RNA–Protein interactions for RNA: ENST00000375755.7

MSH5-204, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-204ENST00000375755 KIAA0355O15063 1070 aa12.48□□□□□ -0.41
MSH5-204ENST00000375755 CKMP06732 381 aa12.48□□□□□ -0.41
MSH5-204ENST00000375755 HSMCR30P0CW71 290 aa12.48□□□□□ -0.41
MSH5-204ENST00000375755 TRAPPC2P0DI81 140 aa12.48□□□□□ -0.41
MSH5-204ENST00000375755 TRAPPC2BP0DI82 140 aa12.48□□□□□ -0.41
MSH5-204ENST00000375755 AZGP1P25311 298 aaKnown RBP12.48□□□□□ -0.41
MSH5-204ENST00000375755 SOX6P35712 828 aa12.48□□□□□ -0.41
MSH5-204ENST00000375755 PIK3CGP48736 1102 aa12.48□□□□□ -0.41
MSH5-204ENST00000375755 CD83Q01151 205 aa12.48□□□□□ -0.41
MSH5-204ENST00000375755 GPR153Q6NV75 609 aa12.48□□□□□ -0.41
MSH5-204ENST00000375755 LIX1Q8N485 282 aa12.48□□□□□ -0.41
MSH5-204ENST00000375755 DNAJC22Q8N4W6 341 aa12.48□□□□□ -0.41
MSH5-204ENST00000375755 DTX3Q8N9I9 347 aa12.48□□□□□ -0.41
MSH5-204ENST00000375755 SIDT2Q8NBJ9 832 aaKnown RBP12.48□□□□□ -0.41
MSH5-204ENST00000375755 EEF1AKMT1Q8WVE0 214 aa12.48□□□□□ -0.41
MSH5-204ENST00000375755 SNAPC3Q92966 411 aa12.48□□□□□ -0.41
MSH5-204ENST00000375755 TCEAL4Q96EI5 215 aa12.48□□□□□ -0.41
MSH5-204ENST00000375755 PSKH2Q96QS6 385 aa12.48□□□□□ -0.41
MSH5-204ENST00000375755 MCCC1Q96RQ3 725 aaPredicted RBP12.48□□□□□ -0.41
MSH5-204ENST00000375755 GPR83Q9NYM4 423 aa12.48□□□□□ -0.41
MSH5-204ENST00000375755 ZMYM5Q9UJ78 669 aa12.48□□□□□ -0.41
MSH5-204ENST00000375755 KLHL20Q9Y2M5 609 aa12.48□□□□□ -0.41
MSH5-204ENST00000375755 E9PQ18 207 aa12.47□□□□□ -0.41
MSH5-204ENST00000375755 SMAD6O43541 496 aaKnown RBP12.47□□□□□ -0.41
MSH5-204ENST00000375755 ARHGEF15O94989 841 aa12.47□□□□□ -0.41
MSH5-204ENST00000375755 CR2P20023 1033 aa12.47□□□□□ -0.41
MSH5-204ENST00000375755 CAMK2GQ13555 558 aaPredicted RBP12.47□□□□□ -0.41
MSH5-204ENST00000375755 TAB1Q15750 504 aa12.47□□□□□ -0.41
MSH5-204ENST00000375755 PLPP4Q5VZY2 271 aa12.47□□□□□ -0.41
MSH5-204ENST00000375755 VTCN1Q7Z7D3 282 aa12.47□□□□□ -0.41
MSH5-204ENST00000375755 TMC8Q8IU68 726 aa12.47□□□□□ -0.41
MSH5-204ENST00000375755 LPCAT1Q8NF37 534 aa12.47□□□□□ -0.41
MSH5-204ENST00000375755 MYLIPQ8WY64 445 aa12.47□□□□□ -0.41
MSH5-204ENST00000375755 MYDGFQ969H8 173 aa12.47□□□□□ -0.41
MSH5-204ENST00000375755 TM6SF2Q9BZW4 377 aa12.47□□□□□ -0.41
MSH5-204ENST00000375755 C1QCP02747 245 aa12.47□□□□□ -0.41
MSH5-204ENST00000375755 C8AP07357 584 aa12.47□□□□□ -0.41
MSH5-204ENST00000375755 SYN1P17600 705 aa12.47□□□□□ -0.41
MSH5-204ENST00000375755 PKLRP30613 574 aa12.47□□□□□ -0.41
MSH5-204ENST00000375755 CSNK2BP67870 215 aa12.47□□□□□ -0.41
MSH5-204ENST00000375755 HMGCS1Q01581 520 aa12.47□□□□□ -0.41
MSH5-204ENST00000375755 SEMG2Q02383 582 aa12.47□□□□□ -0.41
MSH5-204ENST00000375755 GOLGA7Q7Z5G4 137 aa12.47□□□□□ -0.41
MSH5-204ENST00000375755 MILR1Q7Z6M3 343 aa12.47□□□□□ -0.41
MSH5-204ENST00000375755 PAF1Q8N7H5 531 aa12.47□□□□□ -0.41
MSH5-204ENST00000375755 TTC9Q92623 222 aa12.47□□□□□ -0.41
MSH5-204ENST00000375755 KCNC2Q96PR1 638 aa12.47□□□□□ -0.41
MSH5-204ENST00000375755 INPP5KQ9BT40 448 aa12.47□□□□□ -0.41
MSH5-204ENST00000375755 TAS2R16Q9NYV7 291 aa12.47□□□□□ -0.41
MSH5-204ENST00000375755 CFAP97Q9P2B7 532 aa12.47□□□□□ -0.41
MSH5-204ENST00000375755 CLCA1A8K7I4 914 aa12.46□□□□□ -0.41
MSH5-204ENST00000375755 TMCC2O75069 709 aa12.46□□□□□ -0.41
MSH5-204ENST00000375755 ZNF780AO75290 641 aaPredicted RBP12.46□□□□□ -0.41
MSH5-204ENST00000375755 NIPSNAP2O75323 286 aa12.46□□□□□ -0.41
MSH5-204ENST00000375755 CTSAP10619 480 aa12.46□□□□□ -0.41
MSH5-204ENST00000375755 MYOGP15173 224 aa12.46□□□□□ -0.41
MSH5-204ENST00000375755 TIE1P35590 1138 aa12.46□□□□□ -0.41
MSH5-204ENST00000375755 FCHO2Q0JRZ9 810 aa12.46□□□□□ -0.41
MSH5-204ENST00000375755 SLC14A1Q13336 389 aa12.46□□□□□ -0.41
MSH5-204ENST00000375755 PTPRNQ16849 979 aa12.46□□□□□ -0.41
MSH5-204ENST00000375755 CDONQ4KMG0 1287 aa12.46□□□□□ -0.41
MSH5-204ENST00000375755 FAHD1Q6P587 224 aa12.46□□□□□ -0.41
MSH5-204ENST00000375755 SUSD1Q6UWL2 747 aa12.46□□□□□ -0.41
MSH5-204ENST00000375755 NKAPQ8N5F7 415 aaKnown RBP12.46□□□□□ -0.41
MSH5-204ENST00000375755 EFHBQ8N7U6 833 aa12.46□□□□□ -0.41
MSH5-204ENST00000375755 GLB1L3Q8NCI6 653 aaPredicted RBP12.46□□□□□ -0.41
MSH5-204ENST00000375755 ST13P5Q8NFI4 369 aaPredicted RBP12.46□□□□□ -0.41
MSH5-204ENST00000375755 LINGO1Q96FE5 620 aa12.46□□□□□ -0.41
MSH5-204ENST00000375755 CDKN2AIPNLQ96HQ2 116 aa12.46□□□□□ -0.41
MSH5-204ENST00000375755 HRASLS5Q96KN8 279 aa12.46□□□□□ -0.41
MSH5-204ENST00000375755 TCF25Q9BQ70 676 aa12.46□□□□□ -0.41
MSH5-204ENST00000375755 FKBP14Q9NWM8 211 aa12.46□□□□□ -0.41
MSH5-204ENST00000375755 TSR3Q9UJK0 312 aaKnown RBP12.46□□□□□ -0.41
MSH5-204ENST00000375755 SPEF1Q9Y4P9 236 aa12.46□□□□□ -0.41
MSH5-204ENST00000375755 HCFC2Q9Y5Z7 792 aa12.46□□□□□ -0.41
MSH5-204ENST00000375755 A0A1W2PQ72 361 aa12.46□□□□□ -0.41
MSH5-204ENST00000375755 CDK2AP1O14519 115 aa12.46□□□□□ -0.41
MSH5-204ENST00000375755 FKBP9O95302 570 aa12.46□□□□□ -0.41
MSH5-204ENST00000375755 IL6P05231 212 aa12.46□□□□□ -0.41
MSH5-204ENST00000375755 EN2P19622 333 aaPredicted RBP12.46□□□□□ -0.41
MSH5-204ENST00000375755 RPS5P46782 204 aaKnown RBP12.46□□□□□ -0.41
MSH5-204ENST00000375755 Q6ZNB5 142 aa12.46□□□□□ -0.41
MSH5-204ENST00000375755 ANKRD46Q86W74 232 aa12.46□□□□□ -0.41
MSH5-204ENST00000375755 OR4K2Q8NGD2 314 aa12.46□□□□□ -0.41
MSH5-204ENST00000375755 PPP3R2Q96LZ3 170 aa12.46□□□□□ -0.41
MSH5-204ENST00000375755 GON7Q9BXV9 100 aa12.46□□□□□ -0.41
MSH5-204ENST00000375755 SLC46A2Q9BY10 475 aa12.46□□□□□ -0.41
MSH5-204ENST00000375755 SLC7A5P2Q9GIP4 190 aa12.46□□□□□ -0.41
MSH5-204ENST00000375755 CLMPQ9H6B4 373 aa12.46□□□□□ -0.41
MSH5-204ENST00000375755 SMURF1Q9HCE7 757 aa12.46□□□□□ -0.41
MSH5-204ENST00000375755 IL23AQ9NPF7 189 aa12.46□□□□□ -0.41
MSH5-204ENST00000375755 SERHLQ9NQF3 203 aa12.46□□□□□ -0.41
MSH5-204ENST00000375755 FARSBQ9NSD9 589 aaKnown RBP12.46□□□□□ -0.41
MSH5-204ENST00000375755 PLCXD1Q9NUJ7 323 aa12.46□□□□□ -0.41
MSH5-204ENST00000375755 COQ3Q9NZJ6 369 aa12.46□□□□□ -0.41
MSH5-204ENST00000375755 SPASTQ9UBP0 616 aa12.46□□□□□ -0.41
MSH5-204ENST00000375755 KCNN3Q9UGI6 736 aa12.46□□□□□ -0.41
MSH5-204ENST00000375755 ZNF490Q9ULM2 529 aaPredicted RBP12.46□□□□□ -0.41
MSH5-204ENST00000375755 SAMD4AQ9UPU9 718 aaKnown RBP12.46□□□□□ -0.41
MSH5-204ENST00000375755 RAI2Q9Y5P3 530 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms