RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 KLHL41O60662 606 aa12.69□□□□□ -0.38
SEC13-209ENST00000397117 PRAMEF4O60810 478 aa12.69□□□□□ -0.38
SEC13-209ENST00000397117 ATP6AP2O75787 350 aa12.69□□□□□ -0.38
SEC13-209ENST00000397117 FAM87AP0C7U9 286 aa12.69□□□□□ -0.38
SEC13-209ENST00000397117 SFTPCP11686 197 aa12.69□□□□□ -0.38
SEC13-209ENST00000397117 WT1P19544 449 aaPredicted RBP12.69□□□□□ -0.38
SEC13-209ENST00000397117 CXCR2P25025 360 aa12.69□□□□□ -0.38
SEC13-209ENST00000397117 CMPK1P30085 196 aa12.69□□□□□ -0.38
SEC13-209ENST00000397117 ETV5P41161 510 aa12.69□□□□□ -0.38
SEC13-209ENST00000397117 ABRAXAS2Q15018 415 aa12.69□□□□□ -0.38
SEC13-209ENST00000397117 TBR1Q16650 682 aa12.69□□□□□ -0.38
SEC13-209ENST00000397117 IMPG1Q17R60 797 aa12.69□□□□□ -0.38
SEC13-209ENST00000397117 LSM12Q3MHD2 195 aaKnown RBP12.69□□□□□ -0.38
SEC13-209ENST00000397117 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.69□□□□□ -0.38
SEC13-209ENST00000397117 PRAMEF9Q5VWM5 478 aa12.69□□□□□ -0.38
SEC13-209ENST00000397117 ARMC6Q6NXE6 501 aa12.69□□□□□ -0.38
SEC13-209ENST00000397117 MED27Q6P2C8 311 aa12.69□□□□□ -0.38
SEC13-209ENST00000397117 KLHL35Q6PF15 583 aa12.69□□□□□ -0.38
SEC13-209ENST00000397117 ADCK2Q7Z695 626 aa12.69□□□□□ -0.38
SEC13-209ENST00000397117 ZNF761Q86XN6 746 aaPredicted RBP12.69□□□□□ -0.38
SEC13-209ENST00000397117 DTX1Q86Y01 620 aa12.69□□□□□ -0.38
SEC13-209ENST00000397117 ADGRF3Q8IZF5 1079 aa12.69□□□□□ -0.38
SEC13-209ENST00000397117 KRT78Q8N1N4 520 aa12.69□□□□□ -0.38
SEC13-209ENST00000397117 OR2A1Q8NGT9 310 aa12.69□□□□□ -0.38
SEC13-209ENST00000397117 SELENOMQ8WWX9 145 aa12.69□□□□□ -0.38
SEC13-209ENST00000397117 TUBGCP3Q96CW5 907 aa12.69□□□□□ -0.38
SEC13-209ENST00000397117 MTFMTQ96DP5 389 aaKnown RBP12.69□□□□□ -0.38
SEC13-209ENST00000397117 MAELQ96JY0 434 aaKnown RBP12.69□□□□□ -0.38
SEC13-209ENST00000397117 ARHGAP9Q9BRR9 750 aa12.69□□□□□ -0.38
SEC13-209ENST00000397117 UCK1Q9HA47 277 aa12.69□□□□□ -0.38
SEC13-209ENST00000397117 WDR70Q9NW82 654 aa12.69□□□□□ -0.38
SEC13-209ENST00000397117 GEMIN8Q9NWZ8 242 aaKnown RBP12.69□□□□□ -0.38
SEC13-209ENST00000397117 SPHK1Q9NYA1 384 aa12.69□□□□□ -0.38
SEC13-209ENST00000397117 PISDQ9UG56 409 aa12.69□□□□□ -0.38
SEC13-209ENST00000397117 LOXL2Q9Y4K0 774 aa12.69□□□□□ -0.38
SEC13-209ENST00000397117 PCDHGA4Q9Y5G9 962 aa12.69□□□□□ -0.38
SEC13-209ENST00000397117 SDK2Q58EX2 2172 aa12.68□□□□□ -0.38
SEC13-209ENST00000397117 H7BY64 318 aa12.68□□□□□ -0.38
SEC13-209ENST00000397117 SLC28A1O00337 649 aa12.68□□□□□ -0.38
SEC13-209ENST00000397117 PPM1DO15297 605 aa12.68□□□□□ -0.38
SEC13-209ENST00000397117 PRAMEF10O60809 474 aa12.68□□□□□ -0.38
SEC13-209ENST00000397117 PDYNP01213 254 aa12.68□□□□□ -0.38
SEC13-209ENST00000397117 JMJD7P0C870 316 aa12.68□□□□□ -0.38
SEC13-209ENST00000397117 PCNAP12004 261 aa12.68□□□□□ -0.38
SEC13-209ENST00000397117 POLR2CP19387 275 aaPredicted RBP12.68□□□□□ -0.38
SEC13-209ENST00000397117 ITIH1P19827 911 aa12.68□□□□□ -0.38
SEC13-209ENST00000397117 NCF2P19878 526 aaPredicted RBP12.68□□□□□ -0.38
SEC13-209ENST00000397117 CD22P20273 847 aa12.68□□□□□ -0.38
SEC13-209ENST00000397117 PPM1FP49593 454 aaPredicted RBP12.68□□□□□ -0.38
SEC13-209ENST00000397117 HTR6P50406 440 aa12.68□□□□□ -0.38
SEC13-209ENST00000397117 MANEAQ5SRI9 462 aa12.68□□□□□ -0.38
SEC13-209ENST00000397117 METTL21CQ5VZV1 264 aa12.68□□□□□ -0.38
SEC13-209ENST00000397117 RNF165Q6ZSG1 346 aa12.68□□□□□ -0.38
SEC13-209ENST00000397117 TRPM8Q7Z2W7 1104 aa12.68□□□□□ -0.38
SEC13-209ENST00000397117 OOSP2Q86WS3 158 aa12.68□□□□□ -0.38
SEC13-209ENST00000397117 C17orf82Q86X59 251 aaPredicted RBP12.68□□□□□ -0.38
SEC13-209ENST00000397117 ZFAND4Q86XD8 727 aa12.68□□□□□ -0.38
SEC13-209ENST00000397117 ABHD11Q8NFV4 315 aa12.68□□□□□ -0.38
SEC13-209ENST00000397117 OR2L3Q8NG85 312 aa12.68□□□□□ -0.38
SEC13-209ENST00000397117 USP7Q93009 1102 aa12.68□□□□□ -0.38
SEC13-209ENST00000397117 C3orf30Q96M34 536 aa12.68□□□□□ -0.38
SEC13-209ENST00000397117 PRAP1Q96NZ9 151 aa12.68□□□□□ -0.38
SEC13-209ENST00000397117 HBEGFQ99075 208 aa12.68□□□□□ -0.38
SEC13-209ENST00000397117 AIF1LQ9BQI0 150 aa12.68□□□□□ -0.38
SEC13-209ENST00000397117 TBC1D10AQ9BXI6 508 aa12.68□□□□□ -0.38
SEC13-209ENST00000397117 AKTIPQ9H8T0 292 aa12.68□□□□□ -0.38
SEC13-209ENST00000397117 CUEDC1Q9NWM3 386 aaPredicted RBP12.68□□□□□ -0.38
SEC13-209ENST00000397117 HRASLS2Q9NWW9 162 aa12.68□□□□□ -0.38
SEC13-209ENST00000397117 ZFP69BQ9UJL9 534 aa12.68□□□□□ -0.38
SEC13-209ENST00000397117 COL12A1Q99715 3063 aa12.67□□□□□ -0.38
SEC13-209ENST00000397117 NBASA2RRP1 2371 aa12.67□□□□□ -0.38
SEC13-209ENST00000397117 C2orf74A8MZ97 194 aa12.67□□□□□ -0.38
SEC13-209ENST00000397117 PRICKLE3O43900 615 aaPredicted RBP12.67□□□□□ -0.38
SEC13-209ENST00000397117 UBXN7O94888 489 aa12.67□□□□□ -0.38
SEC13-209ENST00000397117 SERPINA6P08185 405 aa12.67□□□□□ -0.38
SEC13-209ENST00000397117 PNLIPP16233 465 aa12.67□□□□□ -0.38
SEC13-209ENST00000397117 AMD1P17707 334 aa12.67□□□□□ -0.38
SEC13-209ENST00000397117 HRH2P25021 359 aa12.67□□□□□ -0.38
SEC13-209ENST00000397117 PEBP1P30086 187 aaKnown RBP12.67□□□□□ -0.38
SEC13-209ENST00000397117 GRK3P35626 688 aa12.67□□□□□ -0.38
SEC13-209ENST00000397117 NEK2P51955 445 aa12.67□□□□□ -0.38
SEC13-209ENST00000397117 YBX1P67809 324 aaKnown RBP12.67□□□□□ -0.38
SEC13-209ENST00000397117 PHEXP78562 749 aa12.67□□□□□ -0.38
SEC13-209ENST00000397117 MEF2AQ02078 507 aaPredicted RBP12.67□□□□□ -0.38
SEC13-209ENST00000397117 ZNF33BQ06732 778 aa12.67□□□□□ -0.38
SEC13-209ENST00000397117 TUBB3Q13509 450 aa12.67□□□□□ -0.38
SEC13-209ENST00000397117 DDX39BQ13838 428 aaKnown RBP12.67□□□□□ -0.38
SEC13-209ENST00000397117 E2F2Q14209 437 aa12.67□□□□□ -0.38
SEC13-209ENST00000397117 ATP6AP1LQ52LC2 224 aa12.67□□□□□ -0.38
SEC13-209ENST00000397117 XKR7Q5GH72 579 aa12.67□□□□□ -0.38
SEC13-209ENST00000397117 SPDYAQ5MJ70 313 aa12.67□□□□□ -0.38
SEC13-209ENST00000397117 C10orf62Q5T681 223 aaPredicted RBP12.67□□□□□ -0.38
SEC13-209ENST00000397117 VASH2Q86V25 355 aa12.67□□□□□ -0.38
SEC13-209ENST00000397117 TBC1D19Q8N5T2 526 aa12.67□□□□□ -0.38
SEC13-209ENST00000397117 FARSBQ9NSD9 589 aaKnown RBP12.67□□□□□ -0.38
SEC13-209ENST00000397117 ACTR10Q9NZ32 417 aa12.67□□□□□ -0.38
SEC13-209ENST00000397117 FOXJ2Q9P0K8 574 aa12.67□□□□□ -0.38
SEC13-209ENST00000397117 LRRK2Q5S007 2527 aa12.67□□□□□ -0.38
SEC13-209ENST00000397117 OR5K3A6NET4 321 aa12.66□□□□□ -0.38
SEC13-209ENST00000397117 LILRA5A6NI73 299 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms