RNA–Protein interactions for RNA: ENST00000397906.6

TTC28-201, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TTC28, Length 11,795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-201ENST00000397906 PLEKHA6Q9Y2H5 1048 aa10.99□□□□□ -0.65
TTC28-201ENST00000397906 AGR2O95994 175 aa10.99□□□□□ -0.65
TTC28-201ENST00000397906 PUDPQ08623 228 aa10.99□□□□□ -0.65
TTC28-201ENST00000397906 MFSD5Q6N075 450 aa10.99□□□□□ -0.65
TTC28-201ENST00000397906 SVOPLQ8N434 492 aa10.99□□□□□ -0.65
TTC28-201ENST00000397906 ZNF865P0CJ78 1059 aaPredicted RBP10.99□□□□□ -0.65
TTC28-201ENST00000397906 E2F2Q14209 437 aa10.99□□□□□ -0.65
TTC28-201ENST00000397906 SLC5A9Q2M3M2 681 aa10.99□□□□□ -0.65
TTC28-201ENST00000397906 DEFB134Q4QY38 66 aa10.99□□□□□ -0.65
TTC28-201ENST00000397906 ZNF641Q96N77 438 aaPredicted RBP10.99□□□□□ -0.65
TTC28-201ENST00000397906 NPLQ9BXD5 320 aaPredicted RBP10.99□□□□□ -0.65
TTC28-201ENST00000397906 CD244Q9BZW8 370 aa10.99□□□□□ -0.65
TTC28-201ENST00000397906 THUMPD1Q9NXG2 353 aaKnown RBP10.99□□□□□ -0.65
TTC28-201ENST00000397906 TRBC2A0A5B9 178 aa10.99□□□□□ -0.65
TTC28-201ENST00000397906 RAP2AP10114 183 aa10.99□□□□□ -0.65
TTC28-201ENST00000397906 UFM1P61960 85 aa10.99□□□□□ -0.65
TTC28-201ENST00000397906 PPP1R8Q12972 351 aaKnown RBP10.99□□□□□ -0.65
TTC28-201ENST00000397906 ADNP2Q6IQ32 1131 aa10.99□□□□□ -0.65
TTC28-201ENST00000397906 BOLLQ8N9W6 283 aaKnown RBP10.99□□□□□ -0.65
TTC28-201ENST00000397906 PIK3R3Q92569 461 aa10.99□□□□□ -0.65
TTC28-201ENST00000397906 IGSF8Q969P0 613 aa10.99□□□□□ -0.65
TTC28-201ENST00000397906 OR7A10O76100 309 aa10.99□□□□□ -0.65
TTC28-201ENST00000397906 CSTF1Q05048 431 aaKnown RBP10.99□□□□□ -0.65
TTC28-201ENST00000397906 KLHL26Q53HC5 615 aa10.99□□□□□ -0.65
TTC28-201ENST00000397906 ZNF615Q8N8J6 731 aa10.99□□□□□ -0.65
TTC28-201ENST00000397906 LMAN1LQ9HAT1 526 aa10.99□□□□□ -0.65
TTC28-201ENST00000397906 ACSL5Q9ULC5 683 aa10.99□□□□□ -0.65
TTC28-201ENST00000397906 PCDHGA6Q9Y5G7 932 aa10.99□□□□□ -0.65
TTC28-201ENST00000397906 DNAJA2O60884 412 aa10.99□□□□□ -0.65
TTC28-201ENST00000397906 ACRV1P26436 265 aa10.99□□□□□ -0.65
TTC28-201ENST00000397906 RAB28P51157 221 aa10.99□□□□□ -0.65
TTC28-201ENST00000397906 FITM2Q8N6M3 262 aa10.99□□□□□ -0.65
TTC28-201ENST00000397906 LRRC46Q96FV0 321 aa10.99□□□□□ -0.65
TTC28-201ENST00000397906 CENPNQ96H22 339 aaPredicted RBP10.99□□□□□ -0.65
TTC28-201ENST00000397906 DCBLD2Q96PD2 775 aa10.99□□□□□ -0.65
TTC28-201ENST00000397906 SNTG1Q9NSN8 517 aa10.99□□□□□ -0.65
TTC28-201ENST00000397906 PGRP06401 933 aa10.99□□□□□ -0.65
TTC28-201ENST00000397906 GPIP06744 558 aa10.99□□□□□ -0.65
TTC28-201ENST00000397906 ASGR2P07307 311 aa10.99□□□□□ -0.65
TTC28-201ENST00000397906 STC1P52823 247 aa10.99□□□□□ -0.65
TTC28-201ENST00000397906 MLLT1Q03111 559 aaPredicted RBP10.99□□□□□ -0.65
TTC28-201ENST00000397906 TGFBIQ15582 683 aa10.99□□□□□ -0.65
TTC28-201ENST00000397906 DEFB133Q30KQ1 61 aa10.99□□□□□ -0.65
TTC28-201ENST00000397906 KLHL22Q53GT1 634 aa10.99□□□□□ -0.65
TTC28-201ENST00000397906 OR10G2Q8NGC3 310 aa10.99□□□□□ -0.65
TTC28-201ENST00000397906 TEPSINQ96N21 525 aa10.99□□□□□ -0.65
TTC28-201ENST00000397906 ATXN7L1Q9ULK2 861 aaPredicted RBP10.99□□□□□ -0.65
TTC28-201ENST00000397906 MEIS3P2A8K0S8 358 aa10.99□□□□□ -0.65
TTC28-201ENST00000397906 AIREO43918 545 aa10.99□□□□□ -0.65
TTC28-201ENST00000397906 THEGLP0DJG4 465 aa10.99□□□□□ -0.65
TTC28-201ENST00000397906 C6P13671 934 aa10.99□□□□□ -0.65
TTC28-201ENST00000397906 NTSR1P30989 418 aa10.99□□□□□ -0.65
TTC28-201ENST00000397906 GBX2P52951 348 aaPredicted RBP10.99□□□□□ -0.65
TTC28-201ENST00000397906 ARFRP1Q13795 201 aa10.99□□□□□ -0.65
TTC28-201ENST00000397906 ZSCAN4Q8NAM6 433 aaPredicted RBP10.99□□□□□ -0.65
TTC28-201ENST00000397906 IL17FQ96PD4 163 aa10.99□□□□□ -0.65
TTC28-201ENST00000397906 ATXN10Q9UBB4 475 aa10.99□□□□□ -0.65
TTC28-201ENST00000397906 FAM240BA0A1B0GVZ2 78 aa10.98□□□□□ -0.65
TTC28-201ENST00000397906 CREB1P16220 341 aa10.98□□□□□ -0.65
TTC28-201ENST00000397906 ENTPD1P49961 510 aa10.98□□□□□ -0.65
TTC28-201ENST00000397906 OR4D2P58180 307 aa10.98□□□□□ -0.65
TTC28-201ENST00000397906 GLYATL1Q969I3 302 aa10.98□□□□□ -0.65
TTC28-201ENST00000397906 C10orf71Q711Q0 1435 aa10.98□□□□□ -0.65
TTC28-201ENST00000397906 FAM170BA6NMN3 283 aa10.98□□□□□ -0.65
TTC28-201ENST00000397906 VEGFDO43915 354 aa10.98□□□□□ -0.65
TTC28-201ENST00000397906 TACSTD2P09758 323 aa10.98□□□□□ -0.65
TTC28-201ENST00000397906 ACTL8Q9H568 366 aa10.98□□□□□ -0.65
TTC28-201ENST00000397906 RPS15P62841 145 aaKnown RBP10.98□□□□□ -0.65
TTC28-201ENST00000397906 DUOXA1Q1HG43 343 aa10.98□□□□□ -0.65
TTC28-201ENST00000397906 IQCCQ4KMZ1 466 aa10.98□□□□□ -0.65
TTC28-201ENST00000397906 RBM48Q5RL73 367 aaKnown RBP10.98□□□□□ -0.65
TTC28-201ENST00000397906 DNM1P34Q6PK57 102 aa10.98□□□□□ -0.65
TTC28-201ENST00000397906 ABHD5Q8WTS1 349 aa10.98□□□□□ -0.65
TTC28-201ENST00000397906 TESCQ96BS2 214 aa10.98□□□□□ -0.65
TTC28-201ENST00000397906 RADILQ96JH8 1075 aa10.98□□□□□ -0.65
TTC28-201ENST00000397906 COMMD3Q9UBI1 195 aa10.98□□□□□ -0.65
TTC28-201ENST00000397906 PADI2Q9Y2J8 665 aa10.98□□□□□ -0.65
TTC28-201ENST00000397906 TMA7Q9Y2S6 64 aaKnown RBP10.98□□□□□ -0.65
TTC28-201ENST00000397906 MYH13Q9UKX3 1938 aa10.98□□□□□ -0.65
TTC28-201ENST00000397906 C2orf92A0A1B0GVN3 265 aa10.98□□□□□ -0.65
TTC28-201ENST00000397906 ZNF840PA6NDX5 716 aa10.98□□□□□ -0.65
TTC28-201ENST00000397906 CDKL1Q00532 357 aa10.98□□□□□ -0.65
TTC28-201ENST00000397906 ASPGQ86U10 573 aa10.98□□□□□ -0.65
TTC28-201ENST00000397906 TTC9BQ8N6N2 239 aa10.98□□□□□ -0.65
TTC28-201ENST00000397906 DNAJA4Q8WW22 397 aaPredicted RBP10.98□□□□□ -0.65
TTC28-201ENST00000397906 CHIAQ9BZP6 476 aa10.98□□□□□ -0.65
TTC28-201ENST00000397906 C8orf33Q9H7E9 229 aaPredicted RBP10.98□□□□□ -0.65
TTC28-201ENST00000397906 A0A1W2PRG6 482 aa10.98□□□□□ -0.65
TTC28-201ENST00000397906 GABRA3P34903 492 aa10.98□□□□□ -0.65
TTC28-201ENST00000397906 HHEXQ03014 270 aa10.98□□□□□ -0.65
TTC28-201ENST00000397906 SLC3A1Q07837 685 aa10.98□□□□□ -0.65
TTC28-201ENST00000397906 DEFB110Q30KQ9 67 aa10.98□□□□□ -0.65
TTC28-201ENST00000397906 LRRC3Q9BY71 257 aa10.98□□□□□ -0.65
TTC28-201ENST00000397906 POLE3Q9NRF9 147 aa10.98□□□□□ -0.65
TTC28-201ENST00000397906 CLPXO76031 633 aa10.98□□□□□ -0.65
TTC28-201ENST00000397906 G6PDP11413 515 aa10.98□□□□□ -0.65
TTC28-201ENST00000397906 PDCD4Q53EL6 469 aaKnown RBP10.98□□□□□ -0.65
TTC28-201ENST00000397906 NECTIN4Q96NY8 510 aa10.98□□□□□ -0.65
TTC28-201ENST00000397906 RGPD2P0DJD1 1756 aa10.98□□□□□ -0.65
TTC28-201ENST00000397906 J3QLW9 94 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms