RNA–Protein interactions for RNA: ENST00000378512.5

RER1-202, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 1 (best) BASIC

Gene RER1, Length 1,404 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-202ENST00000378512 ACOT9Q9Y305 439 aa16.11■□□□□ 0.17
RER1-202ENST00000378512 A0A087X1B8 175 aa16.1■□□□□ 0.17
RER1-202ENST00000378512 IDSB3KWA1 339 aa16.1■□□□□ 0.17
RER1-202ENST00000378512 PRAMEF4O60810 478 aa16.1■□□□□ 0.17
RER1-202ENST00000378512 KERAO60938 352 aa16.1■□□□□ 0.17
RER1-202ENST00000378512 BMP10O95393 424 aa16.1■□□□□ 0.17
RER1-202ENST00000378512 ACSL3O95573 720 aa16.1■□□□□ 0.17
RER1-202ENST00000378512 SMIM10L1P0DMW3 83 aa16.1■□□□□ 0.17
RER1-202ENST00000378512 C1GALT1C1LP0DN25 315 aa16.1■□□□□ 0.17
RER1-202ENST00000378512 MTHFD2P13995 350 aa16.1■□□□□ 0.17
RER1-202ENST00000378512 EPORP19235 508 aa16.1■□□□□ 0.17
RER1-202ENST00000378512 TFEBP19484 476 aa16.1■□□□□ 0.17
RER1-202ENST00000378512 PCDH1Q08174 1060 aa16.1■□□□□ 0.17
RER1-202ENST00000378512 CDC16Q13042 620 aa16.1■□□□□ 0.17
RER1-202ENST00000378512 BMPR2Q13873 1038 aa16.1■□□□□ 0.17
RER1-202ENST00000378512 MYBPC3Q14896 1274 aa16.1■□□□□ 0.17
RER1-202ENST00000378512 SYT16Q17RD7 645 aa16.1■□□□□ 0.17
RER1-202ENST00000378512 PRAMEF9Q5VWM5 478 aa16.1■□□□□ 0.17
RER1-202ENST00000378512 HIST2H2BCQ6DN03 193 aa16.1■□□□□ 0.17
RER1-202ENST00000378512 RAPH1Q70E73 1250 aa16.1■□□□□ 0.17
RER1-202ENST00000378512 TMPRSS11BQ86T26 416 aa16.1■□□□□ 0.17
RER1-202ENST00000378512 TBC1D1Q86TI0 1168 aaPredicted RBP16.1■□□□□ 0.17
RER1-202ENST00000378512 ATCAYQ86WG3 371 aa16.1■□□□□ 0.17
RER1-202ENST00000378512 IFT20Q8IY31 132 aa16.1■□□□□ 0.17
RER1-202ENST00000378512 GALNT16Q8N428 558 aa16.1■□□□□ 0.17
RER1-202ENST00000378512 FAM26EQ8N5C1 309 aa16.1■□□□□ 0.17
RER1-202ENST00000378512 TBC1D19Q8N5T2 526 aa16.1■□□□□ 0.17
RER1-202ENST00000378512 RBMXL3Q8N7X1 1067 aaKnown RBP16.1■□□□□ 0.17
RER1-202ENST00000378512 CLEC1AQ8NC01 280 aa16.1■□□□□ 0.17
RER1-202ENST00000378512 CREB3L4Q8TEY5 395 aa16.1■□□□□ 0.17
RER1-202ENST00000378512 NXNL1Q96CM4 212 aa16.1■□□□□ 0.17
RER1-202ENST00000378512 SMIM10Q96HG1 83 aa16.1■□□□□ 0.17
RER1-202ENST00000378512 GPR78Q96P69 363 aa16.1■□□□□ 0.17
RER1-202ENST00000378512 AIF1LQ9BQI0 150 aa16.1■□□□□ 0.17
RER1-202ENST00000378512 CAPS2Q9BXY5 557 aa16.1■□□□□ 0.17
RER1-202ENST00000378512 PITHD1Q9GZP4 211 aaPredicted RBP16.1■□□□□ 0.17
RER1-202ENST00000378512 NT5DC2Q9H857 520 aa16.1■□□□□ 0.17
RER1-202ENST00000378512 CNOT10Q9H9A5 744 aaKnown RBP16.1■□□□□ 0.17
RER1-202ENST00000378512 GPR83Q9NYM4 423 aa16.1■□□□□ 0.17
RER1-202ENST00000378512 C5AR2Q9P296 337 aa16.1■□□□□ 0.17
RER1-202ENST00000378512 C3orf18Q9UK00 162 aa16.1■□□□□ 0.17
RER1-202ENST00000378512 FBXL4Q9UKA2 621 aa16.1■□□□□ 0.17
RER1-202ENST00000378512 NFU1Q9UMS0 254 aa16.1■□□□□ 0.17
RER1-202ENST00000378512 USP9YO00507 2555 aaPredicted RBP16.09■□□□□ 0.17
RER1-202ENST00000378512 LOC102723996A0A087X1L8 192 aa16.09■□□□□ 0.17
RER1-202ENST00000378512 BLACEA4D250 179 aa16.09■□□□□ 0.17
RER1-202ENST00000378512 NCF1BA6NI72 391 aaPredicted RBP16.09■□□□□ 0.17
RER1-202ENST00000378512 NCF1CA8MVU1 366 aaPredicted RBP16.09■□□□□ 0.17
RER1-202ENST00000378512 NDUFS4O43181 175 aa16.09■□□□□ 0.17
RER1-202ENST00000378512 STK16O75716 305 aa16.09■□□□□ 0.17
RER1-202ENST00000378512 ABHD2P08910 425 aa16.09■□□□□ 0.17
RER1-202ENST00000378512 RNF224P0DH78 156 aa16.09■□□□□ 0.17
RER1-202ENST00000378512 NCF1P14598 390 aaPredicted RBP16.09■□□□□ 0.17
RER1-202ENST00000378512 IL1RNP18510 177 aa16.09■□□□□ 0.17
RER1-202ENST00000378512 AIMP2Q13155 320 aaKnown RBP16.09■□□□□ 0.17
RER1-202ENST00000378512 HERC3Q15034 1050 aa16.09■□□□□ 0.17
RER1-202ENST00000378512 JMJD6Q6NYC1 403 aaPredicted RBP16.09■□□□□ 0.17
RER1-202ENST00000378512 TMEM205Q6UW68 189 aa16.09■□□□□ 0.17
RER1-202ENST00000378512 SHISA5Q8N114 240 aa16.09■□□□□ 0.17
RER1-202ENST00000378512 TRPV3Q8NET8 790 aa16.09■□□□□ 0.17
RER1-202ENST00000378512 UBTD2Q8WUN7 234 aa16.09■□□□□ 0.17
RER1-202ENST00000378512 SEC16BQ96JE7 1060 aa16.09■□□□□ 0.17
RER1-202ENST00000378512 PAFAH2Q99487 392 aa16.09■□□□□ 0.17
RER1-202ENST00000378512 MESP1Q9BRJ9 268 aa16.09■□□□□ 0.17
RER1-202ENST00000378512 TXLNGYQ9BZA5 131 aa16.09■□□□□ 0.17
RER1-202ENST00000378512 ALG9Q9H6U8 611 aa16.09■□□□□ 0.17
RER1-202ENST00000378512 ZNF552Q9H707 407 aaPredicted RBP16.09■□□□□ 0.17
RER1-202ENST00000378512 ATP13A2Q9NQ11 1180 aa16.09■□□□□ 0.17
RER1-202ENST00000378512 DNAJC11Q9NVH1 559 aa16.09■□□□□ 0.17
RER1-202ENST00000378512 NUDT4Q9NZJ9 180 aa16.09■□□□□ 0.17
RER1-202ENST00000378512 ZNF180Q9UJW8 692 aa16.09■□□□□ 0.17
RER1-202ENST00000378512 RNF112Q9ULX5 631 aa16.09■□□□□ 0.17
RER1-202ENST00000378512 ZNF451Q9Y4E5 1061 aa16.09■□□□□ 0.17
RER1-202ENST00000378512 SHANK1Q9Y566 2161 aa16.09■□□□□ 0.17
RER1-202ENST00000378512 PRRC2CQ9Y520 2896 aaKnown RBP16.09■□□□□ 0.17
RER1-202ENST00000378512 SCN2AQ99250 2005 aa16.08■□□□□ 0.17
RER1-202ENST00000378512 CPAMD8Q8IZJ3 1885 aa16.08■□□□□ 0.16
RER1-202ENST00000378512 FFAR3O14843 346 aa16.08■□□□□ 0.16
RER1-202ENST00000378512 GPR42O15529 346 aa16.08■□□□□ 0.16
RER1-202ENST00000378512 KLK8O60259 260 aa16.08■□□□□ 0.16
RER1-202ENST00000378512 GALR3O60755 368 aaPredicted RBP16.08■□□□□ 0.16
RER1-202ENST00000378512 KLHL2O95198 593 aa16.08■□□□□ 0.16
RER1-202ENST00000378512 SERPINA6P08185 405 aa16.08■□□□□ 0.16
RER1-202ENST00000378512 CXCR2P25025 360 aa16.08■□□□□ 0.16
RER1-202ENST00000378512 VARSP26640 1264 aaKnown RBP16.08■□□□□ 0.16
RER1-202ENST00000378512 GSTM2P28161 218 aa16.08■□□□□ 0.16
RER1-202ENST00000378512 HSPA7P48741 367 aa16.08■□□□□ 0.16
RER1-202ENST00000378512 SERPINB8P50452 374 aa16.08■□□□□ 0.16
RER1-202ENST00000378512 MAT1AQ00266 395 aaKnown RBP16.08■□□□□ 0.16
RER1-202ENST00000378512 IRF9Q00978 393 aa16.08■□□□□ 0.16
RER1-202ENST00000378512 ACAP2Q15057 778 aa16.08■□□□□ 0.16
RER1-202ENST00000378512 RBBP7Q16576 425 aa16.08■□□□□ 0.16
RER1-202ENST00000378512 TUBB8Q3ZCM7 444 aa16.08■□□□□ 0.16
RER1-202ENST00000378512 SLC6A19Q695T7 634 aa16.08■□□□□ 0.16
RER1-202ENST00000378512 NIPAL1Q6NVV3 410 aa16.08■□□□□ 0.16
RER1-202ENST00000378512 IGFL3Q6UXB1 125 aa16.08■□□□□ 0.16
RER1-202ENST00000378512 EIF1ADQ8N9N8 165 aaKnown RBP16.08■□□□□ 0.16
RER1-202ENST00000378512 LRRN4CLQ8ND94 238 aa16.08■□□□□ 0.16
RER1-202ENST00000378512 OR51Q1Q8NH59 317 aa16.08■□□□□ 0.16
RER1-202ENST00000378512 DCAKDQ8WVC6 231 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms