RNA–Protein interactions for RNA: ENST00000397013.2

NUP98-206, Transcript of nucleoporin 98, humanhuman

TSL 5

Gene NUP98, Length 939 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-206ENST00000397013 CEP128Q6ZU80 1094 aa7.55□□□□□ -1.2
NUP98-206ENST00000397013 CPEB2Q7Z5Q1 589 aaKnown RBP7.55□□□□□ -1.2
NUP98-206ENST00000397013 ANKRD37Q7Z713 158 aa7.55□□□□□ -1.2
NUP98-206ENST00000397013 ZNF227Q86WZ6 799 aa7.55□□□□□ -1.2
NUP98-206ENST00000397013 KIF2BQ8N4N8 673 aa7.55□□□□□ -1.2
NUP98-206ENST00000397013 CPSF7Q8N684 471 aaKnown RBP7.55□□□□□ -1.2
NUP98-206ENST00000397013 SLC35B2Q8TB61 432 aa7.55□□□□□ -1.2
NUP98-206ENST00000397013 HMGCLL1Q8TB92 370 aa7.55□□□□□ -1.2
NUP98-206ENST00000397013 THAP3Q8WTV1 239 aaPredicted RBP7.55□□□□□ -1.2
NUP98-206ENST00000397013 CHTF18Q8WVB6 975 aa7.55□□□□□ -1.2
NUP98-206ENST00000397013 GAL3ST3Q96A11 431 aa7.55□□□□□ -1.2
NUP98-206ENST00000397013 SDCCAG3Q96C92 435 aa7.55□□□□□ -1.2
NUP98-206ENST00000397013 C14orf79Q96F83 325 aa7.55□□□□□ -1.2
NUP98-206ENST00000397013 SCMH1Q96GD3 660 aa7.55□□□□□ -1.2
NUP98-206ENST00000397013 EAF1Q96JC9 268 aaPredicted RBP7.55□□□□□ -1.2
NUP98-206ENST00000397013 MAGED4Q96JG8 741 aa7.55□□□□□ -1.2
NUP98-206ENST00000397013 DMRTA2Q96SC8 542 aa7.55□□□□□ -1.2
NUP98-206ENST00000397013 PKP4Q99569 1192 aa7.55□□□□□ -1.2
NUP98-206ENST00000397013 TUBB6Q9BUF5 446 aa7.55□□□□□ -1.2
NUP98-206ENST00000397013 TMPRSS13Q9BYE2 586 aa7.55□□□□□ -1.2
NUP98-206ENST00000397013 LIME1Q9H400 295 aa7.55□□□□□ -1.2
NUP98-206ENST00000397013 KCNK13Q9HB14 408 aa7.55□□□□□ -1.2
NUP98-206ENST00000397013 MRPS30Q9NP92 439 aaKnown RBP7.55□□□□□ -1.2
NUP98-206ENST00000397013 MKKSQ9NPJ1 570 aaPredicted RBP7.55□□□□□ -1.2
NUP98-206ENST00000397013 EFR3BQ9Y2G0 817 aa7.55□□□□□ -1.2
NUP98-206ENST00000397013 SBDSQ9Y3A5 250 aaKnown RBP eCLIP7.55□□□□□ -1.2
NUP98-206ENST00000397013 REXO2Q9Y3B8 237 aaKnown RBP7.55□□□□□ -1.2
NUP98-206ENST00000397013 SPG11Q96JI7 2443 aa7.54□□□□□ -1.2
NUP98-206ENST00000397013 PCM1Q15154 2024 aa7.54□□□□□ -1.2
NUP98-206ENST00000397013 GRID2IPA4D2P6 1211 aa7.54□□□□□ -1.2
NUP98-206ENST00000397013 ASPDHA6ND91 283 aa7.54□□□□□ -1.2
NUP98-206ENST00000397013 H7BY64 318 aa7.54□□□□□ -1.2
NUP98-206ENST00000397013 PRMT5O14744 637 aaPredicted RBP7.54□□□□□ -1.2
NUP98-206ENST00000397013 CD3EAPO15446 510 aaKnown RBP7.54□□□□□ -1.2
NUP98-206ENST00000397013 TTI1O43156 1089 aa7.54□□□□□ -1.2
NUP98-206ENST00000397013 CDC123O75794 336 aaPredicted RBP7.54□□□□□ -1.2
NUP98-206ENST00000397013 TJP3O95049 919 aa7.54□□□□□ -1.2
NUP98-206ENST00000397013 RPN2P04844 631 aa7.54□□□□□ -1.2
NUP98-206ENST00000397013 SP1P08047 785 aa7.54□□□□□ -1.2
NUP98-206ENST00000397013 ANXA5P08758 320 aa7.54□□□□□ -1.2
NUP98-206ENST00000397013 CAPN3P20807 821 aa7.54□□□□□ -1.2
NUP98-206ENST00000397013 ADRA1DP25100 572 aa7.54□□□□□ -1.2
NUP98-206ENST00000397013 NMBRP28336 390 aa7.54□□□□□ -1.2
NUP98-206ENST00000397013 CMPK1P30085 196 aa7.54□□□□□ -1.2
NUP98-206ENST00000397013 EIF3BP55884 814 aaKnown RBP7.54□□□□□ -1.2
NUP98-206ENST00000397013 SESN2P58004 480 aaPredicted RBP7.54□□□□□ -1.2
NUP98-206ENST00000397013 CDH17Q12864 832 aa7.54□□□□□ -1.2
NUP98-206ENST00000397013 KLF1Q13351 362 aaPredicted RBP7.54□□□□□ -1.2
NUP98-206ENST00000397013 SNTB1Q13884 538 aaKnown RBP7.54□□□□□ -1.2
NUP98-206ENST00000397013 TRIM14Q14142 442 aa7.54□□□□□ -1.2
NUP98-206ENST00000397013 KCNJ11Q14654 390 aa7.54□□□□□ -1.2
NUP98-206ENST00000397013 KRTCAP3Q53RY4 240 aa7.54□□□□□ -1.2
NUP98-206ENST00000397013 ZNF425Q6IV72 752 aa7.54□□□□□ -1.2
NUP98-206ENST00000397013 TTC23LQ6PF05 361 aa7.54□□□□□ -1.2
NUP98-206ENST00000397013 VN1R4Q7Z5H5 301 aa7.54□□□□□ -1.2
NUP98-206ENST00000397013 PDSS2Q86YH6 399 aa7.54□□□□□ -1.2
NUP98-206ENST00000397013 CCDC71Q8IV32 467 aaPredicted RBP7.54□□□□□ -1.2
NUP98-206ENST00000397013 TC2NQ8N9U0 490 aa7.54□□□□□ -1.2
NUP98-206ENST00000397013 OR5T3Q8NGG3 340 aa7.54□□□□□ -1.2
NUP98-206ENST00000397013 OR9A1PQ8NGU1 263 aa7.54□□□□□ -1.2
NUP98-206ENST00000397013 TSLPQ969D9 159 aa7.54□□□□□ -1.2
NUP98-206ENST00000397013 ZNF354BQ96LW1 612 aa7.54□□□□□ -1.2
NUP98-206ENST00000397013 PRAP1Q96NZ9 151 aa7.54□□□□□ -1.2
NUP98-206ENST00000397013 BIRC8Q96P09 236 aa7.54□□□□□ -1.2
NUP98-206ENST00000397013 TREX2Q9BQ50 279 aaPredicted RBP7.54□□□□□ -1.2
NUP98-206ENST00000397013 FERMT1Q9BQL6 677 aa7.54□□□□□ -1.2
NUP98-206ENST00000397013 UTP23Q9BRU9 249 aaKnown RBP7.54□□□□□ -1.2
NUP98-206ENST00000397013 DRC3Q9H069 523 aa7.54□□□□□ -1.2
NUP98-206ENST00000397013 CDCP1Q9H5V8 836 aa7.54□□□□□ -1.2
NUP98-206ENST00000397013 CATSPERZQ9NTU4 200 aa7.54□□□□□ -1.2
NUP98-206ENST00000397013 C14orf105Q9NVL8 296 aa7.54□□□□□ -1.2
NUP98-206ENST00000397013 TAC3Q9UHF0 121 aa7.54□□□□□ -1.2
NUP98-206ENST00000397013 PCYOX1Q9UHG3 505 aa7.54□□□□□ -1.2
NUP98-206ENST00000397013 PPT2Q9UMR5 302 aa7.54□□□□□ -1.2
NUP98-206ENST00000397013 CDC14AQ9UNH5 594 aa7.54□□□□□ -1.2
NUP98-206ENST00000397013 SH2B3Q9UQQ2 575 aa7.54□□□□□ -1.2
NUP98-206ENST00000397013 TCAF1Q9Y4C2 921 aa7.54□□□□□ -1.2
NUP98-206ENST00000397013 A0A1B0GTH9 108 aa7.53□□□□□ -1.2
NUP98-206ENST00000397013 ZNF860A6NHJ4 632 aa7.53□□□□□ -1.2
NUP98-206ENST00000397013 FAM90A27PA6NNH2 459 aa7.53□□□□□ -1.2
NUP98-206ENST00000397013 GABRR3A8MPY1 467 aa7.53□□□□□ -1.2
NUP98-206ENST00000397013 LCMT2O60294 686 aaKnown RBP7.53□□□□□ -1.2
NUP98-206ENST00000397013 PDE9AO76083 593 aa7.53□□□□□ -1.2
NUP98-206ENST00000397013 SUN1O94901 812 aa7.53□□□□□ -1.2
NUP98-206ENST00000397013 MATN4O95460 622 aa7.53□□□□□ -1.2
NUP98-206ENST00000397013 BPNT1O95861 308 aa7.53□□□□□ -1.2
NUP98-206ENST00000397013 ERGP11308 486 aa7.53□□□□□ -1.2
NUP98-206ENST00000397013 ICAM2P13598 275 aa7.53□□□□□ -1.2
NUP98-206ENST00000397013 ABOP16442 354 aa7.53□□□□□ -1.2
NUP98-206ENST00000397013 IL1RNP18510 177 aa7.53□□□□□ -1.2
NUP98-206ENST00000397013 EEF1DP29692 281 aaKnown RBP7.53□□□□□ -1.2
NUP98-206ENST00000397013 DNAJA1P31689 397 aaKnown RBP7.53□□□□□ -1.2
NUP98-206ENST00000397013 RPA3P35244 121 aaPredicted RBP7.53□□□□□ -1.2
NUP98-206ENST00000397013 XCR1P46094 333 aa7.53□□□□□ -1.2
NUP98-206ENST00000397013 IST1P53990 364 aa7.53□□□□□ -1.2
NUP98-206ENST00000397013 NAP1L1P55209 391 aaKnown RBP7.53□□□□□ -1.2
NUP98-206ENST00000397013 PRAMEP78395 509 aa7.53□□□□□ -1.2
NUP98-206ENST00000397013 OC90Q02509 493 aaPredicted RBP7.53□□□□□ -1.2
NUP98-206ENST00000397013 PRDX1Q06830 199 aaKnown RBP7.53□□□□□ -1.2
NUP98-206ENST00000397013 TFF3Q07654 80 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms