RNA–Protein interactions for RNA: ENST00000397404.5

TSPAN4-204, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-204ENST00000397404 LIX1Q8N485 282 aa18.2■□□□□ 0.5
TSPAN4-204ENST00000397404 KCNC2Q96PR1 638 aa18.2■□□□□ 0.5
TSPAN4-204ENST00000397404 TBCDQ9BTW9 1192 aa18.2■□□□□ 0.5
TSPAN4-204ENST00000397404 REXO4Q9GZR2 422 aaKnown RBP18.2■□□□□ 0.5
TSPAN4-204ENST00000397404 RNF215Q9Y6U7 377 aa18.2■□□□□ 0.5
TSPAN4-204ENST00000397404 PCDH15Q96QU1 1955 aa18.19■□□□□ 0.5
TSPAN4-204ENST00000397404 CABIN1Q9Y6J0 2220 aa18.19■□□□□ 0.5
TSPAN4-204ENST00000397404 FEZF1A0PJY2 475 aa18.19■□□□□ 0.5
TSPAN4-204ENST00000397404 ARHGAP10A1A4S6 786 aa18.19■□□□□ 0.5
TSPAN4-204ENST00000397404 LRIT2A6NDA9 550 aa18.19■□□□□ 0.5
TSPAN4-204ENST00000397404 B2RBV5 119 aa18.19■□□□□ 0.5
TSPAN4-204ENST00000397404 ANKRD28O15084 1053 aa18.19■□□□□ 0.5
TSPAN4-204ENST00000397404 NRP2O60462 931 aa18.19■□□□□ 0.5
TSPAN4-204ENST00000397404 SRPX2O60687 465 aaPredicted RBP18.19■□□□□ 0.5
TSPAN4-204ENST00000397404 TGFB1P01137 390 aa18.19■□□□□ 0.5
TSPAN4-204ENST00000397404 RETP07949 1114 aa18.19■□□□□ 0.5
TSPAN4-204ENST00000397404 CDH3P22223 829 aa18.19■□□□□ 0.5
TSPAN4-204ENST00000397404 BCL6P41182 706 aa18.19■□□□□ 0.5
TSPAN4-204ENST00000397404 SKP1P63208 163 aa18.19■□□□□ 0.5
TSPAN4-204ENST00000397404 MXRA7P84157 204 aa18.19■□□□□ 0.5
TSPAN4-204ENST00000397404 SRSF11Q05519 484 aaKnown RBP18.19■□□□□ 0.5
TSPAN4-204ENST00000397404 ACTN3Q08043 901 aaPredicted RBP18.19■□□□□ 0.5
TSPAN4-204ENST00000397404 PAOXQ6QHF9 649 aa18.19■□□□□ 0.5
TSPAN4-204ENST00000397404 ASPGQ86U10 573 aa18.19■□□□□ 0.5
TSPAN4-204ENST00000397404 C1orf52Q8N6N3 182 aaKnown RBP18.19■□□□□ 0.5
TSPAN4-204ENST00000397404 SLC7A6OSQ96CW6 309 aaPredicted RBP18.19■□□□□ 0.5
TSPAN4-204ENST00000397404 SPDL1Q96EA4 605 aa18.19■□□□□ 0.5
TSPAN4-204ENST00000397404 ZNF764Q96H86 408 aaPredicted RBP18.19■□□□□ 0.5
TSPAN4-204ENST00000397404 MARK4Q96L34 752 aa18.19■□□□□ 0.5
TSPAN4-204ENST00000397404 CLMPQ9H6B4 373 aa18.19■□□□□ 0.5
TSPAN4-204ENST00000397404 GID8Q9NWU2 228 aa18.19■□□□□ 0.5
TSPAN4-204ENST00000397404 GIMAP2Q9UG22 337 aa18.19■□□□□ 0.5
TSPAN4-204ENST00000397404 LEF1Q9UJU2 399 aaPredicted RBP18.19■□□□□ 0.5
TSPAN4-204ENST00000397404 PILRAQ9UKJ1 303 aa18.19■□□□□ 0.5
TSPAN4-204ENST00000397404 TMEM131Q92545 1883 aa18.18■□□□□ 0.5
TSPAN4-204ENST00000397404 IGHV1OR21-1A0A087WYE8 117 aa18.18■□□□□ 0.5
TSPAN4-204ENST00000397404 CCDC154A6NI56 674 aa18.18■□□□□ 0.5
TSPAN4-204ENST00000397404 CAPN5O15484 640 aaPredicted RBP18.18■□□□□ 0.5
TSPAN4-204ENST00000397404 NDUFS4O43181 175 aa18.18■□□□□ 0.5
TSPAN4-204ENST00000397404 PCDH7O60245 1069 aa18.18■□□□□ 0.5
TSPAN4-204ENST00000397404 ANXA4P09525 319 aaPredicted RBP18.18■□□□□ 0.5
TSPAN4-204ENST00000397404 SDC1P18827 310 aa18.18■□□□□ 0.5
TSPAN4-204ENST00000397404 HPCAL1P37235 193 aa18.18■□□□□ 0.5
TSPAN4-204ENST00000397404 HNRNPFP52597 415 aaKnown RBP18.18■□□□□ 0.5
TSPAN4-204ENST00000397404 FOXM1Q08050 763 aa18.18■□□□□ 0.5
TSPAN4-204ENST00000397404 SLC14A1Q13336 389 aa18.18■□□□□ 0.5
TSPAN4-204ENST00000397404 ART3Q13508 389 aa18.18■□□□□ 0.5
TSPAN4-204ENST00000397404 TRIM40Q6P9F5 258 aa18.18■□□□□ 0.5
TSPAN4-204ENST00000397404 COMMD6Q7Z4G1 85 aa18.18■□□□□ 0.5
TSPAN4-204ENST00000397404 C19orf47Q8N9M1 422 aaKnown RBP18.18■□□□□ 0.5
TSPAN4-204ENST00000397404 OR2L5Q8NG80 312 aa18.18■□□□□ 0.5
TSPAN4-204ENST00000397404 SLC13A3Q8WWT9 602 aa18.18■□□□□ 0.5
TSPAN4-204ENST00000397404 JPH3Q8WXH2 748 aaPredicted RBP18.18■□□□□ 0.5
TSPAN4-204ENST00000397404 GAL3ST3Q96A11 431 aa18.18■□□□□ 0.5
TSPAN4-204ENST00000397404 TM4SF19Q96DZ7 209 aa18.18■□□□□ 0.5
TSPAN4-204ENST00000397404 OR2A5Q96R48 311 aa18.18■□□□□ 0.5
TSPAN4-204ENST00000397404 NRTNQ99748 197 aa18.18■□□□□ 0.5
TSPAN4-204ENST00000397404 SLC6A16Q9GZN6 736 aa18.18■□□□□ 0.5
TSPAN4-204ENST00000397404 SEMA5BQ9P283 1151 aa18.18■□□□□ 0.5
TSPAN4-204ENST00000397404 SDK1Q7Z5N4 2213 aa18.17■□□□□ 0.5
TSPAN4-204ENST00000397404 LOC100653049A0A140TA62 436 aa18.17■□□□□ 0.5
TSPAN4-204ENST00000397404 GNG14A0A1W2PPG7 69 aa18.17■□□□□ 0.5
TSPAN4-204ENST00000397404 EME2A4GXA9 379 aaPredicted RBP18.17■□□□□ 0.5
TSPAN4-204ENST00000397404 LCMT2O60294 686 aaKnown RBP18.17■□□□□ 0.5
TSPAN4-204ENST00000397404 FOXD2O60548 495 aaPredicted RBP18.17■□□□□ 0.5
TSPAN4-204ENST00000397404 LRP3O75074 770 aa18.17■□□□□ 0.5
TSPAN4-204ENST00000397404 EEDO75530 441 aaKnown RBP18.17■□□□□ 0.5
TSPAN4-204ENST00000397404 KRT34O76011 436 aa18.17■□□□□ 0.5
TSPAN4-204ENST00000397404 ETHE1O95571 254 aa18.17■□□□□ 0.5
TSPAN4-204ENST00000397404 C9P02748 559 aa18.17■□□□□ 0.5
TSPAN4-204ENST00000397404 TYRP1P17643 537 aa18.17■□□□□ 0.5
TSPAN4-204ENST00000397404 YBX1P67809 324 aaKnown RBP18.17■□□□□ 0.5
TSPAN4-204ENST00000397404 SPATS1Q496A3 300 aa18.17■□□□□ 0.5
TSPAN4-204ENST00000397404 FCRL6Q6DN72 434 aa18.17■□□□□ 0.5
TSPAN4-204ENST00000397404 PRMT9Q6P2P2 845 aa18.17■□□□□ 0.5
TSPAN4-204ENST00000397404 CAMKMTQ7Z624 323 aa18.17■□□□□ 0.5
TSPAN4-204ENST00000397404 FUNDC1Q8IVP5 155 aa18.17■□□□□ 0.5
TSPAN4-204ENST00000397404 TMEM74Q96NL1 305 aa18.17■□□□□ 0.5
TSPAN4-204ENST00000397404 TRAPPC9Q96Q05 1148 aa18.17■□□□□ 0.5
TSPAN4-204ENST00000397404 HOPXQ9BPY8 73 aaPredicted RBP18.17■□□□□ 0.5
TSPAN4-204ENST00000397404 OR51B5Q9H339 312 aa18.17■□□□□ 0.5
TSPAN4-204ENST00000397404 RMND5AQ9H871 391 aa18.17■□□□□ 0.5
TSPAN4-204ENST00000397404 DDX31Q9H8H2 851 aaKnown RBP18.17■□□□□ 0.5
TSPAN4-204ENST00000397404 MYNNQ9NPC7 610 aa18.17■□□□□ 0.5
TSPAN4-204ENST00000397404 C11orf16Q9NQ32 467 aa18.17■□□□□ 0.5
TSPAN4-204ENST00000397404 PRDM9Q9NQV7 894 aa18.17■□□□□ 0.5
TSPAN4-204ENST00000397404 ENAMQ9NRM1 1142 aa18.17■□□□□ 0.5
TSPAN4-204ENST00000397404 ATAD3AQ9NVI7 634 aa18.17■□□□□ 0.5
TSPAN4-204ENST00000397404 TAS2R1Q9NYW7 299 aa18.17■□□□□ 0.5
TSPAN4-204ENST00000397404 MN1Q10571 1320 aaPredicted RBP18.17■□□□□ 0.5
TSPAN4-204ENST00000397404 ZBTB11O95625 1053 aaPredicted RBP18.16■□□□□ 0.5
TSPAN4-204ENST00000397404 MSL3P1P0C860 447 aa18.16■□□□□ 0.5
TSPAN4-204ENST00000397404 CKMT1AP12532 417 aa18.16■□□□□ 0.5
TSPAN4-204ENST00000397404 ENGP17813 658 aa18.16■□□□□ 0.5
TSPAN4-204ENST00000397404 GRK6P43250 576 aa18.16■□□□□ 0.5
TSPAN4-204ENST00000397404 UFM1P61960 85 aa18.16■□□□□ 0.5
TSPAN4-204ENST00000397404 HEPACAMQ14CZ8 416 aa18.16■□□□□ 0.5
TSPAN4-204ENST00000397404 IRGCQ6NXR0 463 aa18.16■□□□□ 0.5
TSPAN4-204ENST00000397404 FBXO42Q6P3S6 717 aa18.16■□□□□ 0.5
TSPAN4-204ENST00000397404 ABHD13Q7L211 337 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms