RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 NEURL2Q9BR09 285 aa12.71□□□□□ -0.38
TRAPPC9-201ENST00000389328 OR51B5Q9H339 312 aa12.71□□□□□ -0.38
TRAPPC9-201ENST00000389328 BEX1Q9HBH7 125 aa12.71□□□□□ -0.38
TRAPPC9-201ENST00000389328 MRPL17Q9NRX2 175 aaKnown RBP12.71□□□□□ -0.38
TRAPPC9-201ENST00000389328 ZDHHC3Q9NYG2 299 aa12.71□□□□□ -0.38
TRAPPC9-201ENST00000389328 KIAA1522Q9P206 1035 aaPredicted RBP12.71□□□□□ -0.38
TRAPPC9-201ENST00000389328 SARDHQ9UL12 918 aa12.71□□□□□ -0.38
TRAPPC9-201ENST00000389328 IRGMA1A4Y4 181 aa12.7□□□□□ -0.38
TRAPPC9-201ENST00000389328 ATG13O75143 517 aa12.7□□□□□ -0.38
TRAPPC9-201ENST00000389328 H1F0P07305 194 aaKnown RBP12.7□□□□□ -0.38
TRAPPC9-201ENST00000389328 STAT5AP42229 794 aa12.7□□□□□ -0.38
TRAPPC9-201ENST00000389328 DSTNP60981 165 aa12.7□□□□□ -0.38
TRAPPC9-201ENST00000389328 AGAP6Q5VW22 663 aa12.7□□□□□ -0.38
TRAPPC9-201ENST00000389328 PPP2R2DQ66LE6 453 aa12.7□□□□□ -0.38
TRAPPC9-201ENST00000389328 Q6ZSR9 355 aa12.7□□□□□ -0.38
TRAPPC9-201ENST00000389328 UBE2FQ969M7 185 aa12.7□□□□□ -0.38
TRAPPC9-201ENST00000389328 RAD51AP1Q96B01 352 aa12.7□□□□□ -0.38
TRAPPC9-201ENST00000389328 AGAP4Q96P64 663 aa12.7□□□□□ -0.38
TRAPPC9-201ENST00000389328 CCM2Q9BSQ5 444 aa12.7□□□□□ -0.38
TRAPPC9-201ENST00000389328 ARNT2Q9HBZ2 717 aa12.7□□□□□ -0.38
TRAPPC9-201ENST00000389328 DIABLOQ9NR28 239 aa12.7□□□□□ -0.38
TRAPPC9-201ENST00000389328 FAM92AA1XBS5 289 aa12.7□□□□□ -0.38
TRAPPC9-201ENST00000389328 QSOX1O00391 747 aa12.7□□□□□ -0.38
TRAPPC9-201ENST00000389328 CHST10O43529 356 aa12.7□□□□□ -0.38
TRAPPC9-201ENST00000389328 KDELR3O43731 214 aa12.7□□□□□ -0.38
TRAPPC9-201ENST00000389328 KLK1P06870 262 aa12.7□□□□□ -0.38
TRAPPC9-201ENST00000389328 ELFN1P0C7U0 828 aa12.7□□□□□ -0.38
TRAPPC9-201ENST00000389328 CPN2P22792 545 aa12.7□□□□□ -0.38
TRAPPC9-201ENST00000389328 CD300CQ08708 224 aa12.7□□□□□ -0.38
TRAPPC9-201ENST00000389328 RUNDC3AQ59EK9 446 aa12.7□□□□□ -0.38
TRAPPC9-201ENST00000389328 KIAA0319Q5VV43 1072 aa12.7□□□□□ -0.38
TRAPPC9-201ENST00000389328 OXR1Q8N573 874 aa12.7□□□□□ -0.38
TRAPPC9-201ENST00000389328 ZNF433Q8N7K0 673 aaPredicted RBP12.7□□□□□ -0.38
TRAPPC9-201ENST00000389328 C3orf58Q8NDZ4 430 aa12.7□□□□□ -0.38
TRAPPC9-201ENST00000389328 SOCS4Q8WXH5 440 aa12.7□□□□□ -0.38
TRAPPC9-201ENST00000389328 ARMC5Q96C12 935 aa12.7□□□□□ -0.38
TRAPPC9-201ENST00000389328 EGLN2Q96KS0 407 aa12.7□□□□□ -0.38
TRAPPC9-201ENST00000389328 PTPN18Q99952 460 aa12.7□□□□□ -0.38
TRAPPC9-201ENST00000389328 YIPF4Q9BSR8 244 aa12.7□□□□□ -0.38
TRAPPC9-201ENST00000389328 RHBGQ9H310 441 aa12.7□□□□□ -0.38
TRAPPC9-201ENST00000389328 FXYD1O00168 92 aa12.7□□□□□ -0.38
TRAPPC9-201ENST00000389328 SEPT4O43236 478 aa12.7□□□□□ -0.38
TRAPPC9-201ENST00000389328 FSHRP23945 695 aa12.7□□□□□ -0.38
TRAPPC9-201ENST00000389328 GABRR2P28476 465 aa12.7□□□□□ -0.38
TRAPPC9-201ENST00000389328 NFATC2Q13469 925 aa12.7□□□□□ -0.38
TRAPPC9-201ENST00000389328 SLBPQ14493 270 aaKnown RBP eCLIP12.7□□□□□ -0.38
TRAPPC9-201ENST00000389328 ZNF267Q14586 743 aaPredicted RBP12.7□□□□□ -0.38
TRAPPC9-201ENST00000389328 USP41Q3LFD5 358 aa12.7□□□□□ -0.38
TRAPPC9-201ENST00000389328 CEACAM20Q6UY09 585 aa12.7□□□□□ -0.38
TRAPPC9-201ENST00000389328 IKBIPQ70UQ0 350 aa12.7□□□□□ -0.38
TRAPPC9-201ENST00000389328 BTLAQ7Z6A9 289 aa12.7□□□□□ -0.38
TRAPPC9-201ENST00000389328 C17orf64Q86WR6 236 aa12.7□□□□□ -0.38
TRAPPC9-201ENST00000389328 SLC43A3Q8NBI5 491 aa12.7□□□□□ -0.38
TRAPPC9-201ENST00000389328 RAB8BQ92930 207 aa12.7□□□□□ -0.38
TRAPPC9-201ENST00000389328 NT5C3BQ969T7 300 aa12.7□□□□□ -0.38
TRAPPC9-201ENST00000389328 FAIM2Q9BWQ8 316 aa12.7□□□□□ -0.38
TRAPPC9-201ENST00000389328 COQ3Q9NZJ6 369 aa12.7□□□□□ -0.38
TRAPPC9-201ENST00000389328 RPS6KB2Q9UBS0 482 aa12.7□□□□□ -0.38
TRAPPC9-201ENST00000389328 GRIP1Q9Y3R0 1128 aa12.7□□□□□ -0.38
TRAPPC9-201ENST00000389328 A0A0U1RQF3 1178 aa12.7□□□□□ -0.38
TRAPPC9-201ENST00000389328 INMT-MINDY4F8WBC2 141 aa12.7□□□□□ -0.38
TRAPPC9-201ENST00000389328 ASGR1P07306 291 aa12.7□□□□□ -0.38
TRAPPC9-201ENST00000389328 FHP07954 510 aa12.7□□□□□ -0.38
TRAPPC9-201ENST00000389328 JUNBP17275 347 aaPredicted RBP12.7□□□□□ -0.38
TRAPPC9-201ENST00000389328 CXCR2P25025 360 aa12.7□□□□□ -0.38
TRAPPC9-201ENST00000389328 HNMTP50135 292 aa12.7□□□□□ -0.38
TRAPPC9-201ENST00000389328 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.7□□□□□ -0.38
TRAPPC9-201ENST00000389328 THOC6Q86W42 341 aaKnown RBP12.7□□□□□ -0.38
TRAPPC9-201ENST00000389328 PTRH1Q86Y79 214 aaKnown RBP12.7□□□□□ -0.38
TRAPPC9-201ENST00000389328 CELF2-AS1Q8N7Q2 184 aa12.7□□□□□ -0.38
TRAPPC9-201ENST00000389328 ZNF548Q8NEK5 533 aaPredicted RBP12.7□□□□□ -0.38
TRAPPC9-201ENST00000389328 OR9Q2Q8NGE9 314 aa12.7□□□□□ -0.38
TRAPPC9-201ENST00000389328 LILRB4Q8NHJ6 448 aa12.7□□□□□ -0.38
TRAPPC9-201ENST00000389328 BPIFB1Q8TDL5 484 aa12.7□□□□□ -0.38
TRAPPC9-201ENST00000389328 APIPQ96GX9 242 aa12.7□□□□□ -0.38
TRAPPC9-201ENST00000389328 CNDP2Q96KP4 475 aaKnown RBP12.7□□□□□ -0.38
TRAPPC9-201ENST00000389328 TSSK6Q9BXA6 273 aa12.7□□□□□ -0.38
TRAPPC9-201ENST00000389328 OARD1Q9Y530 152 aa12.7□□□□□ -0.38
TRAPPC9-201ENST00000389328 PCDHGA3Q9Y5H0 932 aa12.7□□□□□ -0.38
TRAPPC9-201ENST00000389328 TRAV6A0A075B6T7 132 aa12.69□□□□□ -0.38
TRAPPC9-201ENST00000389328 RPS13P62277 151 aaKnown RBP12.69□□□□□ -0.38
TRAPPC9-201ENST00000389328 KEAP1Q14145 624 aa12.69□□□□□ -0.38
TRAPPC9-201ENST00000389328 ZNF431Q8TF32 576 aaPredicted RBP12.69□□□□□ -0.38
TRAPPC9-201ENST00000389328 HTATIP2Q9BUP3 242 aa12.69□□□□□ -0.38
TRAPPC9-201ENST00000389328 MRPL9Q9BYD2 267 aaKnown RBP12.69□□□□□ -0.38
TRAPPC9-201ENST00000389328 AMBRA1Q9C0C7 1298 aa12.69□□□□□ -0.38
TRAPPC9-201ENST00000389328 HEBP1Q9NRV9 189 aa12.69□□□□□ -0.38
TRAPPC9-201ENST00000389328 PCDH10Q9P2E7 1040 aa12.69□□□□□ -0.38
TRAPPC9-201ENST00000389328 NLKQ9UBE8 527 aa12.69□□□□□ -0.38
TRAPPC9-201ENST00000389328 ACSL6Q9UKU0 697 aa12.69□□□□□ -0.38
TRAPPC9-201ENST00000389328 NME7Q9Y5B8 376 aa12.69□□□□□ -0.38
TRAPPC9-201ENST00000389328 UBE2QL1A1L167 161 aa12.69□□□□□ -0.38
TRAPPC9-201ENST00000389328 CENPBD1B2RD01 187 aa12.69□□□□□ -0.38
TRAPPC9-201ENST00000389328 LAMP1P11279 417 aa12.69□□□□□ -0.38
TRAPPC9-201ENST00000389328 SSTR4P31391 388 aa12.69□□□□□ -0.38
TRAPPC9-201ENST00000389328 CASP3P42574 277 aa12.69□□□□□ -0.38
TRAPPC9-201ENST00000389328 KCNA10Q16322 511 aa12.69□□□□□ -0.38
TRAPPC9-201ENST00000389328 ARHGAP15Q53QZ3 475 aa12.69□□□□□ -0.38
TRAPPC9-201ENST00000389328 ATAT1Q5SQI0 421 aa12.69□□□□□ -0.38
TRAPPC9-201ENST00000389328 TMEM220Q6QAJ8 160 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms