RNA–Protein interactions for RNA: ENST00000382723.4

MSX1-201, Transcript of msh homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX1, Length 1,939 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX1-201ENST00000382723 DEFB107AQ8IZN7 70 aa25.63■■□□□ 1.69
MSX1-201ENST00000382723 FAM9CQ8IZT9 166 aa25.63■■□□□ 1.69
MSX1-201ENST00000382723 TRPV3Q8NET8 790 aa25.63■■□□□ 1.69
MSX1-201ENST00000382723 C11orf16Q9NQ32 467 aa25.63■■□□□ 1.69
MSX1-201ENST00000382723 AHSPQ9NZD4 102 aa25.63■■□□□ 1.69
MSX1-201ENST00000382723 A0A0J9YVX5 310 aa25.62■■□□□ 1.69
MSX1-201ENST00000382723 A0A1W2PP18 115 aa25.62■■□□□ 1.69
MSX1-201ENST00000382723 BBIP1A8MTZ0 92 aa25.62■■□□□ 1.69
MSX1-201ENST00000382723 TRIM38O00635 465 aa25.62■■□□□ 1.69
MSX1-201ENST00000382723 FKBP9O95302 570 aa25.62■■□□□ 1.69
MSX1-201ENST00000382723 ZIC1Q15915 447 aa25.62■■□□□ 1.69
MSX1-201ENST00000382723 GALNT18Q6P9A2 607 aa25.62■■□□□ 1.69
MSX1-201ENST00000382723 SLC23A3Q6PIS1 610 aa25.62■■□□□ 1.69
MSX1-201ENST00000382723 BAHD1Q8TBE0 780 aaPredicted RBP25.62■■□□□ 1.69
MSX1-201ENST00000382723 CENPKQ9BS16 269 aa25.62■■□□□ 1.69
MSX1-201ENST00000382723 THTPAQ9BU02 230 aa25.62■■□□□ 1.69
MSX1-201ENST00000382723 REXO4Q9GZR2 422 aaKnown RBP25.62■■□□□ 1.69
MSX1-201ENST00000382723 KLHL31Q9H511 634 aa25.62■■□□□ 1.69
MSX1-201ENST00000382723 CLMPQ9H6B4 373 aa25.62■■□□□ 1.69
MSX1-201ENST00000382723 ANKMY1Q9P2S6 941 aa25.62■■□□□ 1.69
MSX1-201ENST00000382723 LRIT2A6NDA9 550 aa25.61■■□□□ 1.69
MSX1-201ENST00000382723 ARHGAP33O14559 1287 aa25.61■■□□□ 1.69
MSX1-201ENST00000382723 NUDT21O43809 227 aaKnown RBP25.61■■□□□ 1.69
MSX1-201ENST00000382723 DFNA5O60443 496 aa25.61■■□□□ 1.69
MSX1-201ENST00000382723 CDH3P22223 829 aa25.61■■□□□ 1.69
MSX1-201ENST00000382723 GSTM2P28161 218 aa25.61■■□□□ 1.69
MSX1-201ENST00000382723 PGM1P36871 562 aa25.61■■□□□ 1.69
MSX1-201ENST00000382723 OR1D5P58170 312 aa25.61■■□□□ 1.69
MSX1-201ENST00000382723 HKDC1Q2TB90 917 aa25.61■■□□□ 1.69
MSX1-201ENST00000382723 FAM174BQ3ZCQ3 159 aa25.61■■□□□ 1.69
MSX1-201ENST00000382723 FAM92BQ6ZTR7 304 aa25.61■■□□□ 1.69
MSX1-201ENST00000382723 TSPEARQ8WU66 669 aa25.61■■□□□ 1.69
MSX1-201ENST00000382723 SLC13A3Q8WWT9 602 aa25.61■■□□□ 1.69
MSX1-201ENST00000382723 RAB3IPQ96QF0 476 aaPredicted RBP25.61■■□□□ 1.69
MSX1-201ENST00000382723 GTPBP2Q9BX10 602 aaKnown RBP25.61■■□□□ 1.69
MSX1-201ENST00000382723 ARRDC1-AS1Q9H2J1 176 aa25.61■■□□□ 1.69
MSX1-201ENST00000382723 SIRT5Q9NXA8 310 aa25.61■■□□□ 1.69
MSX1-201ENST00000382723 CACNA1EQ15878 2313 aa25.61■■□□□ 1.69
MSX1-201ENST00000382723 ASPDHA6ND91 283 aa25.61■■□□□ 1.69
MSX1-201ENST00000382723 GALR2O43603 387 aaPredicted RBP25.61■■□□□ 1.69
MSX1-201ENST00000382723 SEMA3DO95025 777 aa25.61■■□□□ 1.69
MSX1-201ENST00000382723 ALPPL2P10696 532 aa25.61■■□□□ 1.69
MSX1-201ENST00000382723 ST6GAL1P15907 406 aa25.61■■□□□ 1.69
MSX1-201ENST00000382723 GLB1P16278 677 aa25.61■■□□□ 1.69
MSX1-201ENST00000382723 PLA2G16P53816 162 aa25.61■■□□□ 1.69
MSX1-201ENST00000382723 SPANXN4Q5MJ08 99 aa25.61■■□□□ 1.69
MSX1-201ENST00000382723 ZCCHC8Q6NZY4 707 aaKnown RBP25.61■■□□□ 1.69
MSX1-201ENST00000382723 Q8N9G6 341 aaPredicted RBP25.61■■□□□ 1.69
MSX1-201ENST00000382723 GLB1L3Q8NCI6 653 aaPredicted RBP25.61■■□□□ 1.69
MSX1-201ENST00000382723 NCSTNQ92542 709 aa25.61■■□□□ 1.69
MSX1-201ENST00000382723 RGMAQ96B86 450 aa25.61■■□□□ 1.69
MSX1-201ENST00000382723 DUSP23Q9BVJ7 150 aa25.61■■□□□ 1.69
MSX1-201ENST00000382723 AICDAQ9GZX7 198 aa25.61■■□□□ 1.69
MSX1-201ENST00000382723 SEMA6CQ9H3T2 930 aa25.61■■□□□ 1.69
MSX1-201ENST00000382723 IL1RL2Q9HB29 575 aa25.61■■□□□ 1.69
MSX1-201ENST00000382723 PADI4Q9UM07 663 aa25.61■■□□□ 1.69
MSX1-201ENST00000382723 KLK4Q9Y5K2 254 aa25.61■■□□□ 1.69
MSX1-201ENST00000382723 SNRNP200O75643 2136 aaKnown RBP25.6■■□□□ 1.69
MSX1-201ENST00000382723 DMDP11532 3685 aa25.6■■□□□ 1.69
MSX1-201ENST00000382723 VPS13AQ96RL7 3174 aa25.6■■□□□ 1.69
MSX1-201ENST00000382723 HEATR5BQ9P2D3 2071 aa25.6■■□□□ 1.69
MSX1-201ENST00000382723 A0A0G2JN53 185 aa25.6■■□□□ 1.69
MSX1-201ENST00000382723 H0YHG0 523 aa25.6■■□□□ 1.69
MSX1-201ENST00000382723 CFLARO15519 480 aa25.6■■□□□ 1.69
MSX1-201ENST00000382723 CCT8P50990 548 aa25.6■■□□□ 1.69
MSX1-201ENST00000382723 HYAL2Q12891 473 aa25.6■■□□□ 1.69
MSX1-201ENST00000382723 C16orf89Q6UX73 402 aa25.6■■□□□ 1.69
MSX1-201ENST00000382723 VN1R4Q7Z5H5 301 aa25.6■■□□□ 1.69
MSX1-201ENST00000382723 PCYOX1LQ8NBM8 494 aa25.6■■□□□ 1.69
MSX1-201ENST00000382723 AHCYL2Q96HN2 611 aaKnown RBP25.6■■□□□ 1.69
MSX1-201ENST00000382723 TMEM74Q96NL1 305 aa25.6■■□□□ 1.69
MSX1-201ENST00000382723 WDR41Q9HAD4 459 aa25.6■■□□□ 1.69
MSX1-201ENST00000382723 MAP10Q9P2G4 905 aa25.6■■□□□ 1.69
MSX1-201ENST00000382723 PILRAQ9UKJ1 303 aa25.6■■□□□ 1.69
MSX1-201ENST00000382723 SEC23IPQ9Y6Y8 1000 aaKnown RBP25.6■■□□□ 1.69
MSX1-201ENST00000382723 CAPN5O15484 640 aaPredicted RBP25.59■■□□□ 1.69
MSX1-201ENST00000382723 YKT6O15498 198 aa25.59■■□□□ 1.69
MSX1-201ENST00000382723 EEDO75530 441 aaKnown RBP25.59■■□□□ 1.69
MSX1-201ENST00000382723 MPLP40238 635 aa25.59■■□□□ 1.69
MSX1-201ENST00000382723 CLNS1AP54105 237 aaKnown RBP25.59■■□□□ 1.69
MSX1-201ENST00000382723 EPHA4P54764 986 aa25.59■■□□□ 1.69
MSX1-201ENST00000382723 PGS1Q32NB8 556 aa25.59■■□□□ 1.69
MSX1-201ENST00000382723 TOR1AIP1Q5JTV8 583 aa25.59■■□□□ 1.69
MSX1-201ENST00000382723 UBE3DQ7Z6J8 389 aa25.59■■□□□ 1.69
MSX1-201ENST00000382723 OR4C6Q8NH72 309 aa25.59■■□□□ 1.69
MSX1-201ENST00000382723 CLPTM1LQ96KA5 538 aa25.59■■□□□ 1.69
MSX1-201ENST00000382723 TGM7Q96PF1 710 aa25.59■■□□□ 1.69
MSX1-201ENST00000382723 OR2A5Q96R48 311 aa25.59■■□□□ 1.69
MSX1-201ENST00000382723 C17orf62Q9BQA9 187 aa25.59■■□□□ 1.69
MSX1-201ENST00000382723 ZNF717Q9BY31 904 aaPredicted RBP25.59■■□□□ 1.69
MSX1-201ENST00000382723 CER1O95813 267 aa25.59■■□□□ 1.69
MSX1-201ENST00000382723 PRPS1L1P21108 318 aa25.59■■□□□ 1.69
MSX1-201ENST00000382723 BSGP35613 385 aa25.59■■□□□ 1.69
MSX1-201ENST00000382723 ZNF763Q0D2J5 394 aa25.59■■□□□ 1.69
MSX1-201ENST00000382723 TLR1Q15399 786 aa25.59■■□□□ 1.69
MSX1-201ENST00000382723 AMZ1Q400G9 498 aa25.59■■□□□ 1.69
MSX1-201ENST00000382723 PAGE3Q5JUK9 113 aa25.59■■□□□ 1.69
MSX1-201ENST00000382723 CCNYL2Q5T2Q4 361 aa25.59■■□□□ 1.69
MSX1-201ENST00000382723 FRMPD2BQ6IN97 320 aa25.59■■□□□ 1.69
MSX1-201ENST00000382723 SLC2A7Q6PXP3 512 aa25.59■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms