RNA–Protein interactions for RNA: ENST00000381208.9

RPAIN-202, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-202ENST00000381208 LCE2BO14633 110 aa12.25□□□□□ -0.45
RPAIN-202ENST00000381208 CLDN1O95832 211 aa12.25□□□□□ -0.45
RPAIN-202ENST00000381208 ALOX12P18054 663 aa12.25□□□□□ -0.45
RPAIN-202ENST00000381208 IVDP26440 423 aa12.25□□□□□ -0.45
RPAIN-202ENST00000381208 AHRP35869 848 aa12.25□□□□□ -0.45
RPAIN-202ENST00000381208 TAS2R50P59544 299 aa12.25□□□□□ -0.45
RPAIN-202ENST00000381208 DR1Q01658 176 aa12.25□□□□□ -0.45
RPAIN-202ENST00000381208 RBPJQ06330 500 aa12.25□□□□□ -0.45
RPAIN-202ENST00000381208 ZNF33BQ06732 778 aa12.25□□□□□ -0.45
RPAIN-202ENST00000381208 NSDHLQ15738 373 aa12.25□□□□□ -0.45
RPAIN-202ENST00000381208 PHKG1Q16816 387 aa12.25□□□□□ -0.45
RPAIN-202ENST00000381208 MEP1AQ16819 746 aa12.25□□□□□ -0.45
RPAIN-202ENST00000381208 MSS51Q4VC12 460 aa12.25□□□□□ -0.45
RPAIN-202ENST00000381208 STEAP4Q687X5 459 aa12.25□□□□□ -0.45
RPAIN-202ENST00000381208 H3F3CQ6NXT2 135 aa12.25□□□□□ -0.45
RPAIN-202ENST00000381208 MTFR2Q6P444 385 aa12.25□□□□□ -0.45
RPAIN-202ENST00000381208 MBOAT1Q6ZNC8 495 aa12.25□□□□□ -0.45
RPAIN-202ENST00000381208 ABHD13Q7L211 337 aa12.25□□□□□ -0.45
RPAIN-202ENST00000381208 LGI4Q8N135 537 aa12.25□□□□□ -0.45
RPAIN-202ENST00000381208 AFAP1L2Q8N4X5 818 aa12.25□□□□□ -0.45
RPAIN-202ENST00000381208 NKAPQ8N5F7 415 aaKnown RBP12.25□□□□□ -0.45
RPAIN-202ENST00000381208 SLC5A8Q8N695 610 aa12.25□□□□□ -0.45
RPAIN-202ENST00000381208 HORMAD2Q8N7B1 307 aa12.25□□□□□ -0.45
RPAIN-202ENST00000381208 TRPV3Q8NET8 790 aa12.25□□□□□ -0.45
RPAIN-202ENST00000381208 ZCCHC10Q8TBK6 192 aa12.25□□□□□ -0.45
RPAIN-202ENST00000381208 SLC5A11Q8WWX8 675 aa12.25□□□□□ -0.45
RPAIN-202ENST00000381208 VPS39Q96JC1 886 aa12.25□□□□□ -0.45
RPAIN-202ENST00000381208 MMP25Q9NPA2 562 aa12.25□□□□□ -0.45
RPAIN-202ENST00000381208 HCN3Q9P1Z3 774 aa12.25□□□□□ -0.45
RPAIN-202ENST00000381208 ZFATQ9P243 1243 aa12.25□□□□□ -0.45
RPAIN-202ENST00000381208 RNF14Q9UBS8 474 aa12.25□□□□□ -0.45
RPAIN-202ENST00000381208 ZFP69BQ9UJL9 534 aa12.25□□□□□ -0.45
RPAIN-202ENST00000381208 NAALAD2Q9Y3Q0 740 aa12.25□□□□□ -0.45
RPAIN-202ENST00000381208 DYRK1BQ9Y463 629 aa12.25□□□□□ -0.45
RPAIN-202ENST00000381208 KCNE2Q9Y6J6 123 aa12.25□□□□□ -0.45
RPAIN-202ENST00000381208 UTP20O75691 2785 aaKnown RBP12.24□□□□□ -0.45
RPAIN-202ENST00000381208 FEZF1A0PJY2 475 aa12.24□□□□□ -0.45
RPAIN-202ENST00000381208 NDUFS4O43181 175 aa12.24□□□□□ -0.45
RPAIN-202ENST00000381208 OR1F1O43749 312 aa12.24□□□□□ -0.45
RPAIN-202ENST00000381208 LCMT2O60294 686 aaKnown RBP12.24□□□□□ -0.45
RPAIN-202ENST00000381208 SEC24DO94855 1032 aaPredicted RBP12.24□□□□□ -0.45
RPAIN-202ENST00000381208 ELK3P41970 407 aa12.24□□□□□ -0.45
RPAIN-202ENST00000381208 HNMTP50135 292 aa12.24□□□□□ -0.45
RPAIN-202ENST00000381208 TDGF1P3P51864 188 aa12.24□□□□□ -0.45
RPAIN-202ENST00000381208 CDKL1Q00532 357 aa12.24□□□□□ -0.45
RPAIN-202ENST00000381208 ACTN3Q08043 901 aaPredicted RBP12.24□□□□□ -0.45
RPAIN-202ENST00000381208 MGAT5Q09328 741 aa12.24□□□□□ -0.45
RPAIN-202ENST00000381208 ZRSR2Q15696 482 aaKnown RBP12.24□□□□□ -0.45
RPAIN-202ENST00000381208 ACER2Q5QJU3 275 aa12.24□□□□□ -0.45
RPAIN-202ENST00000381208 ANKRD37Q7Z713 158 aa12.24□□□□□ -0.45
RPAIN-202ENST00000381208 KCT2Q8NC54 265 aa12.24□□□□□ -0.45
RPAIN-202ENST00000381208 NT5CQ8TCD5 201 aa12.24□□□□□ -0.45
RPAIN-202ENST00000381208 RELTQ969Z4 430 aa12.24□□□□□ -0.45
RPAIN-202ENST00000381208 TBC1D20Q96BZ9 403 aa12.24□□□□□ -0.45
RPAIN-202ENST00000381208 CFAP36Q96G28 342 aa12.24□□□□□ -0.45
RPAIN-202ENST00000381208 AIF1LQ9BQI0 150 aa12.24□□□□□ -0.45
RPAIN-202ENST00000381208 PELI2Q9HAT8 420 aa12.24□□□□□ -0.45
RPAIN-202ENST00000381208 KCNK13Q9HB14 408 aa12.24□□□□□ -0.45
RPAIN-202ENST00000381208 SUCOQ9UBS9 1254 aaKnown RBP12.24□□□□□ -0.45
RPAIN-202ENST00000381208 CHMP2BQ9UQN3 213 aa12.24□□□□□ -0.45
RPAIN-202ENST00000381208 TEX264Q9Y6I9 313 aa12.24□□□□□ -0.45
RPAIN-202ENST00000381208 SYNDIG1LA6NDD5 238 aa12.23□□□□□ -0.45
RPAIN-202ENST00000381208 A8MUI8 341 aa12.23□□□□□ -0.45
RPAIN-202ENST00000381208 TTI1O43156 1089 aa12.23□□□□□ -0.45
RPAIN-202ENST00000381208 GALR3O60755 368 aaPredicted RBP12.23□□□□□ -0.45
RPAIN-202ENST00000381208 RDH16O75452 317 aa12.23□□□□□ -0.45
RPAIN-202ENST00000381208 STATHP02808 62 aa12.23□□□□□ -0.45
RPAIN-202ENST00000381208 FHP07954 510 aa12.23□□□□□ -0.45
RPAIN-202ENST00000381208 CELA2AP08217 269 aa12.23□□□□□ -0.45
RPAIN-202ENST00000381208 ZNF37AP17032 561 aaPredicted RBP12.23□□□□□ -0.45
RPAIN-202ENST00000381208 GSTM2P28161 218 aa12.23□□□□□ -0.45
RPAIN-202ENST00000381208 HPDP32754 393 aaPredicted RBP12.23□□□□□ -0.45
RPAIN-202ENST00000381208 DCTP40126 519 aa12.23□□□□□ -0.45
RPAIN-202ENST00000381208 PAFAH1B1P43034 410 aa12.23□□□□□ -0.45
RPAIN-202ENST00000381208 SCTRP47872 440 aa12.23□□□□□ -0.45
RPAIN-202ENST00000381208 RHAGQ02094 409 aa12.23□□□□□ -0.45
RPAIN-202ENST00000381208 ABRAXAS2Q15018 415 aa12.23□□□□□ -0.45
RPAIN-202ENST00000381208 ZNF766Q5HY98 468 aa12.23□□□□□ -0.45
RPAIN-202ENST00000381208 HIST2H2BCQ6DN03 193 aa12.23□□□□□ -0.45
RPAIN-202ENST00000381208 PAPD4Q6PIY7 484 aaKnown RBP12.23□□□□□ -0.45
RPAIN-202ENST00000381208 TMEM207Q6UWW9 146 aa12.23□□□□□ -0.45
RPAIN-202ENST00000381208 GFRALQ6UXV0 394 aa12.23□□□□□ -0.45
RPAIN-202ENST00000381208 LANCL3Q6ZV70 420 aa12.23□□□□□ -0.45
RPAIN-202ENST00000381208 PRSS41Q7RTY9 318 aa12.23□□□□□ -0.45
RPAIN-202ENST00000381208 ADAMTSL2Q86TH1 951 aa12.23□□□□□ -0.45
RPAIN-202ENST00000381208 IGDCC3Q8IVU1 814 aa12.23□□□□□ -0.45
RPAIN-202ENST00000381208 BBOF1Q8ND07 529 aa12.23□□□□□ -0.45
RPAIN-202ENST00000381208 TTLQ8NG68 377 aa12.23□□□□□ -0.45
RPAIN-202ENST00000381208 PYCR2Q96C36 320 aa12.23□□□□□ -0.45
RPAIN-202ENST00000381208 PEX11GQ96HA9 241 aa12.23□□□□□ -0.45
RPAIN-202ENST00000381208 SEC16BQ96JE7 1060 aa12.23□□□□□ -0.45
RPAIN-202ENST00000381208 TAAR6Q96RI8 345 aa12.23□□□□□ -0.45
RPAIN-202ENST00000381208 MACROD1Q9BQ69 325 aa12.23□□□□□ -0.45
RPAIN-202ENST00000381208 UTP23Q9BRU9 249 aaKnown RBP12.23□□□□□ -0.45
RPAIN-202ENST00000381208 RUBCNLQ9H714 662 aa12.23□□□□□ -0.45
RPAIN-202ENST00000381208 TRMT1Q9NXH9 659 aaKnown RBP12.23□□□□□ -0.45
RPAIN-202ENST00000381208 SH2B3Q9UQQ2 575 aa12.23□□□□□ -0.45
RPAIN-202ENST00000381208 SAR1BQ9Y6B6 198 aa12.23□□□□□ -0.45
RPAIN-202ENST00000381208 CENPEQ02224 2701 aa12.23□□□□□ -0.45
RPAIN-202ENST00000381208 CACNA1DQ01668 2161 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 6.2 ms