RNA–Protein interactions for RNA: ENST00000376839.7

ACTN1-202, Transcript of actinin alpha 1, humanhuman

TSL 2 BASIC

Gene ACTN1, Length 2,824 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-202ENST00000376839 CSNK2BP67870 215 aa12.73□□□□□ -0.37
ACTN1-202ENST00000376839 TUBA1BP68363 451 aa12.73□□□□□ -0.37
ACTN1-202ENST00000376839 CDC20Q12834 499 aa12.73□□□□□ -0.37
ACTN1-202ENST00000376839 NAE1Q13564 534 aa12.73□□□□□ -0.37
ACTN1-202ENST00000376839 ZNF385BQ569K4 471 aa12.73□□□□□ -0.37
ACTN1-202ENST00000376839 PLEKHS1Q5SXH7 462 aa12.73□□□□□ -0.37
ACTN1-202ENST00000376839 TUBA1AQ71U36 451 aa12.73□□□□□ -0.37
ACTN1-202ENST00000376839 LACC1Q8IV20 430 aa12.73□□□□□ -0.37
ACTN1-202ENST00000376839 AUTS2Q8WXX7 1259 aa12.73□□□□□ -0.37
ACTN1-202ENST00000376839 IL21Q9HBE4 155 aa12.73□□□□□ -0.37
ACTN1-202ENST00000376839 PLCXD1Q9NUJ7 323 aa12.73□□□□□ -0.37
ACTN1-202ENST00000376839 FKBP14Q9NWM8 211 aa12.73□□□□□ -0.37
ACTN1-202ENST00000376839 SPASTQ9UBP0 616 aa12.73□□□□□ -0.37
ACTN1-202ENST00000376839 CAB39Q9Y376 341 aaPredicted RBP12.73□□□□□ -0.37
ACTN1-202ENST00000376839 PCDHGA2Q9Y5H1 932 aa12.73□□□□□ -0.37
ACTN1-202ENST00000376839 OR2AG2A6NM03 316 aa12.73□□□□□ -0.37
ACTN1-202ENST00000376839 SLC16A5O15375 505 aa12.73□□□□□ -0.37
ACTN1-202ENST00000376839 ADORA3P0DMS8 318 aa12.73□□□□□ -0.37
ACTN1-202ENST00000376839 IDSP22304 550 aa12.73□□□□□ -0.37
ACTN1-202ENST00000376839 CDH12P55289 794 aa12.73□□□□□ -0.37
ACTN1-202ENST00000376839 C21orf58P58505 322 aa12.73□□□□□ -0.37
ACTN1-202ENST00000376839 SNRPD1P62314 119 aaKnown RBP12.73□□□□□ -0.37
ACTN1-202ENST00000376839 FOXD4Q12950 439 aaPredicted RBP12.73□□□□□ -0.37
ACTN1-202ENST00000376839 HS6ST3Q8IZP7 471 aa12.73□□□□□ -0.37
ACTN1-202ENST00000376839 LILRA3Q8N6C8 439 aaPredicted RBP12.73□□□□□ -0.37
ACTN1-202ENST00000376839 OR4K1Q8NGD4 311 aa12.73□□□□□ -0.37
ACTN1-202ENST00000376839 OR9Q2Q8NGE9 314 aa12.73□□□□□ -0.37
ACTN1-202ENST00000376839 OR4A15Q8NGL6 344 aa12.73□□□□□ -0.37
ACTN1-202ENST00000376839 MYDGFQ969H8 173 aa12.73□□□□□ -0.37
ACTN1-202ENST00000376839 SAMD11Q96NU1 681 aa12.73□□□□□ -0.37
ACTN1-202ENST00000376839 CENPOQ9BU64 300 aa12.73□□□□□ -0.37
ACTN1-202ENST00000376839 SP140LQ9H930 580 aa12.73□□□□□ -0.37
ACTN1-202ENST00000376839 SGK2Q9HBY8 427 aa12.73□□□□□ -0.37
ACTN1-202ENST00000376839 CPNE5Q9HCH3 593 aa12.73□□□□□ -0.37
ACTN1-202ENST00000376839 SH3BP4Q9P0V3 963 aa12.73□□□□□ -0.37
ACTN1-202ENST00000376839 CFAP97Q9P2B7 532 aa12.73□□□□□ -0.37
ACTN1-202ENST00000376839 BTNL2Q9UIR0 455 aa12.73□□□□□ -0.37
ACTN1-202ENST00000376839 EXO1Q9UQ84 846 aaKnown RBP12.73□□□□□ -0.37
ACTN1-202ENST00000376839 J3KTA2 159 aa12.72□□□□□ -0.37
ACTN1-202ENST00000376839 NRG2O14511 850 aaPredicted RBP12.72□□□□□ -0.37
ACTN1-202ENST00000376839 HOXA2O43364 376 aa12.72□□□□□ -0.37
ACTN1-202ENST00000376839 DLGAP3O95886 979 aa12.72□□□□□ -0.37
ACTN1-202ENST00000376839 OLFM2O95897 454 aa12.72□□□□□ -0.37
ACTN1-202ENST00000376839 PCSK2P16519 638 aa12.72□□□□□ -0.37
ACTN1-202ENST00000376839 CRATP43155 626 aa12.72□□□□□ -0.37
ACTN1-202ENST00000376839 MVDP53602 400 aa12.72□□□□□ -0.37
ACTN1-202ENST00000376839 SELENOWP63302 87 aa12.72□□□□□ -0.37
ACTN1-202ENST00000376839 SPIBQ01892 262 aa12.72□□□□□ -0.37
ACTN1-202ENST00000376839 SREBF2Q12772 1141 aa12.72□□□□□ -0.37
ACTN1-202ENST00000376839 EXOC3L2Q2M3D2 409 aa12.72□□□□□ -0.37
ACTN1-202ENST00000376839 TPRG1LQ5T0D9 272 aa12.72□□□□□ -0.37
ACTN1-202ENST00000376839 C22orf39Q6P5X5 142 aa12.72□□□□□ -0.37
ACTN1-202ENST00000376839 DPY19L3Q6ZPD9 716 aa12.72□□□□□ -0.37
ACTN1-202ENST00000376839 USP43Q70EL4 1123 aa12.72□□□□□ -0.37
ACTN1-202ENST00000376839 C11orf65Q8NCR3 313 aa12.72□□□□□ -0.37
ACTN1-202ENST00000376839 OR4C15Q8NGM1 316 aa12.72□□□□□ -0.37
ACTN1-202ENST00000376839 UTP15Q8TED0 518 aaKnown RBP12.72□□□□□ -0.37
ACTN1-202ENST00000376839 SCLYQ96I15 445 aa12.72□□□□□ -0.37
ACTN1-202ENST00000376839 Q96MT0 163 aa12.72□□□□□ -0.37
ACTN1-202ENST00000376839 PPIL1Q9Y3C6 166 aa12.72□□□□□ -0.37
ACTN1-202ENST00000376839 PRRC2BQ5JSZ5 2229 aaKnown RBP12.72□□□□□ -0.37
ACTN1-202ENST00000376839 TAF4O00268 1085 aa12.72□□□□□ -0.37
ACTN1-202ENST00000376839 DNTTP04053 509 aa12.72□□□□□ -0.37
ACTN1-202ENST00000376839 ADRA2AP08913 450 aa12.72□□□□□ -0.37
ACTN1-202ENST00000376839 GABRB1P18505 474 aa12.72□□□□□ -0.37
ACTN1-202ENST00000376839 ZNF362Q5T0B9 420 aaPredicted RBP12.72□□□□□ -0.37
ACTN1-202ENST00000376839 CMTM8Q8IZV2 173 aa12.72□□□□□ -0.37
ACTN1-202ENST00000376839 LGI4Q8N135 537 aa12.72□□□□□ -0.37
ACTN1-202ENST00000376839 PARP16Q8N5Y8 322 aa12.72□□□□□ -0.37
ACTN1-202ENST00000376839 CHST14Q8NCH0 376 aa12.72□□□□□ -0.37
ACTN1-202ENST00000376839 CHCHD6Q9BRQ6 235 aa12.72□□□□□ -0.37
ACTN1-202ENST00000376839 SPATA9Q9BWV2 254 aa12.72□□□□□ -0.37
ACTN1-202ENST00000376839 TMEM121BQ9BXQ6 578 aaPredicted RBP12.72□□□□□ -0.37
ACTN1-202ENST00000376839 ITM2CQ9NQX7 267 aa12.72□□□□□ -0.37
ACTN1-202ENST00000376839 ACSL6Q9UKU0 697 aa12.72□□□□□ -0.37
ACTN1-202ENST00000376839 MYOFQ9NZM1 2061 aa12.72□□□□□ -0.37
ACTN1-202ENST00000376839 ISPDA4D126 451 aa12.71□□□□□ -0.37
ACTN1-202ENST00000376839 UGDHO60701 494 aa12.71□□□□□ -0.37
ACTN1-202ENST00000376839 GBAP04062 536 aa12.71□□□□□ -0.37
ACTN1-202ENST00000376839 RPLP0P05388 317 aaKnown RBP12.71□□□□□ -0.37
ACTN1-202ENST00000376839 CKMP06732 381 aa12.71□□□□□ -0.37
ACTN1-202ENST00000376839 POU2F1P14859 743 aa12.71□□□□□ -0.37
ACTN1-202ENST00000376839 BDKRB1P46663 353 aa12.71□□□□□ -0.37
ACTN1-202ENST00000376839 PXNP49023 591 aaPredicted RBP12.71□□□□□ -0.37
ACTN1-202ENST00000376839 ZNF181Q2M3W8 571 aa12.71□□□□□ -0.37
ACTN1-202ENST00000376839 ARMCX4Q5H9R4 360 aa12.71□□□□□ -0.37
ACTN1-202ENST00000376839 ATAD3BQ5T9A4 648 aa12.71□□□□□ -0.37
ACTN1-202ENST00000376839 MLIPQ5VWP3 458 aa12.71□□□□□ -0.37
ACTN1-202ENST00000376839 TPGS2Q68CL5 300 aa12.71□□□□□ -0.37
ACTN1-202ENST00000376839 GRHL2Q6ISB3 625 aa12.71□□□□□ -0.37
ACTN1-202ENST00000376839 AGTRAPQ6RW13 159 aa12.71□□□□□ -0.37
ACTN1-202ENST00000376839 RASGRP3Q8IV61 690 aa12.71□□□□□ -0.37
ACTN1-202ENST00000376839 SYTL1Q8IYJ3 562 aa12.71□□□□□ -0.37
ACTN1-202ENST00000376839 SCAIQ8N9R8 606 aa12.71□□□□□ -0.37
ACTN1-202ENST00000376839 HUS1BQ8NHY5 278 aa12.71□□□□□ -0.37
ACTN1-202ENST00000376839 FIBINQ8TAL6 211 aa12.71□□□□□ -0.37
ACTN1-202ENST00000376839 MYLIPQ8WY64 445 aa12.71□□□□□ -0.37
ACTN1-202ENST00000376839 CCM2Q9BSQ5 444 aa12.71□□□□□ -0.37
ACTN1-202ENST00000376839 NXF2Q9GZY0 626 aaKnown RBP12.71□□□□□ -0.37
ACTN1-202ENST00000376839 STOX2Q9P2F5 926 aaPredicted RBP12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms