RNA–Protein interactions for RNA: ENST00000390509.1

TRAJ28-201, Transcript of T cell receptor alpha joining 28, humanhuman

APPRIS P1 BASIC

Gene TRAJ28, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ28-201ENST00000390509 DOCK10Q96BY6 2186 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 DNAH2Q9P225 4427 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 SPTBN4Q9H254 2564 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 PLEKHG1Q9ULL1 1385 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 PLXNB1O43157 2135 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 DNAH6Q9C0G6 4158 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 LOC105369274A0A096LPK9 316 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 TRGV4A0A0C4DH28 118 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 LOC102723532A0A0G2JNH3 316 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 TEX13DA0A0J9YY54 714 aaPredicted RBP-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 A0A1W2PPM1 405 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 SHTN1A0MZ66 631 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 VPS37CA5D8V6 355 aaPredicted RBP-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 ARHGEF35A5YM69 484 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 C5orf63A6NC05 138 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 FAM90A7PA6NKC0 464 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 EFCAB7A8K855 629 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 TMEM110-MUSTN1A8MSY1 372 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 C17orf100A8MU93 164 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 FAM90A22PA8MWA6 464 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 FAM90A12PA8MX19 464 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 FAM90A23PA8MXZ1 464 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 C2CD4DB7Z1M9 353 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 C11orf94C9JXX5 98 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 GRM8O00222 908 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 SLC1A7O00341 560 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 MCF2LO15068 1137 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 BCAT2O15382 392 aaPredicted RBP-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 DHHO43323 396 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 XPOTO43592 962 aaKnown RBP-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 HTATSF1O43719 755 aaKnown RBP-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 TRAF3IP2O43734 574 aaPredicted RBP-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 TLX2O43763 284 aaPredicted RBP-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 CCNKO75909 580 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 BBOX1O75936 387 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 KRT38O76015 456 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 WISP2O76076 250 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 VAMP5O95183 116 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 KLHL2O95198 593 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 METTL18O95568 372 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 IGHG1P01857 330 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 HLA-DQA1P01909 254 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 C1QCP02747 245 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 CHRM4P08173 479 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 POU2F2P09086 479 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 SPARCP09486 303 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 FGRP09769 529 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 CCDC166P0CW27 439 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 ACP2P11117 423 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 VPREB1P12018 145 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 SKILP12757 684 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 PEPDP12955 493 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 ETFAP13804 333 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 GLULP15104 373 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 TRIM21P19474 475 aaKnown RBP-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 BTF3P20290 206 aaKnown RBP-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 AADACP22760 399 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 HRH2P25021 359 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 EDNRAP25101 427 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 HOXD10P28358 340 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 HTR1EP28566 365 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 CD1BP29016 333 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 SLC7A1P30825 629 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 ATICP31939 592 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 FCGR2BP31994 310 aaPredicted RBP-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 FCGR2CP31995 323 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 OTX2P32243 289 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 GPR183P32249 361 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 SHMT2P34897 504 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 CTRLP40313 264 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 HADHAP40939 763 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 APOBEC1P41238 236 aaKnown RBP-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 MAGEA3P43357 314 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 MAGEA6P43360 314 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 MTNR1AP48039 350 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 PRIM2P49643 509 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 LHX2P50458 406 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 CRYBA2P53672 197 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 RCAN1P53805 252 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 RAB1AP62820 205 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 YWHAZP63104 245 aaKnown RBP-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 NOP14P78316 857 aaKnown RBP-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 GALK2Q01415 458 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 CDK18Q07002 472 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 ZNF616Q08AN1 781 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 ZNF816Q0VGE8 651 aaPredicted RBP-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 SGCGQ13326 291 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 ASAH1Q13510 395 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 ITPK1Q13572 414 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 GNL2Q13823 731 aaKnown RBP-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 BAATQ14032 418 aaPredicted RBP-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 SIM2Q14190 667 aaPredicted RBP-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 SQLEQ14534 574 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 TMEM132DQ14C87 1099 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 PCBP1Q15365 356 aaKnown RBP eCLIP-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 DHCR24Q15392 516 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 MLF2Q15773 248 aaPredicted RBP-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 CCL14Q16627 93 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 PPP1R3AQ16821 1122 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 VWC2Q2TAL6 325 aa-0.44□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms