RNA–Protein interactions for RNA: ENST00000393546.8

PDLIM7-204, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-204ENST00000393546 CNOT3O75175 753 aaKnown RBP18.04■□□□□ 0.48
PDLIM7-204ENST00000393546 GLRA3O75311 464 aa18.04■□□□□ 0.48
PDLIM7-204ENST00000393546 WFS1O76024 890 aa18.04■□□□□ 0.48
PDLIM7-204ENST00000393546 SIX3O95343 332 aaPredicted RBP18.04■□□□□ 0.48
PDLIM7-204ENST00000393546 NSA2O95478 260 aaKnown RBP18.04■□□□□ 0.48
PDLIM7-204ENST00000393546 SERPINA6P08185 405 aa18.04■□□□□ 0.48
PDLIM7-204ENST00000393546 FURINP09958 794 aa18.04■□□□□ 0.48
PDLIM7-204ENST00000393546 SBK3P0C264 359 aa18.04■□□□□ 0.48
PDLIM7-204ENST00000393546 CCT5P48643 541 aa18.04■□□□□ 0.48
PDLIM7-204ENST00000393546 HERC3Q15034 1050 aa18.04■□□□□ 0.48
PDLIM7-204ENST00000393546 NKG7Q16617 165 aa18.04■□□□□ 0.48
PDLIM7-204ENST00000393546 TBR1Q16650 682 aa18.04■□□□□ 0.48
PDLIM7-204ENST00000393546 FAM69BQ5VUD6 431 aa18.04■□□□□ 0.48
PDLIM7-204ENST00000393546 SH2D5Q6ZV89 423 aa18.04■□□□□ 0.48
PDLIM7-204ENST00000393546 OR9A4Q8NGU2 314 aa18.04■□□□□ 0.48
PDLIM7-204ENST00000393546 THAP4Q8WY91 577 aa18.04■□□□□ 0.48
PDLIM7-204ENST00000393546 IPPKQ9H8X2 491 aa18.04■□□□□ 0.48
PDLIM7-204ENST00000393546 TRPC4Q9UBN4 977 aa18.04■□□□□ 0.48
PDLIM7-204ENST00000393546 GRID1Q9ULK0 1009 aa18.04■□□□□ 0.48
PDLIM7-204ENST00000393546 ZNF490Q9ULM2 529 aaPredicted RBP18.04■□□□□ 0.48
PDLIM7-204ENST00000393546 SCN3AQ9NY46 2000 aa18.03■□□□□ 0.48
PDLIM7-204ENST00000393546 ERVH48-1M5A8F1 160 aa18.03■□□□□ 0.48
PDLIM7-204ENST00000393546 E2F3O00716 465 aa18.03■□□□□ 0.48
PDLIM7-204ENST00000393546 IL1RNP18510 177 aa18.03■□□□□ 0.48
PDLIM7-204ENST00000393546 SKP1P63208 163 aa18.03■□□□□ 0.48
PDLIM7-204ENST00000393546 IL10RAQ13651 578 aa18.03■□□□□ 0.48
PDLIM7-204ENST00000393546 E2F2Q14209 437 aa18.03■□□□□ 0.48
PDLIM7-204ENST00000393546 LIPJQ5W064 366 aa18.03■□□□□ 0.48
PDLIM7-204ENST00000393546 NIPAL1Q6NVV3 410 aa18.03■□□□□ 0.48
PDLIM7-204ENST00000393546 BORAQ6PGQ7 559 aa18.03■□□□□ 0.48
PDLIM7-204ENST00000393546 ABHD13Q7L211 337 aa18.03■□□□□ 0.48
PDLIM7-204ENST00000393546 GOLGA7Q7Z5G4 137 aa18.03■□□□□ 0.48
PDLIM7-204ENST00000393546 RAB43Q86YS6 212 aa18.03■□□□□ 0.48
PDLIM7-204ENST00000393546 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP18.03■□□□□ 0.48
PDLIM7-204ENST00000393546 CREB3L4Q8TEY5 395 aa18.03■□□□□ 0.48
PDLIM7-204ENST00000393546 CCT6BQ92526 530 aa18.03■□□□□ 0.48
PDLIM7-204ENST00000393546 EXTL1Q92935 676 aa18.03■□□□□ 0.48
PDLIM7-204ENST00000393546 ATP6V1E2Q96A05 226 aa18.03■□□□□ 0.48
PDLIM7-204ENST00000393546 MIEF2Q96C03 454 aa18.03■□□□□ 0.48
PDLIM7-204ENST00000393546 UBL7Q96S82 380 aaPredicted RBP18.03■□□□□ 0.48
PDLIM7-204ENST00000393546 ARHGAP9Q9BRR9 750 aa18.03■□□□□ 0.48
PDLIM7-204ENST00000393546 TMEM109Q9BVC6 243 aa18.03■□□□□ 0.48
PDLIM7-204ENST00000393546 SLC6A16Q9GZN6 736 aa18.03■□□□□ 0.48
PDLIM7-204ENST00000393546 RHBGQ9H310 441 aa18.03■□□□□ 0.48
PDLIM7-204ENST00000393546 ACTR8Q9H981 624 aa18.03■□□□□ 0.48
PDLIM7-204ENST00000393546 PRM3Q9NNZ6 103 aa18.03■□□□□ 0.48
PDLIM7-204ENST00000393546 CTSFQ9UBX1 484 aa18.03■□□□□ 0.48
PDLIM7-204ENST00000393546 MAP4K5Q9Y4K4 846 aa18.03■□□□□ 0.48
PDLIM7-204ENST00000393546 MGAQ8IWI9 3026 aa18.02■□□□□ 0.48
PDLIM7-204ENST00000393546 VSTM2BA6NLU5 285 aa18.02■□□□□ 0.48
PDLIM7-204ENST00000393546 A8MT66 165 aa18.02■□□□□ 0.48
PDLIM7-204ENST00000393546 COPEO14579 308 aa18.02■□□□□ 0.48
PDLIM7-204ENST00000393546 ERLIN1O75477 346 aa18.02■□□□□ 0.48
PDLIM7-204ENST00000393546 CLEC3AO75596 197 aa18.02■□□□□ 0.48
PDLIM7-204ENST00000393546 ALOX12P18054 663 aa18.02■□□□□ 0.48
PDLIM7-204ENST00000393546 KRT4P19013 534 aa18.02■□□□□ 0.48
PDLIM7-204ENST00000393546 CD22P20273 847 aa18.02■□□□□ 0.48
PDLIM7-204ENST00000393546 ATP5F1P24539 256 aaPredicted RBP18.02■□□□□ 0.48
PDLIM7-204ENST00000393546 OTX2P32243 289 aa18.02■□□□□ 0.48
PDLIM7-204ENST00000393546 HPDP32754 393 aaPredicted RBP18.02■□□□□ 0.48
PDLIM7-204ENST00000393546 CRHR1P34998 444 aa18.02■□□□□ 0.48
PDLIM7-204ENST00000393546 HNF4AP41235 474 aa18.02■□□□□ 0.48
PDLIM7-204ENST00000393546 STXBP1P61764 594 aaKnown RBP18.02■□□□□ 0.48
PDLIM7-204ENST00000393546 MED27Q6P2C8 311 aa18.02■□□□□ 0.48
PDLIM7-204ENST00000393546 AFAP1L2Q8N4X5 818 aa18.02■□□□□ 0.48
PDLIM7-204ENST00000393546 AMER3Q8N944 861 aa18.02■□□□□ 0.48
PDLIM7-204ENST00000393546 STT3BQ8TCJ2 826 aa18.02■□□□□ 0.48
PDLIM7-204ENST00000393546 APOBEC4Q8WW27 367 aaKnown RBP18.02■□□□□ 0.48
PDLIM7-204ENST00000393546 TTC9Q92623 222 aa18.02■□□□□ 0.48
PDLIM7-204ENST00000393546 IP6K3Q96PC2 410 aa18.02■□□□□ 0.48
PDLIM7-204ENST00000393546 MKKSQ9NPJ1 570 aaPredicted RBP18.02■□□□□ 0.48
PDLIM7-204ENST00000393546 LGALS13Q9UHV8 139 aa18.02■□□□□ 0.48
PDLIM7-204ENST00000393546 MAN2B2Q9Y2E5 1009 aa18.02■□□□□ 0.48
PDLIM7-204ENST00000393546 NAALAD2Q9Y3Q0 740 aa18.02■□□□□ 0.48
PDLIM7-204ENST00000393546 IGLV3-12A0A075B6K2 115 aa18.01■□□□□ 0.47
PDLIM7-204ENST00000393546 SGK494L7N484 410 aa18.01■□□□□ 0.47
PDLIM7-204ENST00000393546 UGDHO60701 494 aa18.01■□□□□ 0.47
PDLIM7-204ENST00000393546 KLHL18O94889 574 aa18.01■□□□□ 0.47
PDLIM7-204ENST00000393546 ZGLP1P0C6A0 271 aa18.01■□□□□ 0.47
PDLIM7-204ENST00000393546 ZNF888P0CJ79 500 aaPredicted RBP18.01■□□□□ 0.47
PDLIM7-204ENST00000393546 CCR10P46092 362 aa18.01■□□□□ 0.47
PDLIM7-204ENST00000393546 CCNG1P51959 295 aa18.01■□□□□ 0.47
PDLIM7-204ENST00000393546 SNRPNP63162 240 aaKnown RBP18.01■□□□□ 0.47
PDLIM7-204ENST00000393546 SLC18A2Q05940 514 aa18.01■□□□□ 0.47
PDLIM7-204ENST00000393546 HYAL2Q12891 473 aa18.01■□□□□ 0.47
PDLIM7-204ENST00000393546 CCDC153Q494R4 210 aa18.01■□□□□ 0.47
PDLIM7-204ENST00000393546 VWA2Q5GFL6 755 aa18.01■□□□□ 0.47
PDLIM7-204ENST00000393546 TOR1AIP1Q5JTV8 583 aa18.01■□□□□ 0.47
PDLIM7-204ENST00000393546 GRHL2Q6ISB3 625 aa18.01■□□□□ 0.47
PDLIM7-204ENST00000393546 SHISA6Q6ZSJ9 500 aa18.01■□□□□ 0.47
PDLIM7-204ENST00000393546 PRSS41Q7RTY9 318 aa18.01■□□□□ 0.47
PDLIM7-204ENST00000393546 MYLK4Q86YV6 388 aaPredicted RBP18.01■□□□□ 0.47
PDLIM7-204ENST00000393546 SLC22A9Q8IVM8 553 aa18.01■□□□□ 0.47
PDLIM7-204ENST00000393546 LAS2Q8IYD9 372 aa18.01■□□□□ 0.47
PDLIM7-204ENST00000393546 ADAMTS17Q8TE56 1095 aa18.01■□□□□ 0.47
PDLIM7-204ENST00000393546 UTP15Q8TED0 518 aaKnown RBP18.01■□□□□ 0.47
PDLIM7-204ENST00000393546 WBP1Q96G27 269 aa18.01■□□□□ 0.47
PDLIM7-204ENST00000393546 SPSB2Q99619 263 aa18.01■□□□□ 0.47
PDLIM7-204ENST00000393546 KLHL31Q9H511 634 aa18.01■□□□□ 0.47
PDLIM7-204ENST00000393546 SOX17Q9H6I2 414 aaPredicted RBP18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms