RNA–Protein interactions for RNA: ENST00000375750.7

MSH5-203, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 2,775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-203ENST00000375750 TMEM229AB2RXF0 380 aa14.63□□□□□ -0.07
MSH5-203ENST00000375750 SCN2BO60939 215 aa14.63□□□□□ -0.07
MSH5-203ENST00000375750 COX7A2P14406 83 aa14.63□□□□□ -0.07
MSH5-203ENST00000375750 ITGALP20701 1170 aa14.63□□□□□ -0.07
MSH5-203ENST00000375750 CASP3P42574 277 aa14.63□□□□□ -0.07
MSH5-203ENST00000375750 CDH18Q13634 790 aa14.63□□□□□ -0.07
MSH5-203ENST00000375750 DUOXA1Q1HG43 343 aa14.63□□□□□ -0.07
MSH5-203ENST00000375750 FAHD1Q6P587 224 aa14.63□□□□□ -0.07
MSH5-203ENST00000375750 PSRC1Q6PGN9 363 aaPredicted RBP14.63□□□□□ -0.07
MSH5-203ENST00000375750 CCBE1Q6UXH8 406 aaPredicted RBP14.63□□□□□ -0.07
MSH5-203ENST00000375750 CERS6Q6ZMG9 384 aa14.63□□□□□ -0.07
MSH5-203ENST00000375750 CBLL1Q75N03 491 aa14.63□□□□□ -0.07
MSH5-203ENST00000375750 SLC5A8Q8N695 610 aa14.63□□□□□ -0.07
MSH5-203ENST00000375750 SP7Q8TDD2 431 aaPredicted RBP14.63□□□□□ -0.07
MSH5-203ENST00000375750 C7orf34Q96L11 122 aa14.63□□□□□ -0.07
MSH5-203ENST00000375750 MCOLN1Q9GZU1 580 aa14.63□□□□□ -0.07
MSH5-203ENST00000375750 ASAH2Q9NR71 780 aa14.63□□□□□ -0.07
MSH5-203ENST00000375750 GRXCR1A8MXD5 290 aa14.63□□□□□ -0.07
MSH5-203ENST00000375750 MAGEB17A8MXT2 336 aa14.63□□□□□ -0.07
MSH5-203ENST00000375750 KCNJ10P78508 379 aa14.63□□□□□ -0.07
MSH5-203ENST00000375750 B4GALNT1Q00973 533 aa14.63□□□□□ -0.07
MSH5-203ENST00000375750 ZNF648Q5T619 568 aaPredicted RBP14.63□□□□□ -0.07
MSH5-203ENST00000375750 EIF3MQ7L2H7 374 aaKnown RBP14.63□□□□□ -0.07
MSH5-203ENST00000375750 CYP2U1Q7Z449 544 aa14.63□□□□□ -0.07
MSH5-203ENST00000375750 SERPINA11Q86U17 422 aa14.63□□□□□ -0.07
MSH5-203ENST00000375750 SPPL2AQ8TCT8 520 aa14.63□□□□□ -0.07
MSH5-203ENST00000375750 UTP15Q8TED0 518 aaKnown RBP14.63□□□□□ -0.07
MSH5-203ENST00000375750 HERVK_113Q902F9 699 aa14.63□□□□□ -0.07
MSH5-203ENST00000375750 NIPSNAP1Q9BPW8 284 aa14.63□□□□□ -0.07
MSH5-203ENST00000375750 ERVK13-1Q9NX77 482 aa14.63□□□□□ -0.07
MSH5-203ENST00000375750 PSORS1C1Q9UIG5 152 aa14.63□□□□□ -0.07
MSH5-203ENST00000375750 IRAK3Q9Y616 596 aa14.63□□□□□ -0.07
MSH5-203ENST00000375750 HSPE1-MOB4S4R3N1 261 aa14.63□□□□□ -0.07
MSH5-203ENST00000375750 LINC00854A0A1B0GVQ3 168 aa14.62□□□□□ -0.07
MSH5-203ENST00000375750 LINC01553A4QN01 128 aa14.62□□□□□ -0.07
MSH5-203ENST00000375750 J3KTA2 159 aa14.62□□□□□ -0.07
MSH5-203ENST00000375750 CTDSP2O14595 271 aa14.62□□□□□ -0.07
MSH5-203ENST00000375750 NUAK1O60285 661 aa14.62□□□□□ -0.07
MSH5-203ENST00000375750 CYP7B1O75881 506 aa14.62□□□□□ -0.07
MSH5-203ENST00000375750 EPN2O95208 641 aa14.62□□□□□ -0.07
MSH5-203ENST00000375750 COPZ1P61923 177 aa14.62□□□□□ -0.07
MSH5-203ENST00000375750 CDC20Q12834 499 aa14.62□□□□□ -0.07
MSH5-203ENST00000375750 CAMK1Q14012 370 aa14.62□□□□□ -0.07
MSH5-203ENST00000375750 HJURPQ8NCD3 748 aaPredicted RBP14.62□□□□□ -0.07
MSH5-203ENST00000375750 ZNF675Q8TD23 568 aa14.62□□□□□ -0.07
MSH5-203ENST00000375750 TMEM121BQ9BXQ6 578 aaPredicted RBP14.62□□□□□ -0.07
MSH5-203ENST00000375750 MMP27Q9H306 513 aa14.62□□□□□ -0.07
MSH5-203ENST00000375750 ERVW-1Q9UQF0 538 aa14.62□□□□□ -0.07
MSH5-203ENST00000375750 NOX1Q9Y5S8 564 aa14.62□□□□□ -0.07
MSH5-203ENST00000375750 OBSL1O75147 1896 aa14.62□□□□□ -0.07
MSH5-203ENST00000375750 TRAV19A0A0A6YYK7 116 aa14.62□□□□□ -0.07
MSH5-203ENST00000375750 LEFTY2O00292 366 aa14.62□□□□□ -0.07
MSH5-203ENST00000375750 GCM2O75603 506 aaPredicted RBP14.62□□□□□ -0.07
MSH5-203ENST00000375750 C9P02748 559 aa14.62□□□□□ -0.07
MSH5-203ENST00000375750 PRPS2P11908 318 aa14.62□□□□□ -0.07
MSH5-203ENST00000375750 CD22P20273 847 aa14.62□□□□□ -0.07
MSH5-203ENST00000375750 RPS3P23396 243 aaKnown RBP eCLIP14.62□□□□□ -0.07
MSH5-203ENST00000375750 SLC7A9P82251 487 aa14.62□□□□□ -0.07
MSH5-203ENST00000375750 BOP1Q14137 746 aaKnown RBP14.62□□□□□ -0.07
MSH5-203ENST00000375750 TTLL9Q3SXZ7 439 aa14.62□□□□□ -0.07
MSH5-203ENST00000375750 ZNF697Q5TEC3 545 aa14.62□□□□□ -0.07
MSH5-203ENST00000375750 ANGPTL8Q6UXH0 198 aa14.62□□□□□ -0.07
MSH5-203ENST00000375750 SERPINA13PQ6UXR4 307 aa14.62□□□□□ -0.07
MSH5-203ENST00000375750 ZNF852Q6ZMS4 543 aa14.62□□□□□ -0.07
MSH5-203ENST00000375750 KIAA1958Q8N8K9 716 aa14.62□□□□□ -0.07
MSH5-203ENST00000375750 UBTD2Q8WUN7 234 aa14.62□□□□□ -0.07
MSH5-203ENST00000375750 TXNDC15Q96J42 360 aa14.62□□□□□ -0.07
MSH5-203ENST00000375750 OR5M11Q96RB7 305 aa14.62□□□□□ -0.07
MSH5-203ENST00000375750 PITX2Q99697 317 aa14.62□□□□□ -0.07
MSH5-203ENST00000375750 P2RY13Q9BPV8 354 aa14.62□□□□□ -0.07
MSH5-203ENST00000375750 TPK1Q9H3S4 243 aa14.62□□□□□ -0.07
MSH5-203ENST00000375750 SP140LQ9H930 580 aa14.62□□□□□ -0.07
MSH5-203ENST00000375750 CCNB1IP1Q9NPC3 277 aa14.62□□□□□ -0.07
MSH5-203ENST00000375750 RAPGEFL1Q9UHV5 662 aa14.62□□□□□ -0.07
MSH5-203ENST00000375750 CD84Q9UIB8 345 aa14.62□□□□□ -0.07
MSH5-203ENST00000375750 LSM7Q9UK45 103 aaKnown RBP14.62□□□□□ -0.07
MSH5-203ENST00000375750 FZD4Q9ULV1 537 aa14.62□□□□□ -0.07
MSH5-203ENST00000375750 KMOO15229 486 aa14.62□□□□□ -0.07
MSH5-203ENST00000375750 GRM6O15303 877 aa14.62□□□□□ -0.07
MSH5-203ENST00000375750 ASNA1O43681 348 aa14.62□□□□□ -0.07
MSH5-203ENST00000375750 PCDH7O60245 1069 aa14.62□□□□□ -0.07
MSH5-203ENST00000375750 LATS1O95835 1130 aa14.62□□□□□ -0.07
MSH5-203ENST00000375750 AOAHP28039 575 aa14.62□□□□□ -0.07
MSH5-203ENST00000375750 ITGA1P56199 1179 aa14.62□□□□□ -0.07
MSH5-203ENST00000375750 GAB1Q13480 694 aa14.62□□□□□ -0.07
MSH5-203ENST00000375750 SMU1Q2TAY7 513 aa14.62□□□□□ -0.07
MSH5-203ENST00000375750 ARMCX4Q5H9R4 360 aa14.62□□□□□ -0.07
MSH5-203ENST00000375750 LINC00299Q6ZSB3 139 aa14.62□□□□□ -0.07
MSH5-203ENST00000375750 HTR3DQ70Z44 454 aa14.62□□□□□ -0.07
MSH5-203ENST00000375750 SLC46A3Q7Z3Q1 461 aa14.62□□□□□ -0.07
MSH5-203ENST00000375750 NAGSQ8N159 534 aa14.62□□□□□ -0.07
MSH5-203ENST00000375750 CYP4Z2PQ8N1L4 340 aa14.62□□□□□ -0.07
MSH5-203ENST00000375750 DNAJC22Q8N4W6 341 aa14.62□□□□□ -0.07
MSH5-203ENST00000375750 OR9Q2Q8NGE9 314 aa14.62□□□□□ -0.07
MSH5-203ENST00000375750 TESCQ96BS2 214 aa14.62□□□□□ -0.07
MSH5-203ENST00000375750 HRASLS5Q96KN8 279 aa14.62□□□□□ -0.07
MSH5-203ENST00000375750 TPT1P8Q9HAU6 139 aa14.62□□□□□ -0.07
MSH5-203ENST00000375750 CPNE5Q9HCH3 593 aa14.62□□□□□ -0.07
MSH5-203ENST00000375750 ZNF226Q9NYT6 803 aa14.62□□□□□ -0.07
MSH5-203ENST00000375750 KLHL3Q9UH77 587 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms