RNA–Protein interactions for RNA: ENST00000396172.5

DDX39B-202, Transcript of DExD-box helicase 39B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39B, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-202ENST00000396172 PIP5K1BO14986 540 aa9.44□□□□□ -0.9
DDX39B-202ENST00000396172 ZSCAN9O15535 394 aaPredicted RBP9.44□□□□□ -0.9
DDX39B-202ENST00000396172 RSL1D1O76021 490 aaKnown RBP9.44□□□□□ -0.9
DDX39B-202ENST00000396172 SEMA3DO95025 777 aa9.44□□□□□ -0.9
DDX39B-202ENST00000396172 PDYNP01213 254 aa9.44□□□□□ -0.9
DDX39B-202ENST00000396172 SERPINA6P08185 405 aa9.44□□□□□ -0.9
DDX39B-202ENST00000396172 CEACAM1P13688 526 aa9.44□□□□□ -0.9
DDX39B-202ENST00000396172 PCSK2P16519 638 aa9.44□□□□□ -0.9
DDX39B-202ENST00000396172 PTX3P26022 381 aaPredicted RBP9.44□□□□□ -0.9
DDX39B-202ENST00000396172 CSTF2P33240 577 aaKnown RBP eCLIP9.44□□□□□ -0.9
DDX39B-202ENST00000396172 BCL6P41182 706 aa9.44□□□□□ -0.9
DDX39B-202ENST00000396172 SKP1P63208 163 aa9.44□□□□□ -0.9
DDX39B-202ENST00000396172 YBX1P67809 324 aaKnown RBP9.44□□□□□ -0.9
DDX39B-202ENST00000396172 BTKQ06187 659 aa9.44□□□□□ -0.9
DDX39B-202ENST00000396172 CYP4F3Q08477 520 aa9.44□□□□□ -0.9
DDX39B-202ENST00000396172 SMU1Q2TAY7 513 aa9.44□□□□□ -0.9
DDX39B-202ENST00000396172 C11orf91Q3C1V1 193 aa9.44□□□□□ -0.9
DDX39B-202ENST00000396172 UGT3A2Q3SY77 523 aa9.44□□□□□ -0.9
DDX39B-202ENST00000396172 TMEM35AQ53FP2 167 aa9.44□□□□□ -0.9
DDX39B-202ENST00000396172 PHF19Q5T6S3 580 aa9.44□□□□□ -0.9
DDX39B-202ENST00000396172 NIPAL1Q6NVV3 410 aa9.44□□□□□ -0.9
DDX39B-202ENST00000396172 CHSY3Q70JA7 882 aa9.44□□□□□ -0.9
DDX39B-202ENST00000396172 TRIM46Q7Z4K8 759 aa9.44□□□□□ -0.9
DDX39B-202ENST00000396172 ARHGAP22Q7Z5H3 698 aa9.44□□□□□ -0.9
DDX39B-202ENST00000396172 ASPGQ86U10 573 aa9.44□□□□□ -0.9
DDX39B-202ENST00000396172 SLITRK4Q8IW52 837 aa9.44□□□□□ -0.9
DDX39B-202ENST00000396172 FAM20CQ8IXL6 584 aa9.44□□□□□ -0.9
DDX39B-202ENST00000396172 OR8K5Q8NH50 307 aa9.44□□□□□ -0.9
DDX39B-202ENST00000396172 NT5CQ8TCD5 201 aa9.44□□□□□ -0.9
DDX39B-202ENST00000396172 PPP3R2Q96LZ3 170 aa9.44□□□□□ -0.9
DDX39B-202ENST00000396172 TNFRSF12AQ9NP84 129 aa9.44□□□□□ -0.9
DDX39B-202ENST00000396172 TXLNGQ9NUQ3 528 aa9.44□□□□□ -0.9
DDX39B-202ENST00000396172 AHSPQ9NZD4 102 aa9.44□□□□□ -0.9
DDX39B-202ENST00000396172 CNOT1A5YKK6 2376 aaKnown RBP9.44□□□□□ -0.9
DDX39B-202ENST00000396172 PTPRZ1P23471 2315 aaPredicted RBP9.44□□□□□ -0.9
DDX39B-202ENST00000396172 A0A088AWK7 358 aa9.44□□□□□ -0.9
DDX39B-202ENST00000396172 A0A0J9YVX5 310 aa9.44□□□□□ -0.9
DDX39B-202ENST00000396172 NPIPB8E9PQR5 432 aa9.44□□□□□ -0.9
DDX39B-202ENST00000396172 NDUFS4O43181 175 aa9.44□□□□□ -0.9
DDX39B-202ENST00000396172 UNC5CO95185 931 aa9.44□□□□□ -0.9
DDX39B-202ENST00000396172 ZNF10P21506 573 aaPredicted RBP9.44□□□□□ -0.9
DDX39B-202ENST00000396172 PRPH2P23942 346 aa9.44□□□□□ -0.9
DDX39B-202ENST00000396172 SEPHS1P49903 392 aa9.44□□□□□ -0.9
DDX39B-202ENST00000396172 AQP5P55064 265 aa9.44□□□□□ -0.9
DDX39B-202ENST00000396172 CUL3Q13618 768 aa9.44□□□□□ -0.9
DDX39B-202ENST00000396172 ABRAXAS2Q15018 415 aa9.44□□□□□ -0.9
DDX39B-202ENST00000396172 NR6A1Q15406 480 aa9.44□□□□□ -0.9
DDX39B-202ENST00000396172 ATP6AP1LQ52LC2 224 aa9.44□□□□□ -0.9
DDX39B-202ENST00000396172 SPIN4Q56A73 249 aa9.44□□□□□ -0.9
DDX39B-202ENST00000396172 XKR7Q5GH72 579 aa9.44□□□□□ -0.9
DDX39B-202ENST00000396172 ATG14Q6ZNE5 492 aa9.44□□□□□ -0.9
DDX39B-202ENST00000396172 BPHLQ86WA6 291 aaPredicted RBP9.44□□□□□ -0.9
DDX39B-202ENST00000396172 DNAJC22Q8N4W6 341 aa9.44□□□□□ -0.9
DDX39B-202ENST00000396172 ANKRD53Q8N9V6 530 aa9.44□□□□□ -0.9
DDX39B-202ENST00000396172 TTC29Q8NA56 475 aaPredicted RBP9.44□□□□□ -0.9
DDX39B-202ENST00000396172 AGBL5Q8NDL9 886 aa9.44□□□□□ -0.9
DDX39B-202ENST00000396172 ZNF740Q8NDX6 193 aa9.44□□□□□ -0.9
DDX39B-202ENST00000396172 PPM1MQ96MI6 270 aa9.44□□□□□ -0.9
DDX39B-202ENST00000396172 OR2A5Q96R48 311 aa9.44□□□□□ -0.9
DDX39B-202ENST00000396172 MTERF1Q99551 399 aaKnown RBP9.44□□□□□ -0.9
DDX39B-202ENST00000396172 MS4A8Q9BY19 250 aa9.44□□□□□ -0.9
DDX39B-202ENST00000396172 NUF2Q9BZD4 464 aa9.44□□□□□ -0.9
DDX39B-202ENST00000396172 KLHL25Q9H0H3 589 aa9.44□□□□□ -0.9
DDX39B-202ENST00000396172 TMEM9Q9P0T7 183 aa9.44□□□□□ -0.9
DDX39B-202ENST00000396172 KLHL20Q9Y2M5 609 aa9.44□□□□□ -0.9
DDX39B-202ENST00000396172 TMED5Q9Y3A6 229 aa9.44□□□□□ -0.9
DDX39B-202ENST00000396172 FER1L5A0AVI2 2057 aa9.43□□□□□ -0.9
DDX39B-202ENST00000396172 A0A0G2JND7 137 aa9.43□□□□□ -0.9
DDX39B-202ENST00000396172 MAGEB17A8MXT2 336 aa9.43□□□□□ -0.9
DDX39B-202ENST00000396172 CTSVO60911 334 aa9.43□□□□□ -0.9
DDX39B-202ENST00000396172 HOXB3P14651 431 aaPredicted RBP9.43□□□□□ -0.9
DDX39B-202ENST00000396172 MAPK1P28482 360 aa9.43□□□□□ -0.9
DDX39B-202ENST00000396172 SERPINB3P29508 390 aa9.43□□□□□ -0.9
DDX39B-202ENST00000396172 TSFMP43897 325 aaKnown RBP9.43□□□□□ -0.9
DDX39B-202ENST00000396172 HTR6P50406 440 aa9.43□□□□□ -0.9
DDX39B-202ENST00000396172 RAP1GDS1P52306 607 aa9.43□□□□□ -0.9
DDX39B-202ENST00000396172 ARFIP2P53365 341 aa9.43□□□□□ -0.9
DDX39B-202ENST00000396172 ZFP36L1Q07352 338 aaKnown RBP9.43□□□□□ -0.9
DDX39B-202ENST00000396172 EIF3IQ13347 325 aaKnown RBP9.43□□□□□ -0.9
DDX39B-202ENST00000396172 BLMHQ13867 455 aa9.43□□□□□ -0.9
DDX39B-202ENST00000396172 ZIC1Q15915 447 aa9.43□□□□□ -0.9
DDX39B-202ENST00000396172 NDUFA9Q16795 377 aa9.43□□□□□ -0.9
DDX39B-202ENST00000396172 CCDC157Q569K6 752 aa9.43□□□□□ -0.9
DDX39B-202ENST00000396172 SGO1Q5FBB7 561 aa9.43□□□□□ -0.9
DDX39B-202ENST00000396172 TCHHL1Q5QJ38 904 aaPredicted RBP9.43□□□□□ -0.9
DDX39B-202ENST00000396172 YOD1Q5VVQ6 348 aaPredicted RBP9.43□□□□□ -0.9
DDX39B-202ENST00000396172 TRIM40Q6P9F5 258 aa9.43□□□□□ -0.9
DDX39B-202ENST00000396172 EPGNQ6UW88 154 aa9.43□□□□□ -0.9
DDX39B-202ENST00000396172 ABHD13Q7L211 337 aa9.43□□□□□ -0.9
DDX39B-202ENST00000396172 PAGE2Q7Z2X7 111 aa9.43□□□□□ -0.9
DDX39B-202ENST00000396172 GPR135Q8IZ08 494 aa9.43□□□□□ -0.9
DDX39B-202ENST00000396172 CEP70Q8NHQ1 597 aa9.43□□□□□ -0.9
DDX39B-202ENST00000396172 ACTRT2Q8TDY3 377 aa9.43□□□□□ -0.9
DDX39B-202ENST00000396172 SLC13A3Q8WWT9 602 aa9.43□□□□□ -0.9
DDX39B-202ENST00000396172 GAL3ST3Q96A11 431 aa9.43□□□□□ -0.9
DDX39B-202ENST00000396172 TUBGCP3Q96CW5 907 aa9.43□□□□□ -0.9
DDX39B-202ENST00000396172 MAELQ96JY0 434 aaKnown RBP9.43□□□□□ -0.9
DDX39B-202ENST00000396172 CCDC28BQ9BUN5 200 aa9.43□□□□□ -0.9
DDX39B-202ENST00000396172 ROGDIQ9GZN7 287 aa9.43□□□□□ -0.9
DDX39B-202ENST00000396172 IRAK4Q9NWZ3 460 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms