ENST00000398179 OR10A6Q8NH74 314 aa12.45□□□□□ -0.42
CCBE1-201ENST00000398179 RPF2Q9H7B2 306 aaKnown RBP12.45□□□□□ -0.42
CCBE1-201ENST00000398179 FN3KRPQ9HA64 309 aa12.45□□□□□ -0.42
CCBE1-201ENST00000398179 APEX2Q9UBZ4 518 aa12.45□□□□□ -0.42
CCBE1-201ENST00000398179 SRPK3Q9UPE1 567 aa12.45□□□□□ -0.42
CCBE1-201ENST00000398179 KDM5AP29375 1690 aaKnown RBP12.45□□□□□ -0.42
CCBE1-201ENST00000398179 SHROOM2Q13796 1616 aa12.45□□□□□ -0.42
CCBE1-201ENST00000398179 PRAMEF22A3QJZ6 481 aa12.44□□□□□ -0.42
CCBE1-201ENST00000398179 FAM155AB1AL88 458 aaPredicted RBP12.44□□□□□ -0.42
CCBE1-201ENST00000398179 H0YIN7 160 aa12.44□□□□□ -0.42
CCBE1-201ENST00000398179 PDXKO00764 312 aa12.44□□□□□ -0.42
CCBE1-201ENST00000398179 HNRNPA2B1P22626 353 aaKnown RBP12.44□□□□□ -0.42
CCBE1-201ENST00000398179 CYP2F1P24903 491 aa12.44□□□□□ -0.42
CCBE1-201ENST00000398179 GDPD4Q6W3E5 623 aa12.44□□□□□ -0.42
CCBE1-201ENST00000398179 GK5Q6ZS86 529 aa12.44□□□□□ -0.42
CCBE1-201ENST00000398179 USP30Q70CQ3 517 aa12.44□□□□□ -0.42
CCBE1-201ENST00000398179 RASGRP3Q8IV61 690 aa12.44□□□□□ -0.42
CCBE1-201ENST00000398179 KATNAL2Q8IYT4 538 aa12.44□□□□□ -0.42
CCBE1-201ENST00000398179 VWA5B2Q8N398 1253 aa12.44□□□□□ -0.42
CCBE1-201ENST00000398179 OR5B17Q8NGF7 314 aa12.44□□□□□ -0.42
CCBE1-201ENST00000398179 ZNF606Q8WXB4 792 aa12.44□□□□□ -0.42
CCBE1-201ENST00000398179 TTC9Q92623 222 aa12.44□□□□□ -0.42
CCBE1-201ENST00000398179 LENG8Q96PV6 779 aaPredicted RBP12.44□□□□□ -0.42
CCBE1-201ENST00000398179 ARL6Q9H0F7 186 aa12.44□□□□□ -0.42
CCBE1-201ENST00000398179 SNX10Q9Y5X0 201 aa12.44□□□□□ -0.42
CCBE1-201ENST00000398179 hCG_2039718K7EN88 272 aa12.44□□□□□ -0.42
CCBE1-201ENST00000398179 TLR4O00206 839 aa12.44□□□□□ -0.42
CCBE1-201ENST00000398179 DNPH1O43598 174 aa12.44□□□□□ -0.42
CCBE1-201ENST00000398179 HOXD8P13378 290 aaPredicted RBP12.44□□□□□ -0.42
CCBE1-201ENST00000398179 AZGP1P25311 298 aaKnown RBP12.44□□□□□ -0.42
CCBE1-201ENST00000398179 RAC1P63000 192 aa12.44□□□□□ -0.42
CCBE1-201ENST00000398179 SUMO1P63165 101 aaKnown RBP12.44□□□□□ -0.42
CCBE1-201ENST00000398179 ADARB1P78563 741 aaKnown RBP12.44□□□□□ -0.42
CCBE1-201ENST00000398179 TMPRSS9Q7Z410 1059 aa12.44□□□□□ -0.42
CCBE1-201ENST00000398179 LRIG1Q96JA1 1093 aa12.44□□□□□ -0.42
CCBE1-201ENST00000398179 C1orf109Q9NX04 203 aa12.44□□□□□ -0.42
CCBE1-201ENST00000398179 SLC7A8Q9UHI5 535 aa12.44□□□□□ -0.42
CCBE1-201ENST00000398179 KIF25Q9UIL4 384 aa12.44□□□□□ -0.42
CCBE1-201ENST00000398179 DUSP10Q9Y6W6 482 aa12.44□□□□□ -0.42
CCBE1-201ENST00000398179 USP17L13C9JLJ4 530 aa12.44□□□□□ -0.42
CCBE1-201ENST00000398179 SLC31A1O15431 190 aa12.44□□□□□ -0.42
CCBE1-201ENST00000398179 SLC22A5O76082 557 aa12.44□□□□□ -0.42
CCBE1-201ENST00000398179 ZNF41P51814 821 aaPredicted RBP12.44□□□□□ -0.42
CCBE1-201ENST00000398179 PRKAA1Q13131 559 aa12.44□□□□□ -0.42
CCBE1-201ENST00000398179 PDK4Q16654 411 aa12.44□□□□□ -0.42
CCBE1-201ENST00000398179 USP17L6PQ6QN14 398 aa12.44□□□□□ -0.42
CCBE1-201ENST00000398179 VSTM1Q6UX27 236 aa12.44□□□□□ -0.42
CCBE1-201ENST00000398179 FRRS1Q6ZNA5 592 aa12.44□□□□□ -0.42
CCBE1-201ENST00000398179 GDPD3Q7L5L3 318 aa12.44□□□□□ -0.42
CCBE1-201ENST00000398179 DAGLBQ8NCG7 672 aa12.44□□□□□ -0.42
CCBE1-201ENST00000398179 ZNF354BQ96LW1 612 aa12.44□□□□□ -0.42
CCBE1-201ENST00000398179 ZFP57Q9NU63 452 aa12.44□□□□□ -0.42
CCBE1-201ENST00000398179 ALG6Q9Y672 507 aa12.44□□□□□ -0.42
CCBE1-201ENST00000398179 BORCS7-ASMTA0A0B4J1R7 106 aa12.44□□□□□ -0.42
CCBE1-201ENST00000398179 RFPL4AA6NLU0 287 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms