RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 OR7A10O76100 309 aa15.43■□□□□ 0.06
CHMP1A-201ENST00000397901 CCNDBP1O95273 360 aa15.43■□□□□ 0.06
CHMP1A-201ENST00000397901 CLDN9O95484 217 aa15.43■□□□□ 0.06
CHMP1A-201ENST00000397901 IL1RNP18510 177 aa15.43■□□□□ 0.06
CHMP1A-201ENST00000397901 EFNA1P20827 205 aaPredicted RBP15.43■□□□□ 0.06
CHMP1A-201ENST00000397901 HOXA9P31269 272 aa15.43■□□□□ 0.06
CHMP1A-201ENST00000397901 TIE1P35590 1138 aa15.43■□□□□ 0.06
CHMP1A-201ENST00000397901 SOX6P35712 828 aa15.43■□□□□ 0.06
CHMP1A-201ENST00000397901 PIK3CBP42338 1070 aa15.43■□□□□ 0.06
CHMP1A-201ENST00000397901 VLDLRP98155 873 aa15.43■□□□□ 0.06
CHMP1A-201ENST00000397901 CCDC71Q8IV32 467 aaPredicted RBP15.43■□□□□ 0.06
CHMP1A-201ENST00000397901 ADGRG2Q8IZP9 1017 aa15.43■□□□□ 0.06
CHMP1A-201ENST00000397901 CHCHD4Q8N4Q1 142 aa15.43■□□□□ 0.06
CHMP1A-201ENST00000397901 ST13P5Q8NFI4 369 aaPredicted RBP15.43■□□□□ 0.06
CHMP1A-201ENST00000397901 DEDD2Q8WXF8 326 aa15.43■□□□□ 0.06
CHMP1A-201ENST00000397901 CEP19Q96LK0 163 aa15.43■□□□□ 0.06
CHMP1A-201ENST00000397901 SLC30A2Q9BRI3 323 aa15.43■□□□□ 0.06
CHMP1A-201ENST00000397901 TSEN34Q9BSV6 310 aaKnown RBP15.43■□□□□ 0.06
CHMP1A-201ENST00000397901 C1QTNF7Q9BXJ2 289 aa15.43■□□□□ 0.06
CHMP1A-201ENST00000397901 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.43■□□□□ 0.062e-7■■■■□ 21.5
CHMP1A-201ENST00000397901 ZNF556Q9HAH1 456 aa15.43■□□□□ 0.06
CHMP1A-201ENST00000397901 IL1RAPQ9NPH3 570 aa15.43■□□□□ 0.06
CHMP1A-201ENST00000397901 KRT84Q9NSB2 600 aa15.43■□□□□ 0.06
CHMP1A-201ENST00000397901 NUFIP1Q9UHK0 495 aaKnown RBP15.43■□□□□ 0.06
CHMP1A-201ENST00000397901 A0A1B0GVM2 712 aa15.42■□□□□ 0.06
CHMP1A-201ENST00000397901 OR6C70A6NIJ9 312 aa15.42■□□□□ 0.06
CHMP1A-201ENST00000397901 UPK3BL1B0FP48 263 aa15.42■□□□□ 0.06
CHMP1A-201ENST00000397901 NT5C1B-RDH14C9J2C7 533 aa15.42■□□□□ 0.06
CHMP1A-201ENST00000397901 UPK3BL2E5RIL1 263 aa15.42■□□□□ 0.06
CHMP1A-201ENST00000397901 MLLT3P42568 568 aaPredicted RBP15.42■□□□□ 0.06
CHMP1A-201ENST00000397901 SEMG2Q02383 582 aa15.42■□□□□ 0.06
CHMP1A-201ENST00000397901 NOGQ13253 232 aa15.42■□□□□ 0.06
CHMP1A-201ENST00000397901 NFATC2Q13469 925 aa15.42■□□□□ 0.06
CHMP1A-201ENST00000397901 MRPL58Q14197 206 aaKnown RBP15.42■□□□□ 0.06
CHMP1A-201ENST00000397901 LHX8Q68G74 356 aa15.42■□□□□ 0.06
CHMP1A-201ENST00000397901 CREB3L2Q70SY1 520 aa15.42■□□□□ 0.06
CHMP1A-201ENST00000397901 TCTE3Q8IZS6 198 aa15.42■□□□□ 0.06
CHMP1A-201ENST00000397901 SIGLEC11Q96RL6 698 aa15.42■□□□□ 0.06
CHMP1A-201ENST00000397901 K7ERQ8 282 aa15.42■□□□□ 0.06
CHMP1A-201ENST00000397901 M0R082 166 aa15.42■□□□□ 0.06
CHMP1A-201ENST00000397901 COCHO43405 550 aa15.42■□□□□ 0.06
CHMP1A-201ENST00000397901 DNTTP04053 509 aa15.42■□□□□ 0.06
CHMP1A-201ENST00000397901 FABP3P05413 133 aa15.42■□□□□ 0.06
CHMP1A-201ENST00000397901 PSKH1P11801 424 aa15.42■□□□□ 0.06
CHMP1A-201ENST00000397901 HOXB9P17482 250 aaPredicted RBP15.42■□□□□ 0.06
CHMP1A-201ENST00000397901 SDC1P18827 310 aa15.42■□□□□ 0.06
CHMP1A-201ENST00000397901 EPORP19235 508 aa15.42■□□□□ 0.06
CHMP1A-201ENST00000397901 CBLP22681 906 aa15.42■□□□□ 0.06
CHMP1A-201ENST00000397901 DNAJA1P31689 397 aaKnown RBP15.42■□□□□ 0.06
CHMP1A-201ENST00000397901 GPR17Q13304 367 aa15.42■□□□□ 0.06
CHMP1A-201ENST00000397901 TNK1Q13470 666 aa15.42■□□□□ 0.06
CHMP1A-201ENST00000397901 EFR3AQ14156 821 aa15.42■□□□□ 0.06
CHMP1A-201ENST00000397901 RTP2Q5QGT7 225 aa15.42■□□□□ 0.06
CHMP1A-201ENST00000397901 CD99L2Q8TCZ2 262 aa15.42■□□□□ 0.06
CHMP1A-201ENST00000397901 APIPQ96GX9 242 aa15.42■□□□□ 0.06
CHMP1A-201ENST00000397901 MYO19Q96H55 970 aa15.42■□□□□ 0.06
CHMP1A-201ENST00000397901 APOLD1Q96LR9 279 aa15.42■□□□□ 0.06
CHMP1A-201ENST00000397901 DPH2Q9BQC3 489 aaPredicted RBP15.42■□□□□ 0.06
CHMP1A-201ENST00000397901 EBPLQ9BY08 206 aa15.42■□□□□ 0.06
CHMP1A-201ENST00000397901 ELOVL6Q9H5J4 265 aa15.42■□□□□ 0.06
CHMP1A-201ENST00000397901 TMEM161AQ9NX61 479 aa15.42■□□□□ 0.06
CHMP1A-201ENST00000397901 SIRT5Q9NXA8 310 aa15.42■□□□□ 0.06
CHMP1A-201ENST00000397901 B3GNT2Q9NY97 397 aa15.42■□□□□ 0.06
CHMP1A-201ENST00000397901 CRLS1Q9UJA2 301 aa15.42■□□□□ 0.06
CHMP1A-201ENST00000397901 NDRG4Q9ULP0 352 aaKnown RBP15.42■□□□□ 0.06
CHMP1A-201ENST00000397901 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP15.42■□□□□ 0.06
CHMP1A-201ENST00000397901 BET1O15155 118 aa15.41■□□□□ 0.06
CHMP1A-201ENST00000397901 FZD6O60353 706 aa15.41■□□□□ 0.06
CHMP1A-201ENST00000397901 STC2O76061 302 aa15.41■□□□□ 0.06
CHMP1A-201ENST00000397901 ITGALP20701 1170 aa15.41■□□□□ 0.06
CHMP1A-201ENST00000397901 FPR1P21462 350 aa15.41■□□□□ 0.06
CHMP1A-201ENST00000397901 RPS3P23396 243 aaKnown RBP eCLIP15.41■□□□□ 0.063e-6■■■■□ 19.8
CHMP1A-201ENST00000397901 GKP32189 559 aa15.41■□□□□ 0.06
CHMP1A-201ENST00000397901 GATMP50440 423 aa15.41■□□□□ 0.06
CHMP1A-201ENST00000397901 CD83Q01151 205 aa15.41■□□□□ 0.06
CHMP1A-201ENST00000397901 CREMQ03060 361 aa15.41■□□□□ 0.06
CHMP1A-201ENST00000397901 GPRC6AQ5T6X5 926 aa15.41■□□□□ 0.06
CHMP1A-201ENST00000397901 ARMC12Q5T9G4 340 aa15.41■□□□□ 0.06
CHMP1A-201ENST00000397901 SLC46A3Q7Z3Q1 461 aa15.41■□□□□ 0.06
CHMP1A-201ENST00000397901 RNF175Q8N4F7 328 aa15.41■□□□□ 0.06
CHMP1A-201ENST00000397901 MRPL9Q9BYD2 267 aaKnown RBP15.41■□□□□ 0.06
CHMP1A-201ENST00000397901 ZFYVE1Q9HBF4 777 aa15.41■□□□□ 0.06
CHMP1A-201ENST00000397901 IL26Q9NPH9 171 aa15.41■□□□□ 0.06
CHMP1A-201ENST00000397901 ARL15Q9NXU5 204 aa15.41■□□□□ 0.06
CHMP1A-201ENST00000397901 KLHL20Q9Y2M5 609 aa15.41■□□□□ 0.06
CHMP1A-201ENST00000397901 RWDD3Q9Y3V2 267 aa15.41■□□□□ 0.06
CHMP1A-201ENST00000397901 PIKFYVEQ9Y2I7 2098 aa15.41■□□□□ 0.06
CHMP1A-201ENST00000397901 CLDN7O95471 211 aa15.41■□□□□ 0.06
CHMP1A-201ENST00000397901 TIGD6Q17RP2 521 aa15.41■□□□□ 0.06
CHMP1A-201ENST00000397901 ARMCX4Q5H9R4 360 aa15.41■□□□□ 0.06
CHMP1A-201ENST00000397901 KIAA1614Q5VZ46 1190 aa15.41■□□□□ 0.06
CHMP1A-201ENST00000397901 PRSS55Q6UWB4 352 aaPredicted RBP15.41■□□□□ 0.06
CHMP1A-201ENST00000397901 Q6ZPB1 254 aaPredicted RBP15.41■□□□□ 0.06
CHMP1A-201ENST00000397901 AMIGO1Q86WK6 493 aa15.41■□□□□ 0.06
CHMP1A-201ENST00000397901 DNAJB8Q8NHS0 232 aa15.41■□□□□ 0.06
CHMP1A-201ENST00000397901 UBTD2Q8WUN7 234 aa15.41■□□□□ 0.06
CHMP1A-201ENST00000397901 CCDC120Q96HB5 630 aa15.41■□□□□ 0.06
CHMP1A-201ENST00000397901 HSH2DQ96JZ2 352 aa15.41■□□□□ 0.06
CHMP1A-201ENST00000397901 TRNT1Q96Q11 434 aaKnown RBP15.41■□□□□ 0.06
CHMP1A-201ENST00000397901 UCK2Q9BZX2 261 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms