RNA–Protein interactions for RNA: ENST00000375604.6

MCF2L-203, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS P3 TSL 2 BASIC

Gene MCF2L, Length 6,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-203ENST00000375604 CDKL1Q00532 357 aa16.61■□□□□ 0.25
MCF2L-203ENST00000375604 NLGN4YQ8NFZ3 816 aaPredicted RBP16.61■□□□□ 0.25
MCF2L-203ENST00000375604 NKX1-2Q9UD57 310 aaPredicted RBP16.61■□□□□ 0.25
MCF2L-203ENST00000375604 FARSAQ9Y285 508 aaKnown RBP16.61■□□□□ 0.25
MCF2L-203ENST00000375604 CD36P16671 472 aa16.61■□□□□ 0.25
MCF2L-203ENST00000375604 TGFBIQ15582 683 aa16.61■□□□□ 0.25
MCF2L-203ENST00000375604 PDCD4Q53EL6 469 aaKnown RBP16.61■□□□□ 0.25
MCF2L-203ENST00000375604 DPY19L3Q6ZPD9 716 aa16.61■□□□□ 0.25
MCF2L-203ENST00000375604 ZNF101Q8IZC7 436 aa16.61■□□□□ 0.25
MCF2L-203ENST00000375604 GLB1L3Q8NCI6 653 aaPredicted RBP16.61■□□□□ 0.25
MCF2L-203ENST00000375604 CGREF1Q99674 301 aa16.61■□□□□ 0.25
MCF2L-203ENST00000375604 PKP2Q99959 881 aa16.61■□□□□ 0.25
MCF2L-203ENST00000375604 TEX264Q9Y6I9 313 aa16.61■□□□□ 0.25
MCF2L-203ENST00000375604 PRORSD1PA6NEY8 169 aa16.61■□□□□ 0.25
MCF2L-203ENST00000375604 ZNF878C9JN71 531 aa16.61■□□□□ 0.25
MCF2L-203ENST00000375604 ECHS1P30084 290 aa16.61■□□□□ 0.25
MCF2L-203ENST00000375604 GBX2P52951 348 aaPredicted RBP16.61■□□□□ 0.25
MCF2L-203ENST00000375604 GALNT2Q10471 571 aa16.61■□□□□ 0.25
MCF2L-203ENST00000375604 TXNDC5Q8NBS9 432 aaKnown RBP16.61■□□□□ 0.25
MCF2L-203ENST00000375604 M0QX08 132 aa16.61■□□□□ 0.25
MCF2L-203ENST00000375604 OR12D1P0DN82 309 aa16.61■□□□□ 0.25
MCF2L-203ENST00000375604 FCHO2Q0JRZ9 810 aa16.61■□□□□ 0.25
MCF2L-203ENST00000375604 ZFP69Q49AA0 526 aa16.61■□□□□ 0.25
MCF2L-203ENST00000375604 ABCA11PQ4W5N1 156 aa16.61■□□□□ 0.25
MCF2L-203ENST00000375604 RTP2Q5QGT7 225 aa16.61■□□□□ 0.25
MCF2L-203ENST00000375604 OR4N5Q8IXE1 308 aa16.61■□□□□ 0.25
MCF2L-203ENST00000375604 SPERTQ8NA61 448 aa16.61■□□□□ 0.25
MCF2L-203ENST00000375604 SSU72Q9NP77 194 aaKnown RBP16.61■□□□□ 0.25
MCF2L-203ENST00000375604 ZNF221Q9UK13 617 aa16.61■□□□□ 0.25
MCF2L-203ENST00000375604 PLCL2Q9UPR0 1127 aa16.61■□□□□ 0.25
MCF2L-203ENST00000375604 ZSCAN5BA6NJL1 495 aa16.61■□□□□ 0.25
MCF2L-203ENST00000375604 PXNP49023 591 aaPredicted RBP16.61■□□□□ 0.25
MCF2L-203ENST00000375604 RPS3AP61247 264 aaKnown RBP16.61■□□□□ 0.25
MCF2L-203ENST00000375604 GJD3Q8N144 294 aa16.61■□□□□ 0.25
MCF2L-203ENST00000375604 JAGN1Q8N5M9 183 aa16.61■□□□□ 0.25
MCF2L-203ENST00000375604 RAD9AQ99638 391 aa16.61■□□□□ 0.25
MCF2L-203ENST00000375604 SERTAD3Q9UJW9 196 aa16.61■□□□□ 0.25
MCF2L-203ENST00000375604 CDC14AQ9UNH5 594 aa16.61■□□□□ 0.25
MCF2L-203ENST00000375604 H1F0P07305 194 aaKnown RBP16.6■□□□□ 0.25
MCF2L-203ENST00000375604 ZNF41P51814 821 aaPredicted RBP16.6■□□□□ 0.25
MCF2L-203ENST00000375604 ZNF678Q5SXM1 525 aa16.6■□□□□ 0.25
MCF2L-203ENST00000375604 FBXL20Q96IG2 436 aa16.6■□□□□ 0.25
MCF2L-203ENST00000375604 MAGEE1Q9HCI5 957 aa16.6■□□□□ 0.25
MCF2L-203ENST00000375604 DNAJC27Q9NZQ0 273 aa16.6■□□□□ 0.25
MCF2L-203ENST00000375604 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.6■□□□□ 0.25
MCF2L-203ENST00000375604 A0A1W2PPK0 400 aa16.6■□□□□ 0.25
MCF2L-203ENST00000375604 E7EQ34 232 aa16.6■□□□□ 0.25
MCF2L-203ENST00000375604 STC1P52823 247 aa16.6■□□□□ 0.25
MCF2L-203ENST00000375604 CDK6Q00534 326 aa16.6■□□□□ 0.25
MCF2L-203ENST00000375604 DECR1Q16698 335 aa16.6■□□□□ 0.25
MCF2L-203ENST00000375604 IER5LQ5T953 404 aa16.6■□□□□ 0.25
MCF2L-203ENST00000375604 AURKBQ96GD4 344 aaPredicted RBP16.6■□□□□ 0.25
MCF2L-203ENST00000375604 TAS2R1Q9NYW7 299 aa16.6■□□□□ 0.25
MCF2L-203ENST00000375604 MAFFQ9ULX9 164 aa16.6■□□□□ 0.25
MCF2L-203ENST00000375604 DLGAP4Q9Y2H0 992 aa16.6■□□□□ 0.25
MCF2L-203ENST00000375604 TLX2O43763 284 aaPredicted RBP16.6■□□□□ 0.25
MCF2L-203ENST00000375604 NDUFS1P28331 727 aa16.6■□□□□ 0.25
MCF2L-203ENST00000375604 MERTKQ12866 999 aa16.6■□□□□ 0.25
MCF2L-203ENST00000375604 SLC10A2Q12908 348 aaPredicted RBP16.6■□□□□ 0.25
MCF2L-203ENST00000375604 TMEM107Q6UX40 140 aa16.6■□□□□ 0.25
MCF2L-203ENST00000375604 MARCH9Q86YJ5 346 aa16.6■□□□□ 0.25
MCF2L-203ENST00000375604 SNX29P2Q8IUI4 249 aa16.6■□□□□ 0.25
MCF2L-203ENST00000375604 UHRF1Q96T88 793 aaPredicted RBP16.6■□□□□ 0.25
MCF2L-203ENST00000375604 PLEKHA6Q9Y2H5 1048 aa16.6■□□□□ 0.25
MCF2L-203ENST00000375604 PEX12O00623 359 aa16.6■□□□□ 0.25
MCF2L-203ENST00000375604 CLIC3O95833 236 aa16.6■□□□□ 0.25
MCF2L-203ENST00000375604 RPS26P62854 115 aaKnown RBP16.6■□□□□ 0.25
MCF2L-203ENST00000375604 ZNF782Q6ZMW2 699 aaPredicted RBP16.6■□□□□ 0.25
MCF2L-203ENST00000375604 SMPDL3AQ92484 453 aa16.6■□□□□ 0.25
MCF2L-203ENST00000375604 CCDC115Q96NT0 180 aa16.6■□□□□ 0.25
MCF2L-203ENST00000375604 SMURF2Q9HAU4 748 aa16.6■□□□□ 0.25
MCF2L-203ENST00000375604 SDHAF3Q9NRP4 125 aa16.6■□□□□ 0.25
MCF2L-203ENST00000375604 GRHPRQ9UBQ7 328 aa16.6■□□□□ 0.25
MCF2L-203ENST00000375604 ZNF69Q9UC07 566 aa16.6■□□□□ 0.25
MCF2L-203ENST00000375604 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.6■□□□□ 0.25
MCF2L-203ENST00000375604 ERN2Q76MJ5 926 aaKnown RBP16.6■□□□□ 0.25
MCF2L-203ENST00000375604 DDX1Q92499 740 aaKnown RBP16.6■□□□□ 0.25
MCF2L-203ENST00000375604 LRCH3Q96II8 777 aa16.6■□□□□ 0.25
MCF2L-203ENST00000375604 HAPLN2Q9GZV7 340 aa16.6■□□□□ 0.25
MCF2L-203ENST00000375604 IRF2BPLQ9H1B7 796 aa16.6■□□□□ 0.25
MCF2L-203ENST00000375604 ADAMTS10Q9H324 1103 aa16.6■□□□□ 0.25
MCF2L-203ENST00000375604 MTG2Q9H4K7 406 aa16.6■□□□□ 0.25
MCF2L-203ENST00000375604 MBD2Q9UBB5 411 aa16.6■□□□□ 0.25
MCF2L-203ENST00000375604 RORCP51449 518 aa16.59■□□□□ 0.25
MCF2L-203ENST00000375604 CLRN1P58418 232 aa16.59■□□□□ 0.25
MCF2L-203ENST00000375604 ARFRP1Q13795 201 aa16.59■□□□□ 0.25
MCF2L-203ENST00000375604 PIGWQ7Z7B1 504 aa16.59■□□□□ 0.25
MCF2L-203ENST00000375604 C2CD4AQ8NCU7 369 aaPredicted RBP16.59■□□□□ 0.25
MCF2L-203ENST00000375604 NPY6RQ99463 290 aa16.59■□□□□ 0.25
MCF2L-203ENST00000375604 DUXAA6NLW8 204 aa16.59■□□□□ 0.25
MCF2L-203ENST00000375604 SOX1O00570 391 aaPredicted RBP16.59■□□□□ 0.25
MCF2L-203ENST00000375604 OR7A10O76100 309 aa16.59■□□□□ 0.25
MCF2L-203ENST00000375604 DNAJA1P31689 397 aaKnown RBP16.59■□□□□ 0.25
MCF2L-203ENST00000375604 GABRA3P34903 492 aa16.59■□□□□ 0.25
MCF2L-203ENST00000375604 ZNF805Q5CZA5 627 aa16.59■□□□□ 0.25
MCF2L-203ENST00000375604 SLC39A5Q6ZMH5 540 aa16.59■□□□□ 0.25
MCF2L-203ENST00000375604 OR8S1Q8NH09 359 aa16.59■□□□□ 0.25
MCF2L-203ENST00000375604 SGCDQ92629 289 aa16.59■□□□□ 0.25
MCF2L-203ENST00000375604 DERL2Q9GZP9 239 aa16.59■□□□□ 0.25
MCF2L-203ENST00000375604 ETAA1Q9NY74 926 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms