RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 HSDL2Q6YN16 418 aa10.06□□□□□ -0.8
COL4A6-203ENST00000394872 FRMD7Q6ZUT3 714 aa10.06□□□□□ -0.8
COL4A6-203ENST00000394872 ACOT12Q8WYK0 555 aa10.06□□□□□ -0.8
COL4A6-203ENST00000394872 C17orf62Q9BQA9 187 aa10.06□□□□□ -0.8
COL4A6-203ENST00000394872 HCN2Q9UL51 889 aa10.06□□□□□ -0.8
COL4A6-203ENST00000394872 A0A1W2PPL8 197 aa10.06□□□□□ -0.8
COL4A6-203ENST00000394872 GLOD5A6NK44 160 aa10.06□□□□□ -0.8
COL4A6-203ENST00000394872 J3QLW9 94 aa10.06□□□□□ -0.8
COL4A6-203ENST00000394872 ARPC2O15144 300 aa10.06□□□□□ -0.8
COL4A6-203ENST00000394872 CREB1P16220 341 aa10.06□□□□□ -0.8
COL4A6-203ENST00000394872 ZNF19P17023 458 aa10.06□□□□□ -0.8
COL4A6-203ENST00000394872 ETV3P41162 512 aa10.06□□□□□ -0.8
COL4A6-203ENST00000394872 PTPRCAPQ14761 206 aa10.06□□□□□ -0.8
COL4A6-203ENST00000394872 PDCD4Q53EL6 469 aaKnown RBP10.06□□□□□ -0.8
COL4A6-203ENST00000394872 ZNF648Q5T619 568 aaPredicted RBP10.06□□□□□ -0.8
COL4A6-203ENST00000394872 THOC7Q6I9Y2 204 aaKnown RBP10.06□□□□□ -0.8
COL4A6-203ENST00000394872 ZNF782Q6ZMW2 699 aaPredicted RBP10.06□□□□□ -0.8
COL4A6-203ENST00000394872 C14orf80Q86SX3 495 aa10.06□□□□□ -0.8
COL4A6-203ENST00000394872 JPH3Q8WXH2 748 aaPredicted RBP10.06□□□□□ -0.8
COL4A6-203ENST00000394872 TM9SF2Q99805 663 aa10.06□□□□□ -0.8
COL4A6-203ENST00000394872 SMURF1Q9HCE7 757 aa10.06□□□□□ -0.8
COL4A6-203ENST00000394872 MYOM1P52179 1685 aa10.06□□□□□ -0.8
COL4A6-203ENST00000394872 SNED1Q8TER0 1413 aa10.06□□□□□ -0.8
COL4A6-203ENST00000394872 HEPACAM2A8MVW5 462 aa10.06□□□□□ -0.8
COL4A6-203ENST00000394872 EI24O14681 340 aa10.06□□□□□ -0.8
COL4A6-203ENST00000394872 RNF13O43567 381 aa10.06□□□□□ -0.8
COL4A6-203ENST00000394872 OR7A10O76100 309 aa10.06□□□□□ -0.8
COL4A6-203ENST00000394872 STC1P52823 247 aa10.06□□□□□ -0.8
COL4A6-203ENST00000394872 LBX1P52954 281 aa10.06□□□□□ -0.8
COL4A6-203ENST00000394872 MEF2AQ02078 507 aaPredicted RBP10.06□□□□□ -0.8
COL4A6-203ENST00000394872 SLC3A1Q07837 685 aa10.06□□□□□ -0.8
COL4A6-203ENST00000394872 KCNC3Q14003 757 aa10.06□□□□□ -0.8
COL4A6-203ENST00000394872 PLEKHS1Q5SXH7 462 aa10.06□□□□□ -0.8
COL4A6-203ENST00000394872 PRAMEF17Q5VTA0 474 aa10.06□□□□□ -0.8
COL4A6-203ENST00000394872 SLC9A4Q6AI14 798 aa10.06□□□□□ -0.8
COL4A6-203ENST00000394872 CD180Q99467 661 aa10.06□□□□□ -0.8
COL4A6-203ENST00000394872 UCK2Q9BZX2 261 aa10.06□□□□□ -0.8
COL4A6-203ENST00000394872 PIRO00625 290 aa10.06□□□□□ -0.8
COL4A6-203ENST00000394872 CDC123O75794 336 aaPredicted RBP10.06□□□□□ -0.8
COL4A6-203ENST00000394872 DAG1Q14118 895 aa10.06□□□□□ -0.8
COL4A6-203ENST00000394872 DCAF12L1Q5VU92 463 aa10.06□□□□□ -0.8
COL4A6-203ENST00000394872 PYHIN1Q6K0P9 492 aa10.06□□□□□ -0.8
COL4A6-203ENST00000394872 TICAM1Q8IUC6 712 aa10.06□□□□□ -0.8
COL4A6-203ENST00000394872 JAGN1Q8N5M9 183 aa10.06□□□□□ -0.8
COL4A6-203ENST00000394872 IL22RA1Q8N6P7 574 aa10.06□□□□□ -0.8
COL4A6-203ENST00000394872 SPERTQ8NA61 448 aa10.06□□□□□ -0.8
COL4A6-203ENST00000394872 TGM7Q96PF1 710 aa10.06□□□□□ -0.8
COL4A6-203ENST00000394872 TMED9Q9BVK6 235 aa10.06□□□□□ -0.8
COL4A6-203ENST00000394872 NKX2-4Q9H2Z4 354 aa10.06□□□□□ -0.8
COL4A6-203ENST00000394872 TTYH1Q9H313 450 aaPredicted RBP10.06□□□□□ -0.8
COL4A6-203ENST00000394872 XKR8Q9H6D3 395 aa10.06□□□□□ -0.8
COL4A6-203ENST00000394872 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.06□□□□□ -0.8
COL4A6-203ENST00000394872 GNG8Q9UK08 70 aa10.06□□□□□ -0.8
COL4A6-203ENST00000394872 PCDHGA2Q9Y5H1 932 aa10.06□□□□□ -0.8
COL4A6-203ENST00000394872 OR6C74A6NCV1 312 aa10.06□□□□□ -0.8
COL4A6-203ENST00000394872 SOCS5O75159 536 aa10.06□□□□□ -0.8
COL4A6-203ENST00000394872 FBLP22087 321 aaKnown RBP10.06□□□□□ -0.8
COL4A6-203ENST00000394872 LINC00471Q8N535 108 aa10.06□□□□□ -0.8
COL4A6-203ENST00000394872 AQP11Q8NBQ7 271 aa10.06□□□□□ -0.8
COL4A6-203ENST00000394872 OR8H1Q8NGG4 311 aa10.06□□□□□ -0.8
COL4A6-203ENST00000394872 LRRC46Q96FV0 321 aa10.06□□□□□ -0.8
COL4A6-203ENST00000394872 KCTD7Q96MP8 289 aa10.06□□□□□ -0.8
COL4A6-203ENST00000394872 TTYH2Q9BSA4 534 aa10.06□□□□□ -0.8
COL4A6-203ENST00000394872 MAFFQ9ULX9 164 aa10.06□□□□□ -0.8
COL4A6-203ENST00000394872 ABCC6O95255 1503 aa10.06□□□□□ -0.8
COL4A6-203ENST00000394872 PEAK1Q9H792 1746 aa10.06□□□□□ -0.8
COL4A6-203ENST00000394872 MAN2B1O00754 1011 aa10.06□□□□□ -0.8
COL4A6-203ENST00000394872 DLX3O60479 287 aa10.06□□□□□ -0.8
COL4A6-203ENST00000394872 PRKD3O94806 890 aa10.06□□□□□ -0.8
COL4A6-203ENST00000394872 PSKH1P11801 424 aa10.06□□□□□ -0.8
COL4A6-203ENST00000394872 LASP1Q14847 261 aaKnown RBP10.06□□□□□ -0.8
COL4A6-203ENST00000394872 OCLNQ16625 522 aa10.06□□□□□ -0.8
COL4A6-203ENST00000394872 C4orf46Q504U0 113 aa10.06□□□□□ -0.8
COL4A6-203ENST00000394872 ZDHHC24Q6UX98 284 aa10.06□□□□□ -0.8
COL4A6-203ENST00000394872 Q6ZVL8 140 aa10.06□□□□□ -0.8
COL4A6-203ENST00000394872 WDR92Q96MX6 357 aa10.06□□□□□ -0.8
COL4A6-203ENST00000394872 FAM129BQ96TA1 746 aa10.06□□□□□ -0.8
COL4A6-203ENST00000394872 FTSJ1Q9UET6 329 aa10.06□□□□□ -0.8
COL4A6-203ENST00000394872 GLS2Q9UI32 602 aa10.06□□□□□ -0.8
COL4A6-203ENST00000394872 LMO7Q8WWI1 1683 aa10.05□□□□□ -0.8
COL4A6-203ENST00000394872 LTBP3Q9NS15 1303 aa10.05□□□□□ -0.8
COL4A6-203ENST00000394872 AQP12BA6NM10 295 aa10.05□□□□□ -0.8
COL4A6-203ENST00000394872 TTC34A8MYJ7 566 aa10.05□□□□□ -0.8
COL4A6-203ENST00000394872 SOX1O00570 391 aaPredicted RBP10.05□□□□□ -0.8
COL4A6-203ENST00000394872 ITGB1P05556 798 aa10.05□□□□□ -0.8
COL4A6-203ENST00000394872 HNRNPA1P09651 372 aaKnown RBP eCLIP10.05□□□□□ -0.8
COL4A6-203ENST00000394872 HK1P19367 917 aa10.05□□□□□ -0.8
COL4A6-203ENST00000394872 HNF1BP35680 557 aa10.05□□□□□ -0.8
COL4A6-203ENST00000394872 STK19P49842 368 aaPredicted RBP10.05□□□□□ -0.8
COL4A6-203ENST00000394872 PRKCDQ05655 676 aa10.05□□□□□ -0.8
COL4A6-203ENST00000394872 ODF4Q2M2E3 257 aa10.05□□□□□ -0.8
COL4A6-203ENST00000394872 ARL9Q6T311 187 aa10.05□□□□□ -0.8
COL4A6-203ENST00000394872 GPAT4Q86UL3 456 aa10.05□□□□□ -0.8
COL4A6-203ENST00000394872 PLCZ1Q86YW0 608 aa10.05□□□□□ -0.8
COL4A6-203ENST00000394872 NPAS3Q8IXF0 933 aa10.05□□□□□ -0.8
COL4A6-203ENST00000394872 AQP12AQ8IXF9 295 aa10.05□□□□□ -0.8
COL4A6-203ENST00000394872 ZNF611Q8N823 705 aa10.05□□□□□ -0.8
COL4A6-203ENST00000394872 C10orf82Q8WW14 230 aa10.05□□□□□ -0.8
COL4A6-203ENST00000394872 RAB7BQ96AH8 199 aa10.05□□□□□ -0.8
COL4A6-203ENST00000394872 CPNE2Q96FN4 548 aaPredicted RBP10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms