RNA–Protein interactions for RNA: ENST00000395727.6

PTPN20-208, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 790 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-208ENST00000395727 KIAA0408Q6ZU52 694 aa5.85□□□□□ -1.47
PTPN20-208ENST00000395727 SYDE1Q6ZW31 735 aaPredicted RBP5.85□□□□□ -1.47
PTPN20-208ENST00000395727 COX15Q7KZN9 410 aa5.85□□□□□ -1.47
PTPN20-208ENST00000395727 OVCH1Q7RTY7 1134 aa5.85□□□□□ -1.47
PTPN20-208ENST00000395727 CNTN4Q8IWV2 1026 aa5.85□□□□□ -1.47
PTPN20-208ENST00000395727 Q8N1Y9 231 aa5.85□□□□□ -1.47
PTPN20-208ENST00000395727 TTC29Q8NA56 475 aaPredicted RBP5.85□□□□□ -1.47
PTPN20-208ENST00000395727 TEX19Q8NA77 164 aa5.85□□□□□ -1.47
PTPN20-208ENST00000395727 OR9A1PQ8NGU1 263 aa5.85□□□□□ -1.47
PTPN20-208ENST00000395727 GABPB2Q8TAK5 448 aaPredicted RBP5.85□□□□□ -1.47
PTPN20-208ENST00000395727 COG1Q8WTW3 980 aa5.85□□□□□ -1.47
PTPN20-208ENST00000395727 SMPDL3AQ92484 453 aa5.85□□□□□ -1.47
PTPN20-208ENST00000395727 MAGOHBQ96A72 148 aaKnown RBP5.85□□□□□ -1.47
PTPN20-208ENST00000395727 PTERQ96BW5 349 aa5.85□□□□□ -1.47
PTPN20-208ENST00000395727 LRRC39Q96DD0 335 aa5.85□□□□□ -1.47
PTPN20-208ENST00000395727 FER1L6-AS2Q96M78 137 aa5.85□□□□□ -1.47
PTPN20-208ENST00000395727 IL17FQ96PD4 163 aa5.85□□□□□ -1.47
PTPN20-208ENST00000395727 ZFYVE21Q9BQ24 234 aa5.85□□□□□ -1.47
PTPN20-208ENST00000395727 FAM167BQ9BTA0 163 aa5.85□□□□□ -1.47
PTPN20-208ENST00000395727 TRIM4Q9C037 500 aa5.85□□□□□ -1.47
PTPN20-208ENST00000395727 SPRTNQ9H040 489 aaPredicted RBP5.85□□□□□ -1.47
PTPN20-208ENST00000395727 ZNF71Q9NQZ8 489 aaPredicted RBP5.85□□□□□ -1.47
PTPN20-208ENST00000395727 SLC22A11Q9NSA0 550 aa5.85□□□□□ -1.47
PTPN20-208ENST00000395727 UTP6Q9NYH9 597 aaKnown RBP5.85□□□□□ -1.47
PTPN20-208ENST00000395727 GPR83Q9NYM4 423 aa5.85□□□□□ -1.47
PTPN20-208ENST00000395727 KLHL14Q9P2G3 628 aa5.85□□□□□ -1.47
PTPN20-208ENST00000395727 IFT80Q9P2H3 777 aaPredicted RBP5.85□□□□□ -1.47
PTPN20-208ENST00000395727 DHCR7Q9UBM7 475 aaKnown RBP5.85□□□□□ -1.47
PTPN20-208ENST00000395727 NDOR1Q9UHB4 597 aa5.85□□□□□ -1.47
PTPN20-208ENST00000395727 PCYOX1Q9UHG3 505 aa5.85□□□□□ -1.47
PTPN20-208ENST00000395727 CORO1CQ9ULV4 474 aaPredicted RBP5.85□□□□□ -1.47
PTPN20-208ENST00000395727 PLAGL1Q9UM63 463 aa5.85□□□□□ -1.47
PTPN20-208ENST00000395727 DHRS7Q9Y394 339 aa5.85□□□□□ -1.47
PTPN20-208ENST00000395727 NFS1Q9Y697 457 aa5.85□□□□□ -1.47
PTPN20-208ENST00000395727 FER1L5A0AVI2 2057 aa5.84□□□□□ -1.47
PTPN20-208ENST00000395727 TRBV23-1A0A0A0MS06 115 aa5.84□□□□□ -1.47
PTPN20-208ENST00000395727 MYOCOSA0A1B0GUC4 107 aa5.84□□□□□ -1.47
PTPN20-208ENST00000395727 VSTM2BA6NLU5 285 aa5.84□□□□□ -1.47
PTPN20-208ENST00000395727 ARHGEF33A8MVX0 844 aa5.84□□□□□ -1.47
PTPN20-208ENST00000395727 AGPSO00116 658 aa5.84□□□□□ -1.47
PTPN20-208ENST00000395727 TXNDC9O14530 226 aa5.84□□□□□ -1.47
PTPN20-208ENST00000395727 DNALI1O14645 258 aaPredicted RBP5.84□□□□□ -1.47
PTPN20-208ENST00000395727 PRPF4O43172 522 aaKnown RBP eCLIP5.84□□□□□ -1.47
PTPN20-208ENST00000395727 KIF5CO60282 957 aa5.84□□□□□ -1.47
PTPN20-208ENST00000395727 CTSVO60911 334 aa5.84□□□□□ -1.47
PTPN20-208ENST00000395727 AVILO75366 819 aa5.84□□□□□ -1.47
PTPN20-208ENST00000395727 VPS26AO75436 327 aa5.84□□□□□ -1.47
PTPN20-208ENST00000395727 DNAJB5O75953 348 aa5.84□□□□□ -1.47
PTPN20-208ENST00000395727 ALPPP05187 535 aa5.84□□□□□ -1.47
PTPN20-208ENST00000395727 CYC1P08574 325 aa5.84□□□□□ -1.47
PTPN20-208ENST00000395727 EZRP15311 586 aaKnown RBP5.84□□□□□ -1.47
PTPN20-208ENST00000395727 PGAM1P18669 254 aa5.84□□□□□ -1.47
PTPN20-208ENST00000395727 CHRM3P20309 590 aa5.84□□□□□ -1.47
PTPN20-208ENST00000395727 NR1D1P20393 614 aa5.84□□□□□ -1.47
PTPN20-208ENST00000395727 MMP11P24347 488 aa5.84□□□□□ -1.47
PTPN20-208ENST00000395727 HRH2P25021 359 aa5.84□□□□□ -1.47
PTPN20-208ENST00000395727 IVDP26440 423 aa5.84□□□□□ -1.47
PTPN20-208ENST00000395727 CMPK1P30085 196 aa5.84□□□□□ -1.47
PTPN20-208ENST00000395727 FMO4P31512 558 aa5.84□□□□□ -1.47
PTPN20-208ENST00000395727 SLC1A2P43004 574 aa5.84□□□□□ -1.47
PTPN20-208ENST00000395727 BDKRB1P46663 353 aa5.84□□□□□ -1.47
PTPN20-208ENST00000395727 VPS41P49754 854 aa5.84□□□□□ -1.47
PTPN20-208ENST00000395727 RPL11P62913 178 aaKnown RBP5.84□□□□□ -1.47
PTPN20-208ENST00000395727 ABATP80404 500 aa5.84□□□□□ -1.47
PTPN20-208ENST00000395727 PRDX1Q06830 199 aaKnown RBP5.84□□□□□ -1.47
PTPN20-208ENST00000395727 ILF2Q12905 390 aaKnown RBP5.84□□□□□ -1.47
PTPN20-208ENST00000395727 AIMP2Q13155 320 aaKnown RBP5.84□□□□□ -1.47
PTPN20-208ENST00000395727 SP140Q13342 867 aa5.84□□□□□ -1.47
PTPN20-208ENST00000395727 ATP1A4Q13733 1029 aa5.84□□□□□ -1.47
PTPN20-208ENST00000395727 THOC5Q13769 683 aaKnown RBP5.84□□□□□ -1.47
PTPN20-208ENST00000395727 CRYMQ14894 314 aa5.84□□□□□ -1.47
PTPN20-208ENST00000395727 TRIP13Q15645 432 aaPredicted RBP5.84□□□□□ -1.47
PTPN20-208ENST00000395727 PRTGQ2VWP7 1150 aa5.84□□□□□ -1.47
PTPN20-208ENST00000395727 CCSMST1Q4G0I0 132 aa5.84□□□□□ -1.47
PTPN20-208ENST00000395727 ACSBG2Q5FVE4 666 aa5.84□□□□□ -1.47
PTPN20-208ENST00000395727 SPANXN3Q5MJ09 141 aa5.84□□□□□ -1.47
PTPN20-208ENST00000395727 GARNL3Q5VVW2 1013 aa5.84□□□□□ -1.47
PTPN20-208ENST00000395727 BICRALQ6AI39 1079 aa5.84□□□□□ -1.47
PTPN20-208ENST00000395727 CNSTQ6PJW8 725 aa5.84□□□□□ -1.47
PTPN20-208ENST00000395727 IGFL2Q6UWQ7 119 aa5.84□□□□□ -1.47
PTPN20-208ENST00000395727 CES3Q6UWW8 571 aa5.84□□□□□ -1.47
PTPN20-208ENST00000395727 PPP1R32Q7Z5V6 425 aa5.84□□□□□ -1.47
PTPN20-208ENST00000395727 PCGF5Q86SE9 256 aa5.84□□□□□ -1.47
PTPN20-208ENST00000395727 LRRC56Q8IYG6 542 aaPredicted RBP5.84□□□□□ -1.47
PTPN20-208ENST00000395727 SLC35F6Q8N357 371 aa5.84□□□□□ -1.47
PTPN20-208ENST00000395727 GALNT16Q8N428 558 aa5.84□□□□□ -1.47
PTPN20-208ENST00000395727 OTUD6BQ8N6M0 293 aa5.84□□□□□ -1.47
PTPN20-208ENST00000395727 CLEC1AQ8NC01 280 aa5.84□□□□□ -1.47
PTPN20-208ENST00000395727 FDCSPQ8NFU4 85 aa5.84□□□□□ -1.47
PTPN20-208ENST00000395727 CFAP61Q8NHU2 1237 aa5.84□□□□□ -1.47
PTPN20-208ENST00000395727 CD200R1Q8TD46 325 aa5.84□□□□□ -1.47
PTPN20-208ENST00000395727 THAP3Q8WTV1 239 aaPredicted RBP5.84□□□□□ -1.47
PTPN20-208ENST00000395727 ZNF480Q8WV37 535 aa5.84□□□□□ -1.47
PTPN20-208ENST00000395727 KISS1RQ969F8 398 aaPredicted RBP5.84□□□□□ -1.47
PTPN20-208ENST00000395727 PNPLA2Q96AD5 504 aa5.84□□□□□ -1.47
PTPN20-208ENST00000395727 MS4A14Q96JA4 679 aa5.84□□□□□ -1.47
PTPN20-208ENST00000395727 VPS50Q96JG6 964 aa5.84□□□□□ -1.47
PTPN20-208ENST00000395727 PDLIM2Q96JY6 352 aa5.84□□□□□ -1.47
PTPN20-208ENST00000395727 RUNDC3BQ96NL0 473 aa5.84□□□□□ -1.47
PTPN20-208ENST00000395727 SELENOSQ9BQE4 189 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms