RNA–Protein interactions for RNA: ENST00000378572.7

PRPF18-202, Transcript of pre-mRNA processing factor 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF18, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-202ENST00000378572 IL17FQ96PD4 163 aa13.13□□□□□ -0.31
PRPF18-202ENST00000378572 INTS7Q9NVH2 962 aaKnown RBP13.13□□□□□ -0.31
PRPF18-202ENST00000378572 NUDT4Q9NZJ9 180 aa13.13□□□□□ -0.31
PRPF18-202ENST00000378572 C5AR2Q9P296 337 aa13.13□□□□□ -0.31
PRPF18-202ENST00000378572 B3GNT3Q9Y2A9 372 aa13.13□□□□□ -0.31
PRPF18-202ENST00000378572 SHANK1Q9Y566 2161 aa13.12□□□□□ -0.31
PRPF18-202ENST00000378572 PCSK5Q92824 1860 aa13.12□□□□□ -0.31
PRPF18-202ENST00000378572 ESPL1Q14674 2120 aa13.12□□□□□ -0.31
PRPF18-202ENST00000378572 GMNCA6NCL1 334 aa13.12□□□□□ -0.31
PRPF18-202ENST00000378572 A8MT66 165 aa13.12□□□□□ -0.31
PRPF18-202ENST00000378572 MASP2O00187 686 aa13.12□□□□□ -0.31
PRPF18-202ENST00000378572 IPO13O94829 963 aaKnown RBP13.12□□□□□ -0.31
PRPF18-202ENST00000378572 SERPINE1P05121 402 aa13.12□□□□□ -0.31
PRPF18-202ENST00000378572 PEBP1P30086 187 aaKnown RBP13.12□□□□□ -0.31
PRPF18-202ENST00000378572 NAA20P61599 178 aa13.12□□□□□ -0.31
PRPF18-202ENST00000378572 CHI3L2Q15782 390 aa13.12□□□□□ -0.31
PRPF18-202ENST00000378572 PLEKHN1Q494U1 663 aaPredicted RBP13.12□□□□□ -0.31
PRPF18-202ENST00000378572 CDKL4Q5MAI5 379 aa13.12□□□□□ -0.31
PRPF18-202ENST00000378572 TTC23LQ6PF05 361 aa13.12□□□□□ -0.31
PRPF18-202ENST00000378572 PPP1R32Q7Z5V6 425 aa13.12□□□□□ -0.31
PRPF18-202ENST00000378572 GPSM1Q86YR5 675 aa13.12□□□□□ -0.31
PRPF18-202ENST00000378572 VRK3Q8IV63 474 aa13.12□□□□□ -0.31
PRPF18-202ENST00000378572 DCUN1D3Q8IWE4 304 aa13.12□□□□□ -0.31
PRPF18-202ENST00000378572 ZADH2Q8N4Q0 377 aa13.12□□□□□ -0.31
PRPF18-202ENST00000378572 METTL27Q8N6F8 245 aaPredicted RBP13.12□□□□□ -0.31
PRPF18-202ENST00000378572 LMNTD1Q8N9Z9 388 aa13.12□□□□□ -0.31
PRPF18-202ENST00000378572 CUEDC1Q9NWM3 386 aaPredicted RBP13.12□□□□□ -0.31
PRPF18-202ENST00000378572 TSR3Q9UJK0 312 aaKnown RBP13.12□□□□□ -0.31
PRPF18-202ENST00000378572 OARD1Q9Y530 152 aa13.12□□□□□ -0.31
PRPF18-202ENST00000378572 ICE1Q9Y2F5 2266 aa13.12□□□□□ -0.31
PRPF18-202ENST00000378572 PRRC2CQ9Y520 2896 aaKnown RBP13.12□□□□□ -0.31
PRPF18-202ENST00000378572 STX16-NPEPL1H3BU86 382 aa13.11□□□□□ -0.31
PRPF18-202ENST00000378572 GFYI3L273 518 aa13.11□□□□□ -0.31
PRPF18-202ENST00000378572 STX16O14662 325 aa13.11□□□□□ -0.31
PRPF18-202ENST00000378572 ALOX12BO75342 701 aa13.11□□□□□ -0.31
PRPF18-202ENST00000378572 MATN4O95460 622 aa13.11□□□□□ -0.31
PRPF18-202ENST00000378572 SERPINB5P36952 375 aa13.11□□□□□ -0.31
PRPF18-202ENST00000378572 CDKL1Q00532 357 aa13.11□□□□□ -0.31
PRPF18-202ENST00000378572 GABPB1Q06547 395 aaPredicted RBP13.11□□□□□ -0.31
PRPF18-202ENST00000378572 BST1Q10588 318 aa13.11□□□□□ -0.31
PRPF18-202ENST00000378572 TGFBIQ15582 683 aa13.11□□□□□ -0.31
PRPF18-202ENST00000378572 SF1Q15637 639 aaKnown RBP13.11□□□□□ -0.31
PRPF18-202ENST00000378572 MCATQ8IVS2 390 aaKnown RBP13.11□□□□□ -0.31
PRPF18-202ENST00000378572 DNAJC22Q8N4W6 341 aa13.11□□□□□ -0.31
PRPF18-202ENST00000378572 RAB42Q8N4Z0 105 aa13.11□□□□□ -0.31
PRPF18-202ENST00000378572 TTC29Q8NA56 475 aaPredicted RBP13.11□□□□□ -0.31
PRPF18-202ENST00000378572 PDPRQ8NCN5 879 aa13.11□□□□□ -0.31
PRPF18-202ENST00000378572 PPP1R14CQ8TAE6 165 aa13.11□□□□□ -0.31
PRPF18-202ENST00000378572 FLVCR1-AS1Q8TAF5 88 aa13.11□□□□□ -0.31
PRPF18-202ENST00000378572 ASB11Q8WXH4 323 aa13.11□□□□□ -0.31
PRPF18-202ENST00000378572 SLC22A18Q96BI1 424 aa13.11□□□□□ -0.31
PRPF18-202ENST00000378572 SNRNP40Q96DI7 357 aaKnown RBP13.11□□□□□ -0.31
PRPF18-202ENST00000378572 ATP13A2Q9NQ11 1180 aa13.11□□□□□ -0.31
PRPF18-202ENST00000378572 ASF1BQ9NVP2 202 aa13.11□□□□□ -0.31
PRPF18-202ENST00000378572 FBXL4Q9UKA2 621 aa13.11□□□□□ -0.31
PRPF18-202ENST00000378572 FER1L5A0AVI2 2057 aa13.11□□□□□ -0.31
PRPF18-202ENST00000378572 A0A1B0GX78 115 aa13.1□□□□□ -0.31
PRPF18-202ENST00000378572 TMEM114B3SHH9 223 aa13.1□□□□□ -0.31
PRPF18-202ENST00000378572 UBXN8O00124 270 aa13.1□□□□□ -0.31
PRPF18-202ENST00000378572 SNNO75324 88 aaPredicted RBP13.1□□□□□ -0.31
PRPF18-202ENST00000378572 PSIP1O75475 530 aaKnown RBP13.1□□□□□ -0.31
PRPF18-202ENST00000378572 SNUPNO95149 360 aaKnown RBP13.1□□□□□ -0.31
PRPF18-202ENST00000378572 RNF224P0DH78 156 aa13.1□□□□□ -0.31
PRPF18-202ENST00000378572 PIM1P11309 404 aaPredicted RBP13.1□□□□□ -0.31
PRPF18-202ENST00000378572 GRIA3P42263 894 aa13.1□□□□□ -0.31
PRPF18-202ENST00000378572 GABRA4P48169 554 aa13.1□□□□□ -0.31
PRPF18-202ENST00000378572 ARSFP54793 590 aa13.1□□□□□ -0.31
PRPF18-202ENST00000378572 STX3Q13277 289 aa13.1□□□□□ -0.31
PRPF18-202ENST00000378572 SHISA6Q6ZSJ9 500 aa13.1□□□□□ -0.31
PRPF18-202ENST00000378572 FRA10AC1Q70Z53 315 aa13.1□□□□□ -0.31
PRPF18-202ENST00000378572 FBXO15Q8NCQ5 510 aaPredicted RBP13.1□□□□□ -0.31
PRPF18-202ENST00000378572 L3HYPDHQ96EM0 354 aa13.1□□□□□ -0.31
PRPF18-202ENST00000378572 C7orf26Q96N11 449 aa13.1□□□□□ -0.31
PRPF18-202ENST00000378572 GATA5Q9BWX5 397 aaPredicted RBP13.1□□□□□ -0.31
PRPF18-202ENST00000378572 C1QTNF3Q9BXJ4 246 aa13.1□□□□□ -0.31
PRPF18-202ENST00000378572 CHRNA10Q9GZZ6 450 aa13.1□□□□□ -0.31
PRPF18-202ENST00000378572 THAP1Q9NVV9 213 aa13.1□□□□□ -0.31
PRPF18-202ENST00000378572 SUPT3HB4E1H0 165 aa13.1□□□□□ -0.31
PRPF18-202ENST00000378572 H3BMH7 237 aa13.1□□□□□ -0.31
PRPF18-202ENST00000378572 RRP9O43818 475 aaKnown RBP13.1□□□□□ -0.31
PRPF18-202ENST00000378572 NPHS1O60500 1241 aa13.1□□□□□ -0.31
PRPF18-202ENST00000378572 EDF1O60869 148 aaKnown RBP13.1□□□□□ -0.31
PRPF18-202ENST00000378572 CNOT3O75175 753 aaKnown RBP13.1□□□□□ -0.31
PRPF18-202ENST00000378572 SUPT3HO75486 399 aa13.1□□□□□ -0.31
PRPF18-202ENST00000378572 DDAH2O95865 285 aa13.1□□□□□ -0.31
PRPF18-202ENST00000378572 UMODP07911 640 aa13.1□□□□□ -0.31
PRPF18-202ENST00000378572 VIMP08670 466 aaKnown RBP13.1□□□□□ -0.31
PRPF18-202ENST00000378572 IMPDH1P20839 514 aa13.1□□□□□ -0.31
PRPF18-202ENST00000378572 SEC24CP53992 1094 aa13.1□□□□□ -0.31
PRPF18-202ENST00000378572 ALDH18A1P54886 795 aaKnown RBP13.1□□□□□ -0.31
PRPF18-202ENST00000378572 AP1S2P56377 157 aa13.1□□□□□ -0.31
PRPF18-202ENST00000378572 RBBP7Q16576 425 aa13.1□□□□□ -0.31
PRPF18-202ENST00000378572 ZC3H12BQ5HYM0 836 aaKnown RBP13.1□□□□□ -0.31
PRPF18-202ENST00000378572 MRPL14Q6P1L8 145 aaKnown RBP13.1□□□□□ -0.31
PRPF18-202ENST00000378572 UNC5DQ6UXZ4 953 aa13.1□□□□□ -0.31
PRPF18-202ENST00000378572 UBE2R2Q712K3 238 aaPredicted RBP13.1□□□□□ -0.31
PRPF18-202ENST00000378572 LRRC34Q8IZ02 419 aa13.1□□□□□ -0.31
PRPF18-202ENST00000378572 CNDP1Q96KN2 507 aa13.1□□□□□ -0.31
PRPF18-202ENST00000378572 FOPNLQ96NB1 174 aa13.1□□□□□ -0.31
PRPF18-202ENST00000378572 RAB11FIP5Q9BXF6 653 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms