RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 DNAJB13P59910 316 aa12.6□□□□□ -0.39
CKAP2-202ENST00000378034 SKP1P63208 163 aa12.6□□□□□ -0.39
CKAP2-202ENST00000378034 NCF4Q15080 339 aa12.6□□□□□ -0.39
CKAP2-202ENST00000378034 LCN10Q6JVE6 187 aa12.6□□□□□ -0.39
CKAP2-202ENST00000378034 FAM198BQ6UWH4 519 aa12.6□□□□□ -0.39
CKAP2-202ENST00000378034 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.6□□□□□ -0.39
CKAP2-202ENST00000378034 CCDC63Q8NA47 563 aa12.6□□□□□ -0.39
CKAP2-202ENST00000378034 CREB3L4Q8TEY5 395 aa12.6□□□□□ -0.39
CKAP2-202ENST00000378034 SNRNP27Q8WVK2 155 aaKnown RBP12.6□□□□□ -0.39
CKAP2-202ENST00000378034 REPS1Q96D71 796 aa12.6□□□□□ -0.39
CKAP2-202ENST00000378034 SLC6A16Q9GZN6 736 aa12.6□□□□□ -0.39
CKAP2-202ENST00000378034 PADI2Q9Y2J8 665 aa12.6□□□□□ -0.39
CKAP2-202ENST00000378034 PCDHGA11Q9Y5H2 935 aa12.6□□□□□ -0.39
CKAP2-202ENST00000378034 GOLGA6L10A6NI86 522 aa12.59□□□□□ -0.39
CKAP2-202ENST00000378034 ZNF891A8MT65 544 aaPredicted RBP12.59□□□□□ -0.39
CKAP2-202ENST00000378034 H0YIG0 161 aa12.59□□□□□ -0.39
CKAP2-202ENST00000378034 H0YIV9 168 aa12.59□□□□□ -0.39
CKAP2-202ENST00000378034 OR7A17O14581 309 aa12.59□□□□□ -0.39
CKAP2-202ENST00000378034 EFSO43281 561 aa12.59□□□□□ -0.39
CKAP2-202ENST00000378034 MED26O95402 600 aa12.59□□□□□ -0.39
CKAP2-202ENST00000378034 NSA2O95478 260 aaKnown RBP12.59□□□□□ -0.39
CKAP2-202ENST00000378034 OTCP00480 354 aa12.59□□□□□ -0.39
CKAP2-202ENST00000378034 SERPIND1P05546 499 aa12.59□□□□□ -0.39
CKAP2-202ENST00000378034 ITGAXP20702 1163 aa12.59□□□□□ -0.39
CKAP2-202ENST00000378034 AVPR1BP47901 424 aa12.59□□□□□ -0.39
CKAP2-202ENST00000378034 STXBP1P61764 594 aaKnown RBP12.59□□□□□ -0.39
CKAP2-202ENST00000378034 VAC14Q08AM6 782 aa12.59□□□□□ -0.39
CKAP2-202ENST00000378034 HERC3Q15034 1050 aa12.59□□□□□ -0.39
CKAP2-202ENST00000378034 UNC50Q53HI1 259 aa12.59□□□□□ -0.39
CKAP2-202ENST00000378034 C10orf62Q5T681 223 aaPredicted RBP12.59□□□□□ -0.39
CKAP2-202ENST00000378034 MRPL14Q6P1L8 145 aaKnown RBP12.59□□□□□ -0.39
CKAP2-202ENST00000378034 ABHD13Q7L211 337 aa12.59□□□□□ -0.39
CKAP2-202ENST00000378034 OVCH1Q7RTY7 1134 aa12.59□□□□□ -0.39
CKAP2-202ENST00000378034 AFAP1L2Q8N4X5 818 aa12.59□□□□□ -0.39
CKAP2-202ENST00000378034 KCT2Q8NC54 265 aa12.59□□□□□ -0.39
CKAP2-202ENST00000378034 TMEM237Q96Q45 408 aa12.59□□□□□ -0.39
CKAP2-202ENST00000378034 SLC26A1Q9H2B4 701 aa12.59□□□□□ -0.39
CKAP2-202ENST00000378034 CENPHQ9H3R5 247 aa12.59□□□□□ -0.39
CKAP2-202ENST00000378034 CLK4Q9HAZ1 481 aaKnown RBP12.59□□□□□ -0.39
CKAP2-202ENST00000378034 ANKHQ9HCJ1 492 aa12.59□□□□□ -0.39
CKAP2-202ENST00000378034 ZBTB26Q9HCK0 441 aa12.59□□□□□ -0.39
CKAP2-202ENST00000378034 OXSMQ9NWU1 459 aa12.59□□□□□ -0.39
CKAP2-202ENST00000378034 FER1L5A0AVI2 2057 aa12.58□□□□□ -0.4
CKAP2-202ENST00000378034 K7ENP7 123 aa12.58□□□□□ -0.4
CKAP2-202ENST00000378034 FOXS1O43638 330 aa12.58□□□□□ -0.4
CKAP2-202ENST00000378034 TYROBPO43914 113 aa12.58□□□□□ -0.4
CKAP2-202ENST00000378034 SUPT7LO94864 414 aa12.58□□□□□ -0.4
CKAP2-202ENST00000378034 MLYCDO95822 493 aa12.58□□□□□ -0.4
CKAP2-202ENST00000378034 CLCQ05315 142 aa12.58□□□□□ -0.4
CKAP2-202ENST00000378034 ASPHQ12797 758 aa12.58□□□□□ -0.4
CKAP2-202ENST00000378034 DSG2Q14126 1118 aa12.58□□□□□ -0.4
CKAP2-202ENST00000378034 GGTA1PQ4G0N0 100 aa12.58□□□□□ -0.4
CKAP2-202ENST00000378034 INO80CQ6PI98 192 aaPredicted RBP12.58□□□□□ -0.4
CKAP2-202ENST00000378034 SYVN1Q86TM6 617 aa12.58□□□□□ -0.4
CKAP2-202ENST00000378034 EXOC3L1Q86VI1 746 aa12.58□□□□□ -0.4
CKAP2-202ENST00000378034 ENDOVQ8N8Q3 282 aaKnown RBP12.58□□□□□ -0.4
CKAP2-202ENST00000378034 OR7G3Q8NG95 312 aa12.58□□□□□ -0.4
CKAP2-202ENST00000378034 COL26A1Q96A83 441 aa12.58□□□□□ -0.4
CKAP2-202ENST00000378034 MOCOSQ96EN8 888 aa12.58□□□□□ -0.4
CKAP2-202ENST00000378034 MACROD1Q9BQ69 325 aa12.58□□□□□ -0.4
CKAP2-202ENST00000378034 WDR54Q9H977 334 aa12.58□□□□□ -0.4
CKAP2-202ENST00000378034 SEMA4BQ9NPR2 832 aaPredicted RBP12.58□□□□□ -0.4
CKAP2-202ENST00000378034 SLC22A11Q9NSA0 550 aa12.58□□□□□ -0.4
CKAP2-202ENST00000378034 IL17BQ9UHF5 180 aa12.58□□□□□ -0.4
CKAP2-202ENST00000378034 NXT1Q9UKK6 140 aaKnown RBP12.58□□□□□ -0.4
CKAP2-202ENST00000378034 SEC16AO15027 2179 aa12.58□□□□□ -0.4
CKAP2-202ENST00000378034 H3BQF6 201 aa12.58□□□□□ -0.4
CKAP2-202ENST00000378034 SPAG7O75391 227 aa12.58□□□□□ -0.4
CKAP2-202ENST00000378034 CREG1O75629 220 aa12.58□□□□□ -0.4
CKAP2-202ENST00000378034 STATHP02808 62 aa12.58□□□□□ -0.4
CKAP2-202ENST00000378034 ALOX12P18054 663 aa12.58□□□□□ -0.4
CKAP2-202ENST00000378034 FBLP22087 321 aaKnown RBP12.58□□□□□ -0.4
CKAP2-202ENST00000378034 F8A1P23610 371 aa12.58□□□□□ -0.4
CKAP2-202ENST00000378034 PIK3CBP42338 1070 aa12.58□□□□□ -0.4
CKAP2-202ENST00000378034 OR1D4P47884 311 aa12.58□□□□□ -0.4
CKAP2-202ENST00000378034 CYP4F2P78329 520 aa12.58□□□□□ -0.4
CKAP2-202ENST00000378034 PHEXP78562 749 aa12.58□□□□□ -0.4
CKAP2-202ENST00000378034 HYAL2Q12891 473 aa12.58□□□□□ -0.4
CKAP2-202ENST00000378034 TRAF3Q13114 568 aa12.58□□□□□ -0.4
CKAP2-202ENST00000378034 ADPRMQ3LIE5 342 aa12.58□□□□□ -0.4
CKAP2-202ENST00000378034 ARHGAP40Q5TG30 622 aa12.58□□□□□ -0.4
CKAP2-202ENST00000378034 MLIPQ5VWP3 458 aa12.58□□□□□ -0.4
CKAP2-202ENST00000378034 HDXQ7Z353 690 aa12.58□□□□□ -0.4
CKAP2-202ENST00000378034 MILR1Q7Z6M3 343 aa12.58□□□□□ -0.4
CKAP2-202ENST00000378034 MYLK4Q86YV6 388 aaPredicted RBP12.58□□□□□ -0.4
CKAP2-202ENST00000378034 ARMC2Q8NEN0 867 aa12.58□□□□□ -0.4
CKAP2-202ENST00000378034 OR52B6Q8NGF0 335 aa12.58□□□□□ -0.4
CKAP2-202ENST00000378034 TCP10LQ8TDR4 215 aa12.58□□□□□ -0.4
CKAP2-202ENST00000378034 STARD8Q92502 1023 aa12.58□□□□□ -0.4
CKAP2-202ENST00000378034 MMABQ96EY8 250 aaPredicted RBP12.58□□□□□ -0.4
CKAP2-202ENST00000378034 NSUN5Q96P11 429 aaKnown RBP12.58□□□□□ -0.4
CKAP2-202ENST00000378034 ACTL8Q9H568 366 aa12.58□□□□□ -0.4
CKAP2-202ENST00000378034 PSD3Q9NYI0 1048 aa12.58□□□□□ -0.4
CKAP2-202ENST00000378034 A0A0A6YYC8 382 aaPredicted RBP12.57□□□□□ -0.4
CKAP2-202ENST00000378034 LRIT2A6NDA9 550 aa12.57□□□□□ -0.4
CKAP2-202ENST00000378034 I3L1I5 382 aaPredicted RBP12.57□□□□□ -0.4
CKAP2-202ENST00000378034 SMIM10L1P0DMW3 83 aa12.57□□□□□ -0.4
CKAP2-202ENST00000378034 ARL1P40616 181 aaPredicted RBP12.57□□□□□ -0.4
CKAP2-202ENST00000378034 SRSF6Q13247 344 aaKnown RBP12.57□□□□□ -0.4
CKAP2-202ENST00000378034 RBBP7Q16576 425 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms