RNA–Protein interactions for RNA: ENST00000375340.10

SMC1A-202, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 1 (best) BASIC

Gene SMC1A, Length 9,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-202ENST00000375340 ZNF69Q9UC07 566 aa6.33□□□□□ -1.4
SMC1A-202ENST00000375340 RPL36Q9Y3U8 105 aaKnown RBP6.33□□□□□ -1.4
SMC1A-202ENST00000375340 SSC5DA1L4H1 1573 aa6.33□□□□□ -1.4
SMC1A-202ENST00000375340 KRBA1A5PL33 1030 aa6.33□□□□□ -1.4
SMC1A-202ENST00000375340 RIIAD1A6NNX1 92 aa6.33□□□□□ -1.4
SMC1A-202ENST00000375340 A8MU76 341 aa6.33□□□□□ -1.4
SMC1A-202ENST00000375340 PORP16435 677 aaPredicted RBP6.33□□□□□ -1.4
SMC1A-202ENST00000375340 SLC6A4P31645 630 aa6.33□□□□□ -1.4
SMC1A-202ENST00000375340 CDK6Q00534 326 aa6.33□□□□□ -1.4
SMC1A-202ENST00000375340 ZNHIT3Q15649 155 aaPredicted RBP6.33□□□□□ -1.4
SMC1A-202ENST00000375340 ADAMTS15Q8TE58 950 aa6.33□□□□□ -1.4
SMC1A-202ENST00000375340 TSEN15Q8WW01 171 aaKnown RBP6.33□□□□□ -1.4
SMC1A-202ENST00000375340 KCTD7Q96MP8 289 aa6.33□□□□□ -1.4
SMC1A-202ENST00000375340 RGPD3A6NKT7 1758 aaPredicted RBP6.33□□□□□ -1.4
SMC1A-202ENST00000375340 RGPD4Q7Z3J3 1758 aa6.33□□□□□ -1.4
SMC1A-202ENST00000375340 TRAV6A0A075B6T7 132 aa6.33□□□□□ -1.4
SMC1A-202ENST00000375340 SCAMP2O15127 329 aaKnown RBP6.33□□□□□ -1.4
SMC1A-202ENST00000375340 EPHX1P07099 455 aa6.33□□□□□ -1.4
SMC1A-202ENST00000375340 MRPL3P09001 348 aaKnown RBP6.33□□□□□ -1.4
SMC1A-202ENST00000375340 ACRP10323 421 aa6.33□□□□□ -1.4
SMC1A-202ENST00000375340 TCEA1P23193 301 aaKnown RBP6.33□□□□□ -1.4
SMC1A-202ENST00000375340 TIE1P35590 1138 aa6.33□□□□□ -1.4
SMC1A-202ENST00000375340 SLC15A1P46059 708 aa6.33□□□□□ -1.4
SMC1A-202ENST00000375340 RPL6Q02878 288 aaKnown RBP6.33□□□□□ -1.4
SMC1A-202ENST00000375340 ATAT1Q5SQI0 421 aa6.33□□□□□ -1.4
SMC1A-202ENST00000375340 IER5LQ5T953 404 aa6.33□□□□□ -1.4
SMC1A-202ENST00000375340 SCD5Q86SK9 330 aa6.33□□□□□ -1.4
SMC1A-202ENST00000375340 PARGQ86W56 976 aa6.33□□□□□ -1.4
SMC1A-202ENST00000375340 IFNL1Q8IU54 200 aa6.33□□□□□ -1.4
SMC1A-202ENST00000375340 ABHD11Q8NFV4 315 aa6.33□□□□□ -1.4
SMC1A-202ENST00000375340 CD200R1Q8TD46 325 aa6.33□□□□□ -1.4
SMC1A-202ENST00000375340 KCNJ9Q92806 393 aa6.33□□□□□ -1.4
SMC1A-202ENST00000375340 GAL3ST1Q99999 423 aa6.33□□□□□ -1.4
SMC1A-202ENST00000375340 MRPS30Q9NP92 439 aaKnown RBP6.33□□□□□ -1.4
SMC1A-202ENST00000375340 LRRC72A6NJI9 287 aa6.32□□□□□ -1.4
SMC1A-202ENST00000375340 M0QX08 132 aa6.32□□□□□ -1.4
SMC1A-202ENST00000375340 TSPAN4O14817 238 aa6.32□□□□□ -1.4
SMC1A-202ENST00000375340 HIST1H2ABP04908 130 aa6.32□□□□□ -1.4
SMC1A-202ENST00000375340 ALPPL2P10696 532 aa6.32□□□□□ -1.4
SMC1A-202ENST00000375340 OMPP47874 163 aa6.32□□□□□ -1.4
SMC1A-202ENST00000375340 SLC3A1Q07837 685 aa6.32□□□□□ -1.4
SMC1A-202ENST00000375340 SLC30A6Q6NXT4 461 aa6.32□□□□□ -1.4
SMC1A-202ENST00000375340 HIST3H2AQ7L7L0 130 aa6.32□□□□□ -1.4
SMC1A-202ENST00000375340 RBM12BQ8IXT5 1001 aaKnown RBP6.32□□□□□ -1.4
SMC1A-202ENST00000375340 ZNF655Q8N720 491 aaPredicted RBP6.32□□□□□ -1.4
SMC1A-202ENST00000375340 TRPV1Q8NER1 839 aa6.32□□□□□ -1.4
SMC1A-202ENST00000375340 DNAJB8Q8NHS0 232 aa6.32□□□□□ -1.4
SMC1A-202ENST00000375340 SLC22A17Q8WUG5 538 aa6.32□□□□□ -1.4
SMC1A-202ENST00000375340 HIST1H2ACQ93077 130 aa6.32□□□□□ -1.4
SMC1A-202ENST00000375340 C3orf14Q9HBI5 128 aa6.32□□□□□ -1.4
SMC1A-202ENST00000375340 FNIP2Q9P278 1114 aa6.32□□□□□ -1.4
SMC1A-202ENST00000375340 UTS2RQ9UKP6 389 aa6.32□□□□□ -1.4
SMC1A-202ENST00000375340 GABRQQ9UN88 632 aa6.32□□□□□ -1.4
SMC1A-202ENST00000375340 TMED5Q9Y3A6 229 aa6.32□□□□□ -1.4
SMC1A-202ENST00000375340 PGRMC2O15173 223 aa6.32□□□□□ -1.4
SMC1A-202ENST00000375340 RASGRP1O95267 797 aa6.32□□□□□ -1.4
SMC1A-202ENST00000375340 H1F0P07305 194 aaKnown RBP6.32□□□□□ -1.4
SMC1A-202ENST00000375340 NT5EP21589 574 aa6.32□□□□□ -1.4
SMC1A-202ENST00000375340 VIPR1P32241 457 aa6.32□□□□□ -1.4
SMC1A-202ENST00000375340 SOX3P41225 446 aa6.32□□□□□ -1.4
SMC1A-202ENST00000375340 CRB2Q5IJ48 1285 aa6.32□□□□□ -1.4
SMC1A-202ENST00000375340 ATG9BQ674R7 924 aa6.32□□□□□ -1.4
SMC1A-202ENST00000375340 SHFQ7M4L6 423 aa6.32□□□□□ -1.4
SMC1A-202ENST00000375340 UMODL1-AS1Q8N2C9 162 aa6.32□□□□□ -1.4
SMC1A-202ENST00000375340 KLHL36Q8N4N3 616 aa6.32□□□□□ -1.4
SMC1A-202ENST00000375340 ZFP41Q8N8Y5 198 aa6.32□□□□□ -1.4
SMC1A-202ENST00000375340 RIPOR3Q96MK2 946 aa6.32□□□□□ -1.4
SMC1A-202ENST00000375340 GPR62Q9BZJ7 368 aa6.32□□□□□ -1.4
SMC1A-202ENST00000375340 CERS4Q9HA82 394 aa6.32□□□□□ -1.4
SMC1A-202ENST00000375340 BEX1Q9HBH7 125 aa6.32□□□□□ -1.4
SMC1A-202ENST00000375340 NME7Q9Y5B8 376 aa6.32□□□□□ -1.4
SMC1A-202ENST00000375340 MIA3Q5JRA6 1907 aa6.32□□□□□ -1.4
SMC1A-202ENST00000375340 RB1P06400 928 aa6.32□□□□□ -1.4
SMC1A-202ENST00000375340 GJA5P36382 358 aa6.32□□□□□ -1.4
SMC1A-202ENST00000375340 TXNL4AP83876 142 aaKnown RBP6.32□□□□□ -1.4
SMC1A-202ENST00000375340 CAP1Q01518 475 aa6.32□□□□□ -1.4
SMC1A-202ENST00000375340 TAF13Q15543 124 aa6.32□□□□□ -1.4
SMC1A-202ENST00000375340 AAK1Q2M2I8 961 aa6.32□□□□□ -1.4
SMC1A-202ENST00000375340 GPRC6AQ5T6X5 926 aa6.32□□□□□ -1.4
SMC1A-202ENST00000375340 DCDC5Q6ZRR9 648 aa6.32□□□□□ -1.4
SMC1A-202ENST00000375340 ZNF367Q7RTV3 350 aa6.32□□□□□ -1.4
SMC1A-202ENST00000375340 TMCO2Q7Z6W1 182 aaPredicted RBP6.32□□□□□ -1.4
SMC1A-202ENST00000375340 ZBED3Q96IU2 234 aaPredicted RBP6.32□□□□□ -1.4
SMC1A-202ENST00000375340 ANKRA2Q9H9E1 313 aa6.32□□□□□ -1.4
SMC1A-202ENST00000375340 BRD7Q9NPI1 651 aa6.32□□□□□ -1.4
SMC1A-202ENST00000375340 ERVK-11Q9UQG0 969 aa6.32□□□□□ -1.4
SMC1A-202ENST00000375340 PCSK6P29122 969 aa6.32□□□□□ -1.4
SMC1A-202ENST00000375340 CCR8P51685 355 aa6.32□□□□□ -1.4
SMC1A-202ENST00000375340 FAM214AQ32MH5 1076 aa6.32□□□□□ -1.4
SMC1A-202ENST00000375340 PRAMEF14Q5SWL7 426 aa6.32□□□□□ -1.4
SMC1A-202ENST00000375340 PRAMEF13Q5VWM6 474 aa6.32□□□□□ -1.4
SMC1A-202ENST00000375340 ALKAL1Q6UXT8 129 aa6.32□□□□□ -1.4
SMC1A-202ENST00000375340 CHERPQ8IWX8 916 aaKnown RBP6.32□□□□□ -1.4
SMC1A-202ENST00000375340 HOMEZQ8IX15 550 aa6.32□□□□□ -1.4
SMC1A-202ENST00000375340 SCAIQ8N9R8 606 aa6.32□□□□□ -1.4
SMC1A-202ENST00000375340 KCT2Q8NC54 265 aa6.32□□□□□ -1.4
SMC1A-202ENST00000375340 PIP5K1AQ99755 562 aa6.32□□□□□ -1.4
SMC1A-202ENST00000375340 GINS4Q9BRT9 223 aa6.32□□□□□ -1.4
SMC1A-202ENST00000375340 PCDHGA11Q9Y5H2 935 aa6.32□□□□□ -1.4
SMC1A-202ENST00000375340 CD8B2A6NJW9 211 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms