RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 DDCP20711 480 aa5.64□□□□□ -1.51
PTPRD-206ENST00000397617 GSTM3P21266 225 aa5.64□□□□□ -1.51
PTPRD-206ENST00000397617 RPL38P63173 70 aaKnown RBP5.64□□□□□ -1.51
PTPRD-206ENST00000397617 NAE1Q13564 534 aa5.64□□□□□ -1.51
PTPRD-206ENST00000397617 ANKDD1AQ495B1 522 aa5.64□□□□□ -1.51
PTPRD-206ENST00000397617 REEP3Q6NUK4 255 aa5.64□□□□□ -1.51
PTPRD-206ENST00000397617 SHQ1Q6PI26 577 aaKnown RBP5.64□□□□□ -1.51
PTPRD-206ENST00000397617 SLC9B2Q86UD5 537 aa5.64□□□□□ -1.51
PTPRD-206ENST00000397617 KMT5CQ86Y97 462 aa5.64□□□□□ -1.51
PTPRD-206ENST00000397617 PPP1R13LQ8WUF5 828 aa5.64□□□□□ -1.51
PTPRD-206ENST00000397617 PRR11Q96HE9 360 aaPredicted RBP5.64□□□□□ -1.51
PTPRD-206ENST00000397617 SLC17A9Q9BYT1 436 aa5.64□□□□□ -1.51
PTPRD-206ENST00000397617 VAPAQ9P0L0 249 aa5.64□□□□□ -1.51
PTPRD-206ENST00000397617 CSNK1G3Q9Y6M4 447 aa5.64□□□□□ -1.51
PTPRD-206ENST00000397617 RFPL2O75678 378 aa5.64□□□□□ -1.51
PTPRD-206ENST00000397617 NTRK1P04629 796 aa5.64□□□□□ -1.51
PTPRD-206ENST00000397617 CEBPBP17676 345 aa5.64□□□□□ -1.51
PTPRD-206ENST00000397617 ZFP36L2P47974 494 aaKnown RBP5.64□□□□□ -1.51
PTPRD-206ENST00000397617 SMAD4Q13485 552 aaKnown RBP5.64□□□□□ -1.51
PTPRD-206ENST00000397617 SQSTM1Q13501 440 aa5.64□□□□□ -1.51
PTPRD-206ENST00000397617 GRB7Q14451 532 aa5.64□□□□□ -1.51
PTPRD-206ENST00000397617 CPSF6Q16630 551 aaKnown RBP eCLIP5.64□□□□□ -1.51
PTPRD-206ENST00000397617 CYP51A1Q16850 503 aa5.64□□□□□ -1.51
PTPRD-206ENST00000397617 SLC36A3Q495N2 470 aa5.64□□□□□ -1.51
PTPRD-206ENST00000397617 TMEM215Q68D42 235 aa5.64□□□□□ -1.51
PTPRD-206ENST00000397617 CLEC6AQ6EIG7 209 aa5.64□□□□□ -1.51
PTPRD-206ENST00000397617 TMEM220Q6QAJ8 160 aa5.64□□□□□ -1.51
PTPRD-206ENST00000397617 CDH24Q86UP0 819 aa5.64□□□□□ -1.51
PTPRD-206ENST00000397617 HIPK4Q8NE63 616 aa5.64□□□□□ -1.51
PTPRD-206ENST00000397617 CADM4Q8NFZ8 388 aa5.64□□□□□ -1.51
PTPRD-206ENST00000397617 REXO4Q9GZR2 422 aaKnown RBP5.64□□□□□ -1.51
PTPRD-206ENST00000397617 TNKS2Q9H2K2 1166 aa5.64□□□□□ -1.51
PTPRD-206ENST00000397617 LYRM4Q9HD34 91 aa5.64□□□□□ -1.51
PTPRD-206ENST00000397617 GIMAP4Q9NUV9 329 aa5.64□□□□□ -1.51
PTPRD-206ENST00000397617 NKX1-2Q9UD57 310 aaPredicted RBP5.64□□□□□ -1.51
PTPRD-206ENST00000397617 KCND3Q9UK17 655 aa5.64□□□□□ -1.51
PTPRD-206ENST00000397617 TPRKBQ9Y3C4 175 aa5.64□□□□□ -1.51
PTPRD-206ENST00000397617 TBC1D3KA0A087X1G2 549 aa5.64□□□□□ -1.51
PTPRD-206ENST00000397617 ATP6AP2A0A1C7CYW4 349 aa5.64□□□□□ -1.51
PTPRD-206ENST00000397617 TBC1D3FA6NER0 549 aaPredicted RBP5.64□□□□□ -1.51
PTPRD-206ENST00000397617 SRPX2O60687 465 aaPredicted RBP5.64□□□□□ -1.51
PTPRD-206ENST00000397617 ATP6AP2O75787 350 aa5.64□□□□□ -1.51
PTPRD-206ENST00000397617 ALPLP05186 524 aa5.64□□□□□ -1.51
PTPRD-206ENST00000397617 ANXA4P09525 319 aaPredicted RBP5.64□□□□□ -1.51
PTPRD-206ENST00000397617 CAPGP40121 348 aa5.64□□□□□ -1.51
PTPRD-206ENST00000397617 GRIA3P42263 894 aa5.64□□□□□ -1.51
PTPRD-206ENST00000397617 ADARB1P78563 741 aaKnown RBP5.64□□□□□ -1.51
PTPRD-206ENST00000397617 PRR5P85299 388 aa5.64□□□□□ -1.51
PTPRD-206ENST00000397617 PDK3Q15120 406 aa5.64□□□□□ -1.51
PTPRD-206ENST00000397617 TCEA2Q15560 299 aa5.64□□□□□ -1.51
PTPRD-206ENST00000397617 SLC5A12Q1EHB4 618 aa5.64□□□□□ -1.51
PTPRD-206ENST00000397617 SPANXN4Q5MJ08 99 aa5.64□□□□□ -1.51
PTPRD-206ENST00000397617 KHDRBS2Q5VWX1 349 aaKnown RBP5.64□□□□□ -1.51
PTPRD-206ENST00000397617 TBC1D3GQ6DHY5 549 aa5.64□□□□□ -1.51
PTPRD-206ENST00000397617 ASTLQ6HA08 431 aaPredicted RBP5.64□□□□□ -1.51
PTPRD-206ENST00000397617 ABI3BPQ7Z7G0 1075 aa5.64□□□□□ -1.51
PTPRD-206ENST00000397617 HS6ST3Q8IZP7 471 aa5.64□□□□□ -1.51
PTPRD-206ENST00000397617 CAMKK1Q8N5S9 505 aa5.64□□□□□ -1.51
PTPRD-206ENST00000397617 HOXB13Q92826 284 aaPredicted RBP5.64□□□□□ -1.51
PTPRD-206ENST00000397617 TCEAL4Q96EI5 215 aa5.64□□□□□ -1.51
PTPRD-206ENST00000397617 CXorf56Q9H5V9 222 aa5.64□□□□□ -1.51
PTPRD-206ENST00000397617 INVSQ9Y283 1065 aa5.64□□□□□ -1.51
PTPRD-206ENST00000397617 AK5Q9Y6K8 562 aa5.64□□□□□ -1.51
PTPRD-206ENST00000397617 WDR87Q6ZQQ6 2873 aa5.64□□□□□ -1.51
PTPRD-206ENST00000397617 POLEQ07864 2286 aa5.63□□□□□ -1.51
PTPRD-206ENST00000397617 CLIC1O00299 241 aa5.63□□□□□ -1.51
PTPRD-206ENST00000397617 RPSAP08865 295 aaKnown RBP5.63□□□□□ -1.51
PTPRD-206ENST00000397617 UGT1A6P19224 532 aa5.63□□□□□ -1.51
PTPRD-206ENST00000397617 UGT1A1P22309 533 aa5.63□□□□□ -1.51
PTPRD-206ENST00000397617 PEX2P28328 305 aa5.63□□□□□ -1.51
PTPRD-206ENST00000397617 KRT20P35900 424 aa5.63□□□□□ -1.51
PTPRD-206ENST00000397617 P2RY2P41231 377 aa5.63□□□□□ -1.51
PTPRD-206ENST00000397617 CPA2P48052 419 aa5.63□□□□□ -1.51
PTPRD-206ENST00000397617 FNDC3BQ53EP0 1204 aaKnown RBP5.63□□□□□ -1.51
PTPRD-206ENST00000397617 LDB1Q86U70 411 aaPredicted RBP5.63□□□□□ -1.51
PTPRD-206ENST00000397617 SYT12Q8IV01 421 aa5.63□□□□□ -1.51
PTPRD-206ENST00000397617 ZNF547Q8IVP9 402 aa5.63□□□□□ -1.51
PTPRD-206ENST00000397617 TMCO5AQ8N6Q1 288 aa5.63□□□□□ -1.51
PTPRD-206ENST00000397617 GAL3ST3Q96A11 431 aa5.63□□□□□ -1.51
PTPRD-206ENST00000397617 MSLNLQ96KJ4 702 aa5.63□□□□□ -1.51
PTPRD-206ENST00000397617 KCNC2Q96PR1 638 aa5.63□□□□□ -1.51
PTPRD-206ENST00000397617 PANX1Q96RD7 426 aa5.63□□□□□ -1.51
PTPRD-206ENST00000397617 ZNF607Q96SK3 696 aa5.63□□□□□ -1.51
PTPRD-206ENST00000397617 SMG9Q9H0W8 520 aaKnown RBP5.63□□□□□ -1.51
PTPRD-206ENST00000397617 POLMQ9NP87 494 aaPredicted RBP5.63□□□□□ -1.51
PTPRD-206ENST00000397617 ACAD8Q9UKU7 415 aa5.63□□□□□ -1.51
PTPRD-206ENST00000397617 VPS4AQ9UN37 437 aa5.63□□□□□ -1.51
PTPRD-206ENST00000397617 MPDZO75970 2070 aa5.63□□□□□ -1.51
PTPRD-206ENST00000397617 C1orf226A1L170 272 aa5.63□□□□□ -1.51
PTPRD-206ENST00000397617 YKT6O15498 198 aa5.63□□□□□ -1.51
PTPRD-206ENST00000397617 UGT2B11O75310 529 aa5.63□□□□□ -1.51
PTPRD-206ENST00000397617 TNFRSF21O75509 655 aa5.63□□□□□ -1.51
PTPRD-206ENST00000397617 ITIH1P19827 911 aa5.63□□□□□ -1.51
PTPRD-206ENST00000397617 PKLRP30613 574 aa5.63□□□□□ -1.51
PTPRD-206ENST00000397617 DNAJA1P31689 397 aaKnown RBP5.63□□□□□ -1.51
PTPRD-206ENST00000397617 GZMMP51124 257 aa5.63□□□□□ -1.51
PTPRD-206ENST00000397617 MERTKQ12866 999 aa5.63□□□□□ -1.51
PTPRD-206ENST00000397617 VPS26BQ4G0F5 336 aa5.63□□□□□ -1.51
PTPRD-206ENST00000397617 DET1Q7L5Y6 550 aa5.63□□□□□ -1.51
PTPRD-206ENST00000397617 RABEPKQ7Z6M1 372 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms