RNA–Protein interactions for RNA: ENST00000376854.5

C9orf40-201, Transcript of chromosome 9 open reading frame 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf40, Length 2,327 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40-201ENST00000376854 BRAT1Q6PJG6 821 aa24.36■■□□□ 1.49
C9orf40-201ENST00000376854 PAGE2Q7Z2X7 111 aa24.36■■□□□ 1.49
C9orf40-201ENST00000376854 TMEM25Q86YD3 366 aa24.36■■□□□ 1.49
C9orf40-201ENST00000376854 OR7G3Q8NG95 312 aa24.36■■□□□ 1.49
C9orf40-201ENST00000376854 OR2A12Q8NGT7 310 aa24.36■■□□□ 1.49
C9orf40-201ENST00000376854 HUS1BQ8NHY5 278 aa24.36■■□□□ 1.49
C9orf40-201ENST00000376854 CHTF18Q8WVB6 975 aa24.36■■□□□ 1.49
C9orf40-201ENST00000376854 TMEM159Q96B96 161 aa24.36■■□□□ 1.49
C9orf40-201ENST00000376854 COQ8BQ96D53 544 aa24.36■■□□□ 1.49
C9orf40-201ENST00000376854 ZHX1-C8orf76Q96EF9 292 aa24.36■■□□□ 1.49
C9orf40-201ENST00000376854 RIOK2Q9BVS4 552 aaKnown RBP24.36■■□□□ 1.49
C9orf40-201ENST00000376854 TNFRSF11BO00300 401 aa24.35■■□□□ 1.49
C9orf40-201ENST00000376854 PCDH7O60245 1069 aa24.35■■□□□ 1.49
C9orf40-201ENST00000376854 GCM2O75603 506 aaPredicted RBP24.35■■□□□ 1.49
C9orf40-201ENST00000376854 DCDC1P59894 354 aa24.35■■□□□ 1.49
C9orf40-201ENST00000376854 TEAD4Q15561 434 aa24.35■■□□□ 1.49
C9orf40-201ENST00000376854 SPIN4Q56A73 249 aa24.35■■□□□ 1.49
C9orf40-201ENST00000376854 ANGPTL8Q6UXH0 198 aa24.35■■□□□ 1.49
C9orf40-201ENST00000376854 TSEN54Q7Z6J9 526 aaKnown RBP24.35■■□□□ 1.49
C9orf40-201ENST00000376854 LILRA3Q8N6C8 439 aaPredicted RBP24.35■■□□□ 1.49
C9orf40-201ENST00000376854 SLC46A2Q9BY10 475 aa24.35■■□□□ 1.49
C9orf40-201ENST00000376854 RAPGEFL1Q9UHV5 662 aa24.35■■□□□ 1.49
C9orf40-201ENST00000376854 OSGIN1Q9UJX0 560 aa24.35■■□□□ 1.49
C9orf40-201ENST00000376854 MAPRE3Q9UPY8 281 aa24.35■■□□□ 1.49
C9orf40-201ENST00000376854 LYVE1Q9Y5Y7 322 aa24.35■■□□□ 1.49
C9orf40-201ENST00000376854 AP1M2Q9Y6Q5 423 aa24.35■■□□□ 1.49
C9orf40-201ENST00000376854 FADS2P1A8MWK0 482 aa24.35■■□□□ 1.49
C9orf40-201ENST00000376854 SLC16A8O95907 504 aa24.35■■□□□ 1.49
C9orf40-201ENST00000376854 CRATP43155 626 aa24.35■■□□□ 1.49
C9orf40-201ENST00000376854 MYLIPQ8WY64 445 aa24.35■■□□□ 1.49
C9orf40-201ENST00000376854 SLC38A4Q969I6 547 aa24.35■■□□□ 1.49
C9orf40-201ENST00000376854 FEVQ99581 238 aa24.35■■□□□ 1.49
C9orf40-201ENST00000376854 TMEM184CQ9NVA4 438 aa24.35■■□□□ 1.49
C9orf40-201ENST00000376854 NDUFAF4Q9P032 175 aa24.35■■□□□ 1.49
C9orf40-201ENST00000376854 ZNF282Q9UDV7 671 aaPredicted RBP24.35■■□□□ 1.49
C9orf40-201ENST00000376854 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP24.35■■□□□ 1.49
C9orf40-201ENST00000376854 MAFFQ9ULX9 164 aa24.35■■□□□ 1.49
C9orf40-201ENST00000376854 MYOFQ9NZM1 2061 aa24.35■■□□□ 1.49
C9orf40-201ENST00000376854 NEDD8-MDP1E9PL57 170 aa24.34■■□□□ 1.49
C9orf40-201ENST00000376854 LRG1P02750 347 aa24.34■■□□□ 1.49
C9orf40-201ENST00000376854 CATP04040 527 aaKnown RBP24.34■■□□□ 1.49
C9orf40-201ENST00000376854 IMPA1P29218 277 aa24.34■■□□□ 1.49
C9orf40-201ENST00000376854 RXRGP48443 463 aa24.34■■□□□ 1.49
C9orf40-201ENST00000376854 SELENOWP63302 87 aa24.34■■□□□ 1.49
C9orf40-201ENST00000376854 FPGSQ05932 587 aa24.34■■□□□ 1.49
C9orf40-201ENST00000376854 SYT16Q17RD7 645 aa24.34■■□□□ 1.49
C9orf40-201ENST00000376854 TRAM1L1Q8N609 369 aa24.34■■□□□ 1.49
C9orf40-201ENST00000376854 FCGR1BQ92637 280 aa24.34■■□□□ 1.49
C9orf40-201ENST00000376854 TIFAQ96CG3 184 aa24.34■■□□□ 1.49
C9orf40-201ENST00000376854 PKP4Q99569 1192 aa24.34■■□□□ 1.49
C9orf40-201ENST00000376854 LILRB3O75022 631 aa24.34■■□□□ 1.49
C9orf40-201ENST00000376854 RFPL2O75678 378 aa24.34■■□□□ 1.49
C9orf40-201ENST00000376854 OPN1SWP03999 348 aa24.34■■□□□ 1.49
C9orf40-201ENST00000376854 PABPC1P11940 636 aaKnown RBP24.34■■□□□ 1.49
C9orf40-201ENST00000376854 TIA1P31483 386 aaKnown RBP eCLIP24.34■■□□□ 1.49
C9orf40-201ENST00000376854 GGT2P36268 569 aa24.34■■□□□ 1.49
C9orf40-201ENST00000376854 LIPAP38571 399 aa24.34■■□□□ 1.49
C9orf40-201ENST00000376854 RECQLP46063 649 aaPredicted RBP24.34■■□□□ 1.49
C9orf40-201ENST00000376854 CLK1P49759 484 aaKnown RBP24.34■■□□□ 1.49
C9orf40-201ENST00000376854 MNX1P50219 401 aaPredicted RBP24.34■■□□□ 1.49
C9orf40-201ENST00000376854 CTSCP53634 463 aa24.34■■□□□ 1.49
C9orf40-201ENST00000376854 CASP9P55211 416 aa24.34■■□□□ 1.49
C9orf40-201ENST00000376854 ELP6Q0PNE2 266 aa24.34■■□□□ 1.49
C9orf40-201ENST00000376854 PROX1Q92786 737 aa24.34■■□□□ 1.49
C9orf40-201ENST00000376854 ITPKCQ96DU7 683 aa24.34■■□□□ 1.49
C9orf40-201ENST00000376854 GIN1Q9NXP7 522 aa24.34■■□□□ 1.49
C9orf40-201ENST00000376854 CCL26Q9Y258 94 aa24.34■■□□□ 1.49
C9orf40-201ENST00000376854 ATP11BQ9Y2G3 1177 aa24.34■■□□□ 1.49
C9orf40-201ENST00000376854 DOCK6Q96HP0 2047 aa24.34■■□□□ 1.49
C9orf40-201ENST00000376854 RNASET2O00584 256 aaKnown RBP24.33■■□□□ 1.49
C9orf40-201ENST00000376854 ADAMDEC1O15204 470 aa24.33■■□□□ 1.49
C9orf40-201ENST00000376854 ALOX5P09917 674 aa24.33■■□□□ 1.49
C9orf40-201ENST00000376854 LAG3P18627 525 aa24.33■■□□□ 1.49
C9orf40-201ENST00000376854 TNFRSF1BP20333 461 aa24.33■■□□□ 1.49
C9orf40-201ENST00000376854 TGM1P22735 817 aa24.33■■□□□ 1.49
C9orf40-201ENST00000376854 C21orf33P30042 268 aaPredicted RBP24.33■■□□□ 1.49
C9orf40-201ENST00000376854 RPS13P62277 151 aaKnown RBP24.33■■□□□ 1.49
C9orf40-201ENST00000376854 PPIGQ13427 754 aaKnown RBP eCLIP24.33■■□□□ 1.49
C9orf40-201ENST00000376854 OR56A3Q8NH54 315 aa24.33■■□□□ 1.49
C9orf40-201ENST00000376854 DSN1Q9H410 356 aa24.33■■□□□ 1.49
C9orf40-201ENST00000376854 PSORS1C1Q9UIG5 152 aa24.33■■□□□ 1.49
C9orf40-201ENST00000376854 TBX21Q9UL17 535 aa24.33■■□□□ 1.49
C9orf40-201ENST00000376854 CTSAP10619 480 aa24.33■■□□□ 1.48
C9orf40-201ENST00000376854 RPS3AP61247 264 aaKnown RBP24.33■■□□□ 1.48
C9orf40-201ENST00000376854 PCDH1Q08174 1060 aa24.33■■□□□ 1.48
C9orf40-201ENST00000376854 DNASE1L3Q13609 305 aa24.33■■□□□ 1.48
C9orf40-201ENST00000376854 PRSS36Q5K4E3 855 aa24.33■■□□□ 1.48
C9orf40-201ENST00000376854 HENMT1Q5T8I9 393 aaKnown RBP24.33■■□□□ 1.48
C9orf40-201ENST00000376854 KLHDC8AQ8IYD2 350 aa24.33■■□□□ 1.48
C9orf40-201ENST00000376854 SLC5A8Q8N695 610 aa24.33■■□□□ 1.48
C9orf40-201ENST00000376854 RASGEF1AQ8N9B8 481 aa24.33■■□□□ 1.48
C9orf40-201ENST00000376854 DCSTAMPQ9H295 470 aa24.33■■□□□ 1.48
C9orf40-201ENST00000376854 INIPQ9NRY2 104 aa24.33■■□□□ 1.48
C9orf40-201ENST00000376854 WASH3PC4AMC7 463 aa24.32■■□□□ 1.48
C9orf40-201ENST00000376854 QSOX1O00391 747 aa24.32■■□□□ 1.48
C9orf40-201ENST00000376854 CCL5P13501 91 aa24.32■■□□□ 1.48
C9orf40-201ENST00000376854 ETFAP13804 333 aa24.32■■□□□ 1.48
C9orf40-201ENST00000376854 ZNF385BQ569K4 471 aa24.32■■□□□ 1.48
C9orf40-201ENST00000376854 COX20Q5RI15 118 aa24.32■■□□□ 1.48
C9orf40-201ENST00000376854 ZNF852Q6ZMS4 543 aa24.32■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms