RNA–Protein interactions for RNA: ENST00000376656.8

TRIM39-201, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 2 BASIC

Gene TRIM39, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-201ENST00000376656 PRPH2P23942 346 aa15.91■□□□□ 0.14
TRIM39-201ENST00000376656 NFATC2Q13469 925 aa15.91■□□□□ 0.14
TRIM39-201ENST00000376656 DSC3Q14574 896 aa15.91■□□□□ 0.14
TRIM39-201ENST00000376656 FAM217AQ8IXS0 508 aa15.91■□□□□ 0.14
TRIM39-201ENST00000376656 OPALINQ96PE5 141 aa15.91■□□□□ 0.14
TRIM39-201ENST00000376656 SRRQ9GZT4 340 aa15.91■□□□□ 0.14
TRIM39-201ENST00000376656 CHST8Q9H2A9 424 aa15.91■□□□□ 0.14
TRIM39-201ENST00000376656 CRISPLD1Q9H336 500 aa15.91■□□□□ 0.14
TRIM39-201ENST00000376656 RPRD1BQ9NQG5 326 aaKnown RBP15.91■□□□□ 0.14
TRIM39-201ENST00000376656 SOX3P41225 446 aa15.91■□□□□ 0.14
TRIM39-201ENST00000376656 CYP27C1Q4G0S4 372 aa15.91■□□□□ 0.14
TRIM39-201ENST00000376656 ATXN7L2Q5T6C5 722 aaPredicted RBP15.91■□□□□ 0.14
TRIM39-201ENST00000376656 C9orf43Q8TAL5 461 aaPredicted RBP15.91■□□□□ 0.14
TRIM39-201ENST00000376656 CLIP3Q96DZ5 547 aa15.91■□□□□ 0.14
TRIM39-201ENST00000376656 PRG3Q9Y2Y8 225 aaPredicted RBP15.91■□□□□ 0.14
TRIM39-201ENST00000376656 TRPM7Q96QT4 1865 aa15.9■□□□□ 0.14
TRIM39-201ENST00000376656 ADAMDEC1O15204 470 aa15.9■□□□□ 0.14
TRIM39-201ENST00000376656 YES1P07947 543 aa15.9■□□□□ 0.14
TRIM39-201ENST00000376656 ANXA8P13928 327 aa15.9■□□□□ 0.14
TRIM39-201ENST00000376656 DGKEP52429 567 aa15.9■□□□□ 0.14
TRIM39-201ENST00000376656 SRSF11Q05519 484 aaKnown RBP15.9■□□□□ 0.14
TRIM39-201ENST00000376656 HYAL2Q12891 473 aa15.9■□□□□ 0.14
TRIM39-201ENST00000376656 RNF219Q5W0B1 726 aaPredicted RBP15.9■□□□□ 0.14
TRIM39-201ENST00000376656 METTL2BQ6P1Q9 378 aaKnown RBP15.9■□□□□ 0.14
TRIM39-201ENST00000376656 DENND1CQ8IV53 801 aa15.9■□□□□ 0.14
TRIM39-201ENST00000376656 BRI3BPQ8WY22 251 aa15.9■□□□□ 0.14
TRIM39-201ENST00000376656 SEPT5Q99719 369 aaPredicted RBP15.9■□□□□ 0.14
TRIM39-201ENST00000376656 HHATLQ9HCP6 504 aa15.9■□□□□ 0.14
TRIM39-201ENST00000376656 SNTG1Q9NSN8 517 aa15.9■□□□□ 0.14
TRIM39-201ENST00000376656 GPLD1P80108 840 aa15.9■□□□□ 0.14
TRIM39-201ENST00000376656 CD83Q01151 205 aa15.9■□□□□ 0.14
TRIM39-201ENST00000376656 MGAT3Q09327 533 aa15.9■□□□□ 0.14
TRIM39-201ENST00000376656 BOP1Q14137 746 aaKnown RBP15.9■□□□□ 0.14
TRIM39-201ENST00000376656 GPAT3Q53EU6 434 aa15.9■□□□□ 0.14
TRIM39-201ENST00000376656 NAGSQ8N159 534 aa15.9■□□□□ 0.14
TRIM39-201ENST00000376656 RASSF5Q8WWW0 418 aa15.9■□□□□ 0.14
TRIM39-201ENST00000376656 GTPBP3Q969Y2 492 aaKnown RBP15.9■□□□□ 0.14
TRIM39-201ENST00000376656 TRMT61AQ96FX7 289 aaKnown RBP15.9■□□□□ 0.14
TRIM39-201ENST00000376656 MS4A4AQ96JQ5 239 aa15.9■□□□□ 0.14
TRIM39-201ENST00000376656 COPS8Q99627 209 aa15.9■□□□□ 0.14
TRIM39-201ENST00000376656 PRRG3Q9BZD7 231 aa15.9■□□□□ 0.14
TRIM39-201ENST00000376656 IL26Q9NPH9 171 aa15.9■□□□□ 0.14
TRIM39-201ENST00000376656 PRAMEF25A6NGN4 478 aa15.89■□□□□ 0.13
TRIM39-201ENST00000376656 J3KTA2 159 aa15.89■□□□□ 0.13
TRIM39-201ENST00000376656 PCDH7O60245 1069 aa15.89■□□□□ 0.13
TRIM39-201ENST00000376656 TEKQ02763 1124 aa15.89■□□□□ 0.13
TRIM39-201ENST00000376656 MICAQ29983 383 aa15.89■□□□□ 0.13
TRIM39-201ENST00000376656 BBS7Q8IWZ6 715 aa15.89■□□□□ 0.13
TRIM39-201ENST00000376656 OR6K2Q8NGY2 324 aa15.89■□□□□ 0.13
TRIM39-201ENST00000376656 ALPK3Q96L96 1907 aa15.89■□□□□ 0.13
TRIM39-201ENST00000376656 FZD6O60353 706 aa15.89■□□□□ 0.13
TRIM39-201ENST00000376656 TRAPPC2P0DI81 140 aa15.89■□□□□ 0.13
TRIM39-201ENST00000376656 TRAPPC2BP0DI82 140 aa15.89■□□□□ 0.13
TRIM39-201ENST00000376656 ACRV1P26436 265 aa15.89■□□□□ 0.13
TRIM39-201ENST00000376656 RPS5P46782 204 aaKnown RBP15.89■□□□□ 0.13
TRIM39-201ENST00000376656 P2RX3P56373 397 aa15.89■□□□□ 0.13
TRIM39-201ENST00000376656 SELENOWP63302 87 aa15.89■□□□□ 0.13
TRIM39-201ENST00000376656 GAB1Q13480 694 aa15.89■□□□□ 0.13
TRIM39-201ENST00000376656 PTGES3Q15185 160 aaKnown RBP15.89■□□□□ 0.13
TRIM39-201ENST00000376656 TRAF7Q6Q0C0 670 aa15.89■□□□□ 0.13
TRIM39-201ENST00000376656 CSGALNACT1Q8TDX6 532 aa15.89■□□□□ 0.13
TRIM39-201ENST00000376656 SPATA17Q96L03 361 aa15.89■□□□□ 0.13
TRIM39-201ENST00000376656 FAM120CQ9NX05 1096 aaKnown RBP15.89■□□□□ 0.13
TRIM39-201ENST00000376656 LHX3Q9UBR4 397 aa15.89■□□□□ 0.13
TRIM39-201ENST00000376656 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.89■□□□□ 0.13
TRIM39-201ENST00000376656 A0A0B4J293 547 aa15.89■□□□□ 0.13
TRIM39-201ENST00000376656 A0A0G2JMP0 313 aa15.89■□□□□ 0.13
TRIM39-201ENST00000376656 CKMT1AP12532 417 aa15.89■□□□□ 0.13
TRIM39-201ENST00000376656 PSPHP78330 225 aa15.89■□□□□ 0.13
TRIM39-201ENST00000376656 ZNF177Q13360 481 aaPredicted RBP15.89■□□□□ 0.13
TRIM39-201ENST00000376656 RGNQ15493 299 aa15.89■□□□□ 0.13
TRIM39-201ENST00000376656 GGTA1PQ4G0N0 100 aa15.89■□□□□ 0.13
TRIM39-201ENST00000376656 FRG2Q64ET8 278 aa15.89■□□□□ 0.13
TRIM39-201ENST00000376656 RNF31Q96EP0 1072 aa15.89■□□□□ 0.13
TRIM39-201ENST00000376656 FRG2BQ96QU4 278 aa15.89■□□□□ 0.13
TRIM39-201ENST00000376656 ACOXLQ9NUZ1 547 aa15.89■□□□□ 0.13
TRIM39-201ENST00000376656 CRLS1Q9UJA2 301 aa15.89■□□□□ 0.13
TRIM39-201ENST00000376656 FCF1Q9Y324 198 aaKnown RBP15.89■□□□□ 0.13
TRIM39-201ENST00000376656 A8MX80 341 aa15.88■□□□□ 0.13
TRIM39-201ENST00000376656 PCDH17O14917 1159 aa15.88■□□□□ 0.13
TRIM39-201ENST00000376656 ABCB1P08183 1280 aaPredicted RBP15.88■□□□□ 0.13
TRIM39-201ENST00000376656 ITGALP20701 1170 aa15.88■□□□□ 0.13
TRIM39-201ENST00000376656 PTCHD3Q3KNS1 767 aa15.88■□□□□ 0.13
TRIM39-201ENST00000376656 CEP78Q5JTW2 689 aa15.88■□□□□ 0.13
TRIM39-201ENST00000376656 LDLRAD1Q5T700 205 aa15.88■□□□□ 0.13
TRIM39-201ENST00000376656 PLAG1Q6DJT9 500 aa15.88■□□□□ 0.13
TRIM39-201ENST00000376656 CXCL17Q6UXB2 119 aa15.88■□□□□ 0.13
TRIM39-201ENST00000376656 TRIM48Q8IWZ4 208 aa15.88■□□□□ 0.13
TRIM39-201ENST00000376656 UBE2J2Q8N2K1 259 aa15.88■□□□□ 0.13
TRIM39-201ENST00000376656 OR8J2Q8NGG1 315 aa15.88■□□□□ 0.13
TRIM39-201ENST00000376656 GRPEL2Q8TAA5 225 aa15.88■□□□□ 0.13
TRIM39-201ENST00000376656 FAM25AB3EWG3 89 aa15.88■□□□□ 0.13
TRIM39-201ENST00000376656 FAM25CB3EWG5 89 aa15.88■□□□□ 0.13
TRIM39-201ENST00000376656 FAM25GB3EWG6 89 aa15.88■□□□□ 0.13
TRIM39-201ENST00000376656 WWP2O00308 870 aa15.88■□□□□ 0.13
TRIM39-201ENST00000376656 CLDN11O75508 207 aa15.88■□□□□ 0.13
TRIM39-201ENST00000376656 CSF2P04141 144 aa15.88■□□□□ 0.13
TRIM39-201ENST00000376656 FHP07954 510 aa15.88■□□□□ 0.13
TRIM39-201ENST00000376656 ITPKAP23677 461 aa15.88■□□□□ 0.13
TRIM39-201ENST00000376656 THPOP40225 353 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms