RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 HCN2Q9UL51 889 aa16.13■□□□□ 0.17
NUP50-202ENST00000396096 DNMT3AQ9Y6K1 912 aaPredicted RBP16.13■□□□□ 0.17
NUP50-202ENST00000396096 TBC1D3BA6NDS4 549 aa16.12■□□□□ 0.17
NUP50-202ENST00000396096 CA3P07451 260 aa16.12■□□□□ 0.17
NUP50-202ENST00000396096 EFNA1P20827 205 aaPredicted RBP16.12■□□□□ 0.17
NUP50-202ENST00000396096 ARHGDIAP52565 204 aa16.12■□□□□ 0.17
NUP50-202ENST00000396096 TPD52P55327 224 aaPredicted RBP16.12■□□□□ 0.17
NUP50-202ENST00000396096 ITGA1P56199 1179 aa16.12■□□□□ 0.17
NUP50-202ENST00000396096 VLDLRP98155 873 aa16.12■□□□□ 0.17
NUP50-202ENST00000396096 TUBA3CQ13748 450 aa16.12■□□□□ 0.17
NUP50-202ENST00000396096 TEAD4Q15561 434 aa16.12■□□□□ 0.17
NUP50-202ENST00000396096 CTU2Q2VPK5 515 aaKnown RBP16.12■□□□□ 0.17
NUP50-202ENST00000396096 IQCCQ4KMZ1 466 aa16.12■□□□□ 0.17
NUP50-202ENST00000396096 FAM46CQ5VWP2 391 aa16.12■□□□□ 0.17
NUP50-202ENST00000396096 KDM4DQ6B0I6 523 aa16.12■□□□□ 0.17
NUP50-202ENST00000396096 PNCKQ6P2M8 343 aa16.12■□□□□ 0.17
NUP50-202ENST00000396096 DHRS4L2Q6PKH6 230 aa16.12■□□□□ 0.17
NUP50-202ENST00000396096 FAM129CQ86XR2 697 aa16.12■□□□□ 0.17
NUP50-202ENST00000396096 DCUN1D3Q8IWE4 304 aa16.12■□□□□ 0.17
NUP50-202ENST00000396096 PIK3C3Q8NEB9 887 aa16.12■□□□□ 0.17
NUP50-202ENST00000396096 OR13F1Q8NGS4 319 aa16.12■□□□□ 0.17
NUP50-202ENST00000396096 C16orf78Q8WTQ4 265 aa16.12■□□□□ 0.17
NUP50-202ENST00000396096 SH3BP4Q9P0V3 963 aa16.12■□□□□ 0.17
NUP50-202ENST00000396096 EBF1Q9UH73 591 aa16.12■□□□□ 0.17
NUP50-202ENST00000396096 CDC14AQ9UNH5 594 aa16.12■□□□□ 0.17
NUP50-202ENST00000396096 PCYT1BQ9Y5K3 369 aaPredicted RBP16.12■□□□□ 0.17
NUP50-202ENST00000396096 U3KQV3 271 aa16.12■□□□□ 0.17
NUP50-202ENST00000396096 MKI67P46013 3256 aaKnown RBP16.12■□□□□ 0.17
NUP50-202ENST00000396096 B4GAT1O43505 415 aa16.12■□□□□ 0.17
NUP50-202ENST00000396096 UGT2B11O75310 529 aa16.12■□□□□ 0.17
NUP50-202ENST00000396096 IL7RP16871 459 aa16.12■□□□□ 0.17
NUP50-202ENST00000396096 IGFBP5P24593 272 aa16.12■□□□□ 0.17
NUP50-202ENST00000396096 GSTM2P28161 218 aa16.12■□□□□ 0.17
NUP50-202ENST00000396096 MVDP53602 400 aa16.12■□□□□ 0.17
NUP50-202ENST00000396096 CRYBA2P53672 197 aa16.12■□□□□ 0.17
NUP50-202ENST00000396096 NUP107P57740 925 aa16.12■□□□□ 0.17
NUP50-202ENST00000396096 TSTA3Q13630 321 aaPredicted RBP16.12■□□□□ 0.17
NUP50-202ENST00000396096 ARHGAP19Q14CB8 494 aa16.12■□□□□ 0.17
NUP50-202ENST00000396096 LAIR2Q6ISS4 152 aa16.12■□□□□ 0.17
NUP50-202ENST00000396096 IKBIPQ70UQ0 350 aa16.12■□□□□ 0.17
NUP50-202ENST00000396096 CEP68Q76N32 757 aa16.12■□□□□ 0.17
NUP50-202ENST00000396096 CHST15Q7LFX5 561 aaPredicted RBP16.12■□□□□ 0.17
NUP50-202ENST00000396096 VTCN1Q7Z7D3 282 aa16.12■□□□□ 0.17
NUP50-202ENST00000396096 CYP4Z1Q86W10 505 aa16.12■□□□□ 0.17
NUP50-202ENST00000396096 AMZ2Q86W34 360 aa16.12■□□□□ 0.17
NUP50-202ENST00000396096 C11orf65Q8NCR3 313 aa16.12■□□□□ 0.17
NUP50-202ENST00000396096 WDR48Q8TAF3 677 aa16.12■□□□□ 0.17
NUP50-202ENST00000396096 ZNF566Q969W8 418 aa16.12■□□□□ 0.17
NUP50-202ENST00000396096 LTB4R2Q9NPC1 389 aa16.12■□□□□ 0.17
NUP50-202ENST00000396096 BAG5Q9UL15 447 aa16.12■□□□□ 0.17
NUP50-202ENST00000396096 ASF1AQ9Y294 204 aa16.12■□□□□ 0.17
NUP50-202ENST00000396096 TMEM98Q9Y2Y6 226 aa16.12■□□□□ 0.17
NUP50-202ENST00000396096 HSPE1-MOB4S4R3N1 261 aa16.12■□□□□ 0.17
NUP50-202ENST00000396096 GPR37L1O60883 481 aa16.11■□□□□ 0.17
NUP50-202ENST00000396096 SEC14L2O76054 403 aa16.11■□□□□ 0.17
NUP50-202ENST00000396096 TGFB1P01137 390 aa16.11■□□□□ 0.17
NUP50-202ENST00000396096 EPHX1P07099 455 aa16.11■□□□□ 0.17
NUP50-202ENST00000396096 NUDT7P0C024 238 aa16.11■□□□□ 0.17
NUP50-202ENST00000396096 EEF1B2P24534 225 aaKnown RBP16.11■□□□□ 0.17
NUP50-202ENST00000396096 PTX3P26022 381 aaPredicted RBP16.11■□□□□ 0.17
NUP50-202ENST00000396096 HSD17B2P37059 387 aa16.11■□□□□ 0.17
NUP50-202ENST00000396096 FCHO2Q0JRZ9 810 aa16.11■□□□□ 0.17
NUP50-202ENST00000396096 AGERQ15109 404 aa16.11■□□□□ 0.17
NUP50-202ENST00000396096 MEP1AQ16819 746 aa16.11■□□□□ 0.17
NUP50-202ENST00000396096 XAF1Q6GPH4 301 aa16.11■□□□□ 0.17
NUP50-202ENST00000396096 VN1R5Q7Z5H4 357 aa16.11■□□□□ 0.17
NUP50-202ENST00000396096 LRRTM4Q86VH4 590 aa16.11■□□□□ 0.17
NUP50-202ENST00000396096 HEATR4Q86WZ0 1026 aa16.11■□□□□ 0.17
NUP50-202ENST00000396096 C7orf61Q8IZ16 206 aa16.11■□□□□ 0.17
NUP50-202ENST00000396096 KRT78Q8N1N4 520 aa16.11■□□□□ 0.17
NUP50-202ENST00000396096 LMNTD1Q8N9Z9 388 aa16.11■□□□□ 0.17
NUP50-202ENST00000396096 C7orf34Q96L11 122 aa16.11■□□□□ 0.17
NUP50-202ENST00000396096 ADNPQ9H2P0 1102 aa16.11■□□□□ 0.17
NUP50-202ENST00000396096 OR51B5Q9H339 312 aa16.11■□□□□ 0.17
NUP50-202ENST00000396096 TRIT1Q9H3H1 467 aaKnown RBP16.11■□□□□ 0.17
NUP50-202ENST00000396096 LIN28AQ9H9Z2 209 aaKnown RBP16.11■□□□□ 0.17
NUP50-202ENST00000396096 PELI2Q9HAT8 420 aa16.11■□□□□ 0.17
NUP50-202ENST00000396096 NAALAD2Q9Y3Q0 740 aa16.11■□□□□ 0.17
NUP50-202ENST00000396096 hCG_2039718K7EN88 272 aa16.1■□□□□ 0.17
NUP50-202ENST00000396096 BCKDKO14874 412 aa16.1■□□□□ 0.17
NUP50-202ENST00000396096 TNFRSF21O75509 655 aa16.1■□□□□ 0.17
NUP50-202ENST00000396096 CCDC159P0C7I6 412 aa16.1■□□□□ 0.17
NUP50-202ENST00000396096 CDK4P11802 303 aa16.1■□□□□ 0.17
NUP50-202ENST00000396096 GJA4P35212 333 aa16.1■□□□□ 0.17
NUP50-202ENST00000396096 DRD3P35462 400 aa16.1■□□□□ 0.17
NUP50-202ENST00000396096 EIF2DP41214 584 aaKnown RBP16.1■□□□□ 0.17
NUP50-202ENST00000396096 RXRGP48443 463 aa16.1■□□□□ 0.17
NUP50-202ENST00000396096 DAPP51397 102 aa16.1■□□□□ 0.17
NUP50-202ENST00000396096 HBA1P69905 142 aa16.1■□□□□ 0.17
NUP50-202ENST00000396096 KCNJ10P78508 379 aa16.1■□□□□ 0.17
NUP50-202ENST00000396096 CDK3Q00526 305 aa16.1■□□□□ 0.17
NUP50-202ENST00000396096 RBBP4Q09028 425 aa16.1■□□□□ 0.17
NUP50-202ENST00000396096 RUNX3Q13761 415 aa16.1■□□□□ 0.17
NUP50-202ENST00000396096 KEAP1Q14145 624 aa16.1■□□□□ 0.17
NUP50-202ENST00000396096 ELOAQ14241 798 aaKnown RBP16.1■□□□□ 0.17
NUP50-202ENST00000396096 NEDD8Q15843 81 aa16.1■□□□□ 0.17
NUP50-202ENST00000396096 C11orf91Q3C1V1 193 aa16.1■□□□□ 0.17
NUP50-202ENST00000396096 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.1■□□□□ 0.17
NUP50-202ENST00000396096 TANGO2Q6ICL3 276 aa16.1■□□□□ 0.17
NUP50-202ENST00000396096 VITQ6UXI7 678 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms