RNA–Protein interactions for RNA: ENST00000381990.6

GPNMB-202, Transcript of glycoprotein nmb, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GPNMB, Length 2,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-202ENST00000381990 LRRC3BQ96PB8 259 aa8.63□□□□□ -1.03
GPNMB-202ENST00000381990 COPS4Q9BT78 406 aa8.63□□□□□ -1.03
GPNMB-202ENST00000381990 CIPCQ9C0C6 399 aa8.63□□□□□ -1.03
GPNMB-202ENST00000381990 IPPKQ9H8X2 491 aa8.63□□□□□ -1.03
GPNMB-202ENST00000381990 PNMA8BQ9ULN7 279 aaPredicted RBP8.63□□□□□ -1.03
GPNMB-202ENST00000381990 PCDHGB6Q9Y5F9 930 aa8.63□□□□□ -1.03
GPNMB-202ENST00000381990 CHD9Q3L8U1 2897 aa8.63□□□□□ -1.03
GPNMB-202ENST00000381990 HOXC11O43248 304 aaPredicted RBP8.63□□□□□ -1.03
GPNMB-202ENST00000381990 ZW10O43264 779 aa8.63□□□□□ -1.03
GPNMB-202ENST00000381990 WBP4O75554 376 aaKnown RBP8.63□□□□□ -1.03
GPNMB-202ENST00000381990 ADH1CP00326 375 aa8.63□□□□□ -1.03
GPNMB-202ENST00000381990 FABP3P05413 133 aa8.63□□□□□ -1.03
GPNMB-202ENST00000381990 ADH5P11766 374 aa8.63□□□□□ -1.03
GPNMB-202ENST00000381990 LHCGRP22888 699 aa8.63□□□□□ -1.03
GPNMB-202ENST00000381990 CA5AP35218 305 aa8.63□□□□□ -1.03
GPNMB-202ENST00000381990 GGT5P36269 586 aa8.63□□□□□ -1.03
GPNMB-202ENST00000381990 LIPAP38571 399 aa8.63□□□□□ -1.03
GPNMB-202ENST00000381990 NKX2-5P52952 324 aaPredicted RBP8.63□□□□□ -1.03
GPNMB-202ENST00000381990 SEMG2Q02383 582 aa8.63□□□□□ -1.03
GPNMB-202ENST00000381990 NPRL3Q12980 569 aa8.63□□□□□ -1.03
GPNMB-202ENST00000381990 TIGD6Q17RP2 521 aa8.63□□□□□ -1.03
GPNMB-202ENST00000381990 FAHD1Q6P587 224 aa8.63□□□□□ -1.03
GPNMB-202ENST00000381990 TMC5Q6UXY8 1006 aa8.63□□□□□ -1.03
GPNMB-202ENST00000381990 MACC1Q6ZN28 852 aa8.63□□□□□ -1.03
GPNMB-202ENST00000381990 MSANTD1Q6ZTZ1 278 aa8.63□□□□□ -1.03
GPNMB-202ENST00000381990 GDPD3Q7L5L3 318 aa8.63□□□□□ -1.03
GPNMB-202ENST00000381990 VASH1Q7L8A9 365 aaPredicted RBP8.63□□□□□ -1.03
GPNMB-202ENST00000381990 HORMAD1Q86X24 394 aa8.63□□□□□ -1.03
GPNMB-202ENST00000381990 LIX1Q8N485 282 aa8.63□□□□□ -1.03
GPNMB-202ENST00000381990 C12orf76Q8N812 135 aaPredicted RBP8.63□□□□□ -1.03
GPNMB-202ENST00000381990 ASCC1Q8N9N2 400 aaKnown RBP8.63□□□□□ -1.03
GPNMB-202ENST00000381990 GALNT6Q8NCL4 622 aa8.63□□□□□ -1.03
GPNMB-202ENST00000381990 WFIKKN2Q8TEU8 576 aa8.63□□□□□ -1.03
GPNMB-202ENST00000381990 HRASLS5Q96KN8 279 aa8.63□□□□□ -1.03
GPNMB-202ENST00000381990 BOCQ9BWV1 1114 aa8.63□□□□□ -1.03
GPNMB-202ENST00000381990 CDADC1Q9BWV3 514 aa8.63□□□□□ -1.03
GPNMB-202ENST00000381990 NUAK2Q9H093 628 aa8.63□□□□□ -1.03
GPNMB-202ENST00000381990 VNN3Q9NY84 501 aa8.63□□□□□ -1.03
GPNMB-202ENST00000381990 WBP11Q9Y2W2 641 aaKnown RBP8.63□□□□□ -1.03
GPNMB-202ENST00000381990 PIKFYVEQ9Y2I7 2098 aa8.63□□□□□ -1.03
GPNMB-202ENST00000381990 PLK4O00444 970 aa8.62□□□□□ -1.03
GPNMB-202ENST00000381990 ULK1O75385 1050 aa8.62□□□□□ -1.03
GPNMB-202ENST00000381990 SRPRAP08240 638 aaKnown RBP8.62□□□□□ -1.03
GPNMB-202ENST00000381990 ALOX12P18054 663 aa8.62□□□□□ -1.03
GPNMB-202ENST00000381990 HTR3AP46098 478 aa8.62□□□□□ -1.03
GPNMB-202ENST00000381990 DGKGP49619 791 aa8.62□□□□□ -1.03
GPNMB-202ENST00000381990 RGS4P49798 205 aa8.62□□□□□ -1.03
GPNMB-202ENST00000381990 IL1RL1Q01638 556 aa8.62□□□□□ -1.03
GPNMB-202ENST00000381990 PTSQ03393 145 aa8.62□□□□□ -1.03
GPNMB-202ENST00000381990 GTF2H3Q13889 308 aa8.62□□□□□ -1.03
GPNMB-202ENST00000381990 SMN1Q16637 294 aaKnown RBP8.62□□□□□ -1.03
GPNMB-202ENST00000381990 DNAJC14Q6Y2X3 702 aaPredicted RBP8.62□□□□□ -1.03
GPNMB-202ENST00000381990 CEP68Q76N32 757 aa8.62□□□□□ -1.03
GPNMB-202ENST00000381990 SLC46A3Q7Z3Q1 461 aa8.62□□□□□ -1.03
GPNMB-202ENST00000381990 PHACTR4Q8IZ21 702 aa8.62□□□□□ -1.03
GPNMB-202ENST00000381990 CLDN19Q8N6F1 224 aa8.62□□□□□ -1.03
GPNMB-202ENST00000381990 ATG16L2Q8NAA4 619 aa8.62□□□□□ -1.03
GPNMB-202ENST00000381990 SIMC1Q8NDZ2 872 aa8.62□□□□□ -1.03
GPNMB-202ENST00000381990 FLCNQ8NFG4 579 aa8.62□□□□□ -1.03
GPNMB-202ENST00000381990 CYB5D2Q8WUJ1 264 aa8.62□□□□□ -1.03
GPNMB-202ENST00000381990 MYLIPQ8WY64 445 aa8.62□□□□□ -1.03
GPNMB-202ENST00000381990 PYCR2Q96C36 320 aa8.62□□□□□ -1.03
GPNMB-202ENST00000381990 TMCO6Q96DC7 493 aa8.62□□□□□ -1.03
GPNMB-202ENST00000381990 RSPRY1Q96DX4 576 aa8.62□□□□□ -1.03
GPNMB-202ENST00000381990 HBEGFQ99075 208 aa8.62□□□□□ -1.03
GPNMB-202ENST00000381990 GABARAPL3Q9BY60 117 aa8.62□□□□□ -1.03
GPNMB-202ENST00000381990 LRTM1Q9HBL6 345 aa8.62□□□□□ -1.03
GPNMB-202ENST00000381990 PDP1Q9P0J1 537 aaPredicted RBP8.62□□□□□ -1.03
GPNMB-202ENST00000381990 B4GALT6Q9UBX8 382 aa8.62□□□□□ -1.03
GPNMB-202ENST00000381990 CFL2Q9Y281 166 aa8.62□□□□□ -1.03
GPNMB-202ENST00000381990 KLK4Q9Y5K2 254 aa8.62□□□□□ -1.03
GPNMB-202ENST00000381990 LYVE1Q9Y5Y7 322 aa8.62□□□□□ -1.03
GPNMB-202ENST00000381990 AP1M2Q9Y6Q5 423 aa8.62□□□□□ -1.03
GPNMB-202ENST00000381990 TNFRSF10AO00220 468 aa8.62□□□□□ -1.03
GPNMB-202ENST00000381990 FFAR2O15552 330 aa8.62□□□□□ -1.03
GPNMB-202ENST00000381990 PCDHGA12O60330 932 aa8.62□□□□□ -1.03
GPNMB-202ENST00000381990 SEMG1P04279 462 aa8.62□□□□□ -1.03
GPNMB-202ENST00000381990 CISD3P0C7P0 127 aa8.62□□□□□ -1.03
GPNMB-202ENST00000381990 TRAPPC2P0DI81 140 aa8.62□□□□□ -1.03
GPNMB-202ENST00000381990 TRAPPC2BP0DI82 140 aa8.62□□□□□ -1.03
GPNMB-202ENST00000381990 NSG1P42857 185 aa8.62□□□□□ -1.03
GPNMB-202ENST00000381990 PXNP49023 591 aaPredicted RBP8.62□□□□□ -1.03
GPNMB-202ENST00000381990 LIMK1P53667 647 aa8.62□□□□□ -1.03
GPNMB-202ENST00000381990 DMPKQ09013 629 aa8.62□□□□□ -1.03
GPNMB-202ENST00000381990 ABRQ12979 859 aa8.62□□□□□ -1.03
GPNMB-202ENST00000381990 CAMK2GQ13555 558 aaPredicted RBP8.62□□□□□ -1.03
GPNMB-202ENST00000381990 STARD3Q14849 445 aa8.62□□□□□ -1.03
GPNMB-202ENST00000381990 DUSP6Q16828 381 aa8.62□□□□□ -1.03
GPNMB-202ENST00000381990 AAK1Q2M2I8 961 aa8.62□□□□□ -1.03
GPNMB-202ENST00000381990 TIMM50Q3ZCQ8 353 aa8.62□□□□□ -1.03
GPNMB-202ENST00000381990 ERICH5Q6P6B1 374 aa8.62□□□□□ -1.03
GPNMB-202ENST00000381990 SYTL1Q8IYJ3 562 aa8.62□□□□□ -1.03
GPNMB-202ENST00000381990 FAM83FQ8NEG4 500 aaPredicted RBP8.62□□□□□ -1.03
GPNMB-202ENST00000381990 OR7G1Q8NGA0 311 aa8.62□□□□□ -1.03
GPNMB-202ENST00000381990 SORCS1Q8WY21 1168 aa8.62□□□□□ -1.03
GPNMB-202ENST00000381990 REEP1Q9H902 201 aa8.62□□□□□ -1.03
GPNMB-202ENST00000381990 MARCH7Q9H992 704 aa8.62□□□□□ -1.03
GPNMB-202ENST00000381990 SFXN1Q9H9B4 322 aa8.62□□□□□ -1.03
GPNMB-202ENST00000381990 ZDHHC3Q9NYG2 299 aa8.62□□□□□ -1.03
GPNMB-202ENST00000381990 EHD3Q9NZN3 535 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms